Haliotis rubra (blacklip abalone): 124276517
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Entry
124276517 CDS
T07967
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124276517
09123 Folding, sorting and degradation
03018 RNA degradation
124276517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124276517
03041 Spliceosome [BR:
hrj03041
]
124276517
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124276517
mRNA degradation factors
5'-3' decay
Lsm complex
124276517
Spliceosome [BR:
hrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124276517
Complex C
U2 snRNP components
124276517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
AceK_regulatory
DUF150_C
Motif
Other DBs
NCBI-GeneID:
124276517
NCBI-ProteinID:
XP_046568100
LinkDB
All DBs
Position
Unknown
AA seq
103 aa
AA seq
DB search
MADEQEQQVPAQTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMIMGEVEET
VTTVEIDEETYEEIYKSTKRNIPMLFVRGDGVILVSPPMRTGT
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcaagagcagcaagtacctgcacagacagtcgaagaaccactggatctc
attcgactcagtctggatgagcgtatttatgtgaagatgagaaatgacagggagttgcga
ggcagattgcatgcatatgatcagcatttgaatatgatcatgggagaagttgaagaaaca
gtcacaactgtggagattgatgaggaaacatatgaagaaatctacaagtcaacaaagagg
aacatccccatgctgtttgttcgaggagatggcgtcattcttgtttccccaccgatgaga
acagggacatga
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