Haliotis rubra (blacklip abalone): 124281779
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Entry
124281779 CDS
T07967
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04120
Ubiquitin mediated proteolysis
hrj04140
Autophagy - animal
hrj04144
Endocytosis
hrj04517
IgSF CAM signaling
hrj04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124281779
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124281779
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124281779
04140 Autophagy - animal
124281779
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124281779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124281779
04121 Ubiquitin system [BR:
hrj04121
]
124281779
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124281779
Membrane trafficking [BR:
hrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124281779
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124281779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_4
U-box
zf-C3HC4_3
zf-rbx1
zf-Nse
RING_XB3-XBAT31
zf-RING_5
Imm7
CEP152_CC1
zf-TRAF_2
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
124281779
NCBI-ProteinID:
XP_046573707
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MDENEANLGQPSFPSGSDSASFGEGSSSGPAYWYQERTEGFDYDFVPTPDPKYECAICLL
ILREPRQTKCGHRFCRGCITKWLRECDVRCPVDNEPIDERELFADNFAKREILNFKVKCP
NSRQGCEVLATLKKVQEHTDQCPLALVPCPNRCMDILLRRDVPNHVQFNCRRRILQCQNC
QKDVAAEGMEHHLTECPLVQVVCQYCGGDFVKQALSGHHDKDCPTYPISCDFGPLGCSAQ
FDRKMEQEHYVDATVDHQRMLCHGVVTILHKFGIQSLSPASVPALSGGLTPMEMSTSLSA
MGSYINQFQGLTMQDHSHVPNISGSRTPDGQSVKQFNLDSLKTSIDPRQLHRSMSDTLPQ
ASNETVEGAHVSHTSKPSDAEGVHGALSLQGASGLELQSLKNQNMYQDESLARHDQQLVE
IKAKNEMLEKANKELKYKLRYLDNAVQEFEGRACNGQFYWKIKNYHKLREEAEQGINTAL
HSPSFYSNCYGYKLCIRANLNGVDAAKGSHLSIFIHFMQGDWDEILDWPFSGRIVLSVID
QNPICELRNHIAETLIAKPNLAAFQKPVTPRNHKGFGYMEFVALSVLDNADFVRNDTLII
KAQIIPAT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatgaggctaacctcgggcagccatcattcccgagtgggagcgatagcgcg
tcttttggagaggggtcatcgtcggggccagcatattggtatcaagagcggacagagggc
tttgattatgactttgtgccgacccctgaccccaagtatgagtgtgccatctgcctgctc
atcctgcgagaacctcgacagaccaaatgtggtcacaggttctgccgtggctgcatcaca
aaatggctgagggagtgtgatgtccgatgtcctgttgacaatgaaccgatcgacgagcgg
gaattattcgccgacaactttgccaaacgtgaaatccttaacttcaaagtaaagtgtccc
aattcaagacaaggctgtgaggtgctggccactctcaagaaagttcaggaacatacagat
cagtgtcccttagccctagtcccatgtcccaatcgttgtatggacatactcctccgtaga
gatgtcccaaaccatgtacagttcaactgccgtcgcagaatcctacagtgccaaaattgt
cagaaggatgtcgctgctgaaggaatggagcatcatctgacggagtgtccgctcgtacag
gttgtctgtcagtactgtggaggggactttgtcaaacaagcactcagcggacatcatgat
aaggactgtcctacttatccaatatcctgtgacttcggacctcttggatgttctgctcag
tttgaccggaagatggaacaggaacactacgtggatgccacagtcgaccatcaacgcatg
ctctgtcacggtgtggtcaccatcctccataagtttggcatccagagcctctccccagcc
tcagtcccagcgttatcaggcggactcaccccgatggagatgtccacttctctgtcggcc
atgggcagttacatcaatcagttccaaggcctcaccatgcaggatcacagtcatgtcccg
aacatctccggctcacggacaccagatggacagtcggttaaacagttcaacttggattcc
ttgaaaaccagcattgatcctcgtcagcttcatcgaagtatgtccgatacgctgccgcaa
gcttccaacgagactgtggaaggtgctcatgtgagccatacctcaaaaccctctgatgct
gagggtgtgcacggtgctctgtccttgcaaggggcttcgggactagagctccagagtctc
aaaaaccagaacatgtaccaggacgaaagtctggcccgtcatgaccaacagctggttgaa
atcaaagcgaagaatgagatgttggagaaagcaaacaaggaactgaagtacaaactacgt
taccttgacaatgctgtgcaggagttcgaaggccgggcatgcaatggacagttctactgg
aagatcaagaattaccacaaactcagggaggaagcagaacagggcatcaacaccgctctg
cacagtccttctttctattccaactgctatggttacaagttgtgtattagagctaatctg
aatggtgtggatgcagccaaaggaagtcatctttcaatcttcatacatttcatgcaagga
gattgggatgagattctcgactggccattttcaggccggattgttctgtcagtgattgat
cagaaccccatatgtgagctcagaaatcatatcgctgagactcttattgccaaacccaat
ttggcagcttttcaaaaacccgtcacgccaaggaatcacaaaggatttggatatatggaa
tttgtagccttaagcgtgctggataatgcagactttgttaggaatgatacacttatcatt
aaagctcaaattatccctgcaacgtga
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