Haliotis rubra (blacklip abalone): 124290248
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Entry
124290248 CDS
T07967
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrj04040
]
124290248
Ion channels [BR:
hrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124290248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
DUF7535
Caveolin
DUF3734
Motif
Other DBs
NCBI-GeneID:
124290248
NCBI-ProteinID:
XP_046582915
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MSKTMLPSCIVYNSPYSSPSRGLDYGAADKRASTMPSQGSLFTNFEDVQLTDEERVFLNA
AYLGDVGIVRQSLEESGESNLNVNCVDYMGRNALHLAIDSEKLDVIEILLDNLSFNCIEE
ALLHAISKGGTKIVKLVIEHPNFMAGEDRLRRLGGGEAFFRTEEKSQFPPDITPVILAAH
YNNHEIIQMFLSRNHTIEKPHPISCKCSDCVSKQNYDSLKRSRSRLNAYRALASPAYMAL
SSPDPIMTTFELRQEMMKLAEVEKEFKNEYLQMVEQCMNFACELMDLCRGTQEVEAVLSE
SGETTQRDPLARLKQAIRYEEKKFVAHPNCQQHMTSIWYGSEMGFLQSLGWFRKLIYLIL
FLPAIPFMCIAYVFAPNIKFGRIMRCPVTKFITHTTSHICFLILLAAATFRITESGETIT
STTEMNETKYAHLSSEEKIQNILKETLRPASTLITHVQICIVFWILGLLWIECKQVYISG
ARAYTTDYYNLVDFSVLSMYLASYVLRFFTEYQVSEADRTSNGTNRARELLMQQNHTYFH
LLVADIKNPNHRINYFMEASRFHWEANDPEIVSDVLFAIANVISFARTTYLMPAFEVLGP
LQISLGRMIGDITRFMVLFTLVLFAFMVGLHNLYWYYGAQKIKMEINGNLVNAHAAKAFQ
GLRQTFYSLFWSMFGQVSMSDITVMHPEPDGGYVSSVVGVGKGGGGVFKSTLYGSSNQDS
STSIVESVGMYLFGIYHVVIIIVLINMLIAMMSHSFEDIQTDCDVEWKFARTKLWLNYMD
EGSTLPVPFNMIPTPKSFYYVYIFFKDLIKHSKNGFLEYEKNRKQTFLKKRRETVCKTLE
LKPDETSYIDIMHRLVKRYLFKLERAKDETAALKDMGNIRAEEVEFIEAPEVPPPPIPTD
TPSRIPFATPPIPEEEGEDNSKSDGRATAVSKRKSSNRSHHNRRTSMANVPMTTTTLAIP
QLDAIQRSQKLLDVRLQHLQANSKENNRLQDDVEFIRKLMTENQKALCNVVQALANIQGE
IVNLAQCLKPAPRPQSNAIPNAHGQTNAVSSNRASRKRSGPEEDDTKV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagacgatgttaccttcgtgtatcgtgtataattcaccatattcatctccctcc
aggggcctggactacggtgctgccgacaagagggcgtccaccatgccgtcccaggggtct
ctcttcaccaactttgaggacgtgcagctgacggacgaggagcgtgttttcctgaacgct
gcttaccttggtgacgtgggcattgtccgtcagtctcttgaagagagcggagagtcgaac
ctcaacgtcaactgcgtcgactacatgggccgcaatgctctccacttggccatcgacagc
gagaagctggacgtcatcgagatcctccttgacaatctgtccttcaactgcatcgaggag
gcgcttctacacgccatcagcaagggaggaactaagattgtcaagcttgtcatcgaacat
ccgaatttcatggccggagaggataggttgcggcgacttgggggaggggaggcgttcttc
aggacagaggagaaatctcagttcccccctgatataacccccgttattttggccgcacat
tataacaaccacgagattatacagatgtttctctcacggaatcataccatagagaagccc
catcctatctcgtgcaagtgcagtgattgtgtctccaaacagaattatgattcgttaaaa
aggtcaaggtcacgtttgaacgcttaccgtgcgctcgcaagtccagcatacatggcgctg
tccagccccgacccaataatgacgacctttgaactacgacaggaaatgatgaaattagcg
gaagtggaaaaagagttcaagaacgagtaccttcaaatggtggaacagtgtatgaacttc
gcctgtgagctgatggacttgtgtcggggcacacaggaggtggaggcggtgctcagtgag
agtggggagacaacccagagagaccccctcgccagactcaaacaggccattcggtatgag
gagaagaagttcgtggcccaccccaactgccagcagcacatgaccagcatctggtacggc
tctgagatgggattcttgcagtcgctcggctggttccgcaaactcatatatctcatcctc
ttccttcccgccattccattcatgtgtatagcatatgtcttcgcgcctaacatcaagttt
gggcgcatcatgcgctgcccggtgacgaagttcatcacgcacacgacgtcacacatctgt
ttccttatcctcctggcggccgccacgttccgcatcaccgagtcaggggagacaatcacc
tccacgactgagatgaatgaaaccaagtacgcccatctcagcagcgaggagaagatacag
aatatcttgaaggaaaccctccgcccagccagtactctcatcactcatgtgcagatctgt
atagtattttggatattaggtcttctatggattgaatgcaaacaagtgtacatctcagga
gcccgggcttacaccaccgactattataacttagttgattttagtgtcttatctatgtat
ctagcgtcctacgttctacggttcttcacggagtaccaggtatcggaggctgacaggacg
tcgaatggcacaaatcgggcgagagaactccttatgcaacaaaaccacacatacttccat
cttctggttgctgatatcaagaacccgaaccacaggatcaattacttcatggaggcatca
cggttccattgggaagcaaacgaccctgagattgtctcggacgtcttgttcgccattgcc
aacgtcatcagcttcgcgcgcaccacctacctcatgccagccttcgaggtgctgggcccc
ctgcagatatcccttgggcgcatgatcggcgatatcaccaggttcatggtgctgtttacc
ctggtactcttcgccttcatggtgggtctgcacaacttgtactggtactacggagcgcag
aaaatcaagatggagattaatggcaatctcgtcaacgcccacgcagcgaaagcattccaa
gggttgcgacagacgttctacagcctgttctggtccatgttcggccaagtgagcatgagc
gacatcaccgtcatgcacccggaacctgatggaggctatgtctccagtgttgtgggcgtc
ggcaagggaggaggcggagtgttcaagtccaccttgtacgggtcgtcgaatcaggacagc
agcacgtccatcgttgagagtgtcgggatgtacctattcggcatctaccacgtcgtcatc
atcatcgtcctcattaacatgctcatcgctatgatgagccactccttcgaagacattcag
actgactgcgacgtggagtggaagtttgcccgaacgaagctgtggctgaactacatggac
gagggcagcaccctgccggtccccttcaacatgatccccacccccaagtccttctactat
gtgtatatattctttaaagacttgataaaacatagcaaaaacggattcctagaatatgaa
aagaatagaaagcagacgtttcttaagaaacgtcgcgagaccgtttgcaaaacgctggaa
ctaaagcctgatgagacgtcatatatagacatcatgcataggctggtaaagagatacctc
ttcaagctggagagagctaaagatgaaactgcagcactaaaagacatgggtaacatacga
gcggaggaggtggagttcatagaagccccagaagtgcccccgccgccaataccgaccgat
acgcctagccggatacccttcgccacgccccctatacccgaggaggaaggggaggataac
tctaaatctgacggtcgggccaccgccgtgtcaaagaggaagagcagtaacaggagccat
cacaaccggcgaacgtccatggccaacgttcccatgacaacaacgaccctggctatcccc
cagctggacgctatccagaggtcacagaagctccttgatgtgcggctccagcacctacag
gcgaacagcaaggagaacaaccgtctccaggacgatgtagagttcatacgcaagttgatg
acggagaaccaaaaggctttgtgcaatgtggtgcaggctttggccaacattcagggcgaa
attgtcaacttggctcagtgcctaaagccagcaccgaggccccagtcaaacgccattcct
aacgctcatggtcagactaacgctgtgtcgtccaatcgtgcttccaggaagaggtcgggt
cctgaggaggacgacaccaaggtctga
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integrated database retrieval system
