Haliotis rubra (blacklip abalone): 124291770
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Entry
124291770 CDS
T07967
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04120
Ubiquitin mediated proteolysis
hrj04140
Autophagy - animal
hrj04144
Endocytosis
hrj04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124291770
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124291770
04140 Autophagy - animal
124291770
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124291770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124291770
04121 Ubiquitin system [BR:
hrj04121
]
124291770
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124291770
Membrane trafficking [BR:
hrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124291770
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
124291770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
TRAF3_RING
zf-Nse
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
124291770
NCBI-ProteinID:
XP_046584797
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSHEEVSVGEIHGFDHDFDPQVDRKYQCPICLAVLREAVQTSCGHRFCEECLKGVIKART
CAKCPVDNRWFRVRGEVFPDIATRREILSLTVKCDYNKGEDRCQWKGELRELQEHKDTCQ
MAPHTLRVQLWTDRDPRRSGRPHGDLQEKTSRVMHHLLECEKFPVTCTVCGAVGILRKNI
PDHIEQDCPLVEVKCTFNRLGCKAEEKRQNLQKHNKECWQQHLALMADNELLLRSDMHKL
RITVESLTNDVEDLKDLAVRQEVIMKIQRRQIRKLRGESASDAVSTTSDEDVNDAATNTI
TMEMDDDSANIS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgaggaagtcagtgttggggagattcacggttttgaccacgactttgacccc
caagtagaccggaagtaccagtgcccgatctgtctggcggtgttacgggaagcggttcag
acttcctgtggacacaggttctgtgaagagtgtttgaaaggcgtcatcaaggcaagaacg
tgtgccaaatgtccagttgacaacagatggttcagagttcgaggagaagtgtttcccgac
atcgccacccgacgtgaaatcttgtccttgacagtaaagtgcgactacaacaaaggtgaa
gaccgatgccagtggaagggggaactccgagaactccaggagcacaaggacacctgccaa
atggccccccataccttgcgagtacagttgtggactgaccgtgacccgaggcgaagtggc
cgtccacatggcgacttgcaggagaagaccagtcgcgtgatgcaccacctgctggagtgt
gagaagttcccggtaacgtgcactgtgtgtggagctgtgggcattctccggaagaacatc
cccgaccacatcgagcaggactgccctctggtggaggttaaatgcaccttcaacagactg
gggtgcaaggccgaggaaaaacgccagaacctgcagaagcacaacaaagagtgctggcag
cagcacttggccctgatggcggacaacgagctccttctgcggtctgacatgcataagtta
cgaatcacagtcgagtctctcactaacgatgtagaagatcttaaagatctggccgtgaga
caagaagtcatcatgaagatccaacgtcgacagattcgaaagcttcgaggcgaatccgcc
agtgatgctgtttcaaccacatcggacgaagacgttaacgatgcagcgaccaacaccatc
actatggagatggatgacgacagcgctaacatttcgtga
DBGET
integrated database retrieval system
