Haliotis rubra (blacklip abalone): 124292262
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Entry
124292262 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124292262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124292262
Spliceosome [BR:
hrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124292262
Complex C
U5 SnRNP specific factors
124292262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EFG_C
Roc
MMR_HSR1
Septin
Motif
Other DBs
NCBI-GeneID:
124292262
NCBI-ProteinID:
XP_046585280
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MDADLYDEFGNYIGPELDSDDDDDDDEDDRDDEEYMDRDDDDDGDHDDMDDQPEMSVVLH
EDKKYYPTAEEVYGPDVETIVQEEDTQPLTEPIIAPVKKKKFSMAEQDLPETTYNMEFLA
DLMDSPELIRNVTLCGHLHHGKTSFVDCLLEQTHPDIQGRADKDMRYTDTLFTEQERGVS
IKSTPITVVMQDTKNKSYLVNVFDTPGHVNFSDEATAAMRLSDGVCIFVDAAEGVMLNTE
RLIKHALHEKLAITICINKIDRVILELKLPPTDAYYKLRNILDEINGIISMYSEEEDGLM
ISPLLGNVCFASSYYRFCFTLKSFGKIYADTYGGINEKXFAKTVWGDIYFNSKARKFTKK
PAHNTSQRSFVEFILEPLYKIFAQIVGDVDECLPRVCDELGIHLTKEEQKLNIKPLMRLI
GRRFFGDFTGFVDMCVEHLSSPVQNAKSKIEHIYTGPSDSELAEEMSHCDPDGPLMIHTT
KLFPTSDGTSFHVFGRVLSGTLYSNQEVRILGENYTLQDEEDSRFGQVGRLWIAEARYKV
EVNRVPAGNWVLIEGIDQPIVKTSTITDTSSNEEVYIFRPLKFNTSSVIKIAVEPVNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPV
VSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQITWPRKKLGEFFQ
TKYDWDLLAARSIWAFGPDAMGPNILVDDTLPSEVDKSVLGLVKDSIVQGFQWATREGPL
CDEPIRNVKFKILDAMIAGEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYNFVEVMAP
ADCVSAVYTVLAKRRGHA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatttgtatgatgagtttggcaactacattggccctgaactggacagtgat
gatgatgacgatgatgatgaagatgatcgtgatgatgaggaatacatggacagagatgat
gatgatgacggagatcatgatgacatggatgaccagccagagatgtccgtagtgctgcat
gaggacaaaaagtactaccccacagcggaggaggtgtatgggccggacgtggagactatt
gtacaagaagaggacacacaacctttaacagaacctatcattgctccggtgaagaagaaa
aagttttccatggctgagcaagatcttccagaaactacttacaatatggaatttctggct
gatttgatggactctccagaactgatacgaaatgtcacactttgtggacacctccatcat
ggcaagacatcgttcgtggactgcctcctggagcagactcaccccgacatccagggccgg
gcagacaaggatatgcgatacactgacactctattcacagaacaggagcgaggtgtaagc
atcaagtcgacgcccatcactgttgtgatgcaggacacaaagaacaagtcgtacctggtc
aacgtcttcgacacgccaggacatgtgaacttctcagatgaggctacagctgccatgagg
ctcagtgatggtgtctgcatttttgtcgatgctgcagaaggggtgatgttgaataccgag
cggcttatcaagcatgctctccatgaaaaacttgccatcaccatctgcatcaacaagatt
gaccgcgtcattctggagctaaaactgcccccaactgatgcctactacaagctacgcaac
atcctggatgagatcaatggtatcattagcatgtactcagaggaggaggatgggctgatg
atctcaccgctgctgggcaacgtctgctttgccagctcgtactaccgtttctgcttcaca
ctcaagtccttcggcaagatctatgccgacacatatggtggcatcaatgagaagnggttt
gcgaagactgtatggggagacatttatttcaacagtaaagcgaggaagtttacaaagaag
ccagcccacaacacgtcccagagaagctttgtggagttcatactggaacccctgtacaag
atatttgcccagattgtcggggacgttgatgagtgtctgccgcgagtgtgtgatgagctt
ggaatccacctcactaaagaagagcagaaactcaacatcaaacctctgatgaggctcatc
ggacgccggttcttcggggacttcacaggttttgtggacatgtgtgtggagcacctcagc
tcaccagtccagaatgcaaaaagtaaaatcgaacacatctacaccggcccatcagactcg
gagctggcggaggaaatgtcgcactgtgacccagatggcccactgatgatccacaccaca
aaactgttccccacgtcagatgggacgagcttccacgtgtttggtcgagtgttgagtgga
acactctactccaaccaggaagtgaggattcttggcgagaactacacgctgcaagacgag
gaggactcgcgtttcgggcaggtcggacgtctttggattgcagaagcaaggtataaggtg
gaggtgaaccgagtccctgcagggaactgggtgttgatagaaggcatcgaccagcccata
gttaagacctccaccatcacagacacttccagcaacgaggaggtgtatatattccgtcct
ctcaagttcaacacaagctctgtgatcaagatcgcagtggaaccagtgaatccgtctgaa
ctgcctaaaatgttggacgggctgagaaaggtcaacaagagttatcccctcctgaccacg
aaagttgaggagtcgggcgagcacatcatcctggggactggagagctgtacctggactgt
gtcatgcacgacctccgcaagatgtactccgagatagacatcaaggtggctgacccagtt
gtgtccttctgtgagacggtggtggaaacatcttcactcaagtgcttcgcagaaacaccc
aacaaaaagaataagttgacgatgattgctgagcccctggagaaggggttggcggaggac
atcgagaacgaggttgtgcagatcacgtggcccaggaagaaactgggagagttcttccag
acaaaatatgactgggatttgctggctgctcgatctatctgggccttcggacctgacgcc
atggggcccaacatcttggtggacgatactctgccatctgaggttgacaagtcagttctg
ggtttggtgaaggacagcatcgtgcagggattccagtgggcaaccagagaagggccacta
tgtgatgaaccaatccgtaacgtgaagttcaagatcctggatgccatgattgccggggag
ccgatacacagaggtggcggtcagatcatccccacagccaggagagtggcctactctgcc
ttcctcatggccaccccacgtatgatggagccctacaacttcgtggaggtgatggcgccg
gctgactgtgtgtctgcggtctacacagtgttagcaaagagaagaggtcacgcatga
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