KEGG   Helobdella robusta: HELRODRAFT_105890
Entry
HELRODRAFT_105890 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_105890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_105890
Spliceosome [BR:hro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    HELRODRAFT_105890
 Complex C
   U5 SnRNP specific factors
    HELRODRAFT_105890
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III EFL1 MMR_HSR1 Roc
Other DBs
NCBI-GeneID: 20194785
NCBI-ProteinID: XP_009015247
JGI: Helro1_105890
UniProt: T1EDY3
LinkDB
Position
Unknown
AA seq 977 aa
MDGDLYDEFGNYIGPDIESDSDSADELDDRDDDDAEDAHDDMDEGAVVGEEDDEESGMQV
VLHEDKKYYPTAEEVYGPDVETIVQEEDAQPLTEPIIAPIKRRKFAIAEVDVPETTYDLE
FLADIMDNANLIRNIALVGHLHHGKTSFVDCLVEQTHPAFVNREDKDMRYTDTLFTEQER
GLSIKSMPVTLVLPDIRNKSFLLNVFDTPGHVNFSDEVTASIRISDGIVLFVDAAEGVML
NTERLLKHAVQERLSITVCINKIDRLILELKLPPSDAYFKLRHIIDEINNLLSIYSEDQD
DLFISPLLGNVCFASSYYRFSFTLNSFANIYAEAFGGIDDQEFAKRLWGDIYFNSKTRKF
TKKPPNPSSSMRSFVEFILEPLYKIFAQVVGDVDTSLPRLCDELGIKLTKEESKLNIKPL
LKIVLGRFFGNFTGFVSMCVQHIKSPIDNARRKIEHIYTGPLDTELANHMFNCDPDGPLM
VHTTKLYPTYDATTFHALGRIMSGTLSSDQNVRILGENYSLEDEEDSRMGLVNRLWISEA
RYNIEVNRVPAGNWVLIEGIDQPIVKTSTITDVSGNEGAHIFRPFKFNTSSVIKIAVEPV
NPSELPKMLDGLRKVNKSYPLVTTKVEESGEHVILGTGELYLDCIMHDLRKMYSEIDIKV
ADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQIGWPRKRLG
EFFQNKYDWDLLASRSIWAFGPDTTGPNILVDDTLPSEVDKTLLASVKDSIVQGFQWGTR
EGPLCDEPIRNVRFKILDAQISTEPIQRAGGQVIPTARRVAYSAFLMATPRLMEPYFFVE
VQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFMPAIDSFGFETDLRTHTQGQA
FCLSVFHHWQIVPGDPLDKSIVIRPLEPQPATYLAREFMVKTRRRKGLSEDVSINKFFDD
PMLLELAKQDVVLSYAM
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggacggcgatctgtacgatgagttcggcaattatatcggccccgatattgaatcagat
tcggattcggcagatgaactagatgatcgtgacgatgacgacgctgaagacgctcacgat
gatatggatgaaggtgccgttgtaggcgaggaggatgatgaggagtcagggatgcaggtg
gttctgcatgaggataagaagtactaccccactgctgaagaagtgtatggacctgatgtc
gagacgatagtgcaagaagaggatgcacagccattaactgaaccaatcattgctcccatc
aagagacgaaagtttgcaattgcagaagtcgatgttcctgagacaacttatgatttagag
ttcttagcggacattatggataatgccaatctgataaggaacattgcattggtcggccat
ctgcaccatggcaagacctctttcgttgactgcttggtggagcagactcatccagcgttc
gtaaatagggaagataaagatatgagatacactgatacattattcactgagcaagagaga
ggtctgagtatcaaatcaatgccagtaacattggtcctacctgatatccggaacaaatca
tttctactcaatgtgtttgatactccaggtcatgtcaatttctcggatgaggtgacagcg
tccatcaggatatcagatggcatcgtcttgtttgtcgacgcagctgaaggagtgatgttg
aacactgaaagattattgaagcacgcggtccaggagaggttgtctataacagtttgcatc
aacaagattgacaggctgatcctggagttgaagctgcctcccagcgacgcctacttcaaa
ttgaggcacatcattgatgagattaataatcttttgagcatctactcagaagaccaagat
gacctcttcatatcacccctccttggaaatgtctgcttcgccagttcgtactacagattt
agtttcacactgaactcctttgctaatatctatgccgaggcgtttggtggtatagatgac
caggagtttgcaaagaggctatggggagatatttacttcaatagcaaaacacgtaaattc
acgaagaagccaccgaatccatccagtagcatgagaagttttgttgagtttatactggag
cccctctataaaatatttgcccaggtcgttggggacgtcgatacgagcctgccgaggctc
tgtgatgagttgggcatcaaactgacgaaggaagaaagcaaactgaacattaaaccactg
ctgaaaattgttttgggcaggttctttggaaattttacaggttttgtgagtatgtgtgtg
cagcatataaaatcccctatcgacaatgccagaaggaagatagaacacatatacaccgga
cccctcgatacagaacttgccaatcatatgttcaactgtgatccagatggacccttaatg
gtgcacactacgaaattgtaccccacgtatgatgccacgacctttcatgctctgggtcgt
attatgtctggtacgctgtcctccgaccaaaatgtcaggatccttggggagaattactct
cttgaggatgaggaagactctaggatgggattggttaatagactttggatttctgaagcc
agatacaacatagaggtgaacagggtgccggccgggaactgggtactcatcgagggtatc
gaccagccgatcgtcaaaacatccaccatcactgacgtcagtgggaacgagggggcgcac
attttcaggcccttcaaattcaacacctcatctgtcattaaaatcgctgtggaaccggtc
aacccatccgaacttcccaaaatgttggatggactgaggaaggttaataagagctaccct
ctcgtcactactaaggtggaggaatcgggtgagcacgtaatcctcggcacaggtgagttg
tacctggattgcatcatgcatgacctcaggaagatgtactcggaaattgacataaaagta
gcggacccggttgtgagcttctgtgagacggtcgttgaaacatcatccctcaaatgcttc
gctgaaacacccaataaaaagaacaagatcacgatgatagcagaacctctggagaagggc
ttagcagaggacattgagaacgaggtcgtacaaataggctggcctaggaagaggctggga
gagttcttccagaacaaatatgactgggacttgctggcctccaggtccatctgggccttc
ggaccggacacaactggacccaacatcctcgtcgatgataccctgccctccgaggtggac
aagacgttgttggcctctgtgaaggatagcatcgttcagggtttccagtggggtacgagg
gaagggcccctctgtgatgaaccgataaggaacgtgaggttcaagatcttggatgcacag
atctcgacggagcccatccagcgagccggggggcaggtcatcccaaccgccaggagagtg
gcctactcggcttttcttatggctacaccaaggctgatggagccatatttttttgtcgaa
gtccaagcaccagctgattgcgtgtcagctgtttatacagtacttgctaggaggagaggt
cacgtgactcaggacgctccggttccgggctcaccgctctacaccattaaggcgttcatg
ccggccatcgactcgttcgggttcgaaaccgaccttaggacacatacccaaggacaggcg
ttttgcctgtccgtctttcatcattggcagattgtgccaggtgatccactggacaagagc
atcgtaatcagaccactggaaccacaacctgccacctatctggccagggagttcatggtg
aaaaccaggaggagaaagggcttgagcgaggatgtgagcatcaacaaattctttgatgac
cctatgttactggaattggccaaacaagatgtcgtactctcttatgctatgtaa

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