Helobdella robusta: HELRODRAFT_166662
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Entry
HELRODRAFT_166662 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14314
nuclear pore complex protein Nup210
Organism
hro
Helobdella robusta
Pathway
hro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HELRODRAFT_166662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_166662
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HELRODRAFT_166662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_3rd
Ig_NUP210_7th
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_4th
Ig_NUP210_6th
Ig_NUP210_16th
Ig_NUP210_8th
ATP-synt_8
Motif
Other DBs
NCBI-GeneID:
20201569
NCBI-ProteinID:
XP_009010136
JGI:
Helro1_166662
UniProt:
T1EYB9
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MNLKILFSIFFLLTGVAVISDSQKLNVPKLLLPYNSLIGINFTLEATEGCLSWKSTRPDI
ATVQLIYDSDHHDNRNENNDCSRVAVVASVTKIPDRKTAIIIAQDIASGKELRCDVIVDK
IVSIKIQTTTKELYLDDSPEEFVLKAYNDKDDVFSSLEGMEFDWNLMPDNATSQVEQPAP
NKVLRILKYSESSYVAPSYIRSLEQDGRRGDVILIKGLHTGSAMVTVRAVDEHIEIEPVR
TLVVANLQLVPSVVYIMPHTSVQFTVELLKQGKAFKVTMPSSIYYLHTNDDDVIFLDVTT
STITGLTVGHTDVRLKGQNAQLAGVFREPSAGVYVVEPSYIEFSISPACNWVLETDKEYA
MHKVRIELNLPQEFQLLDSSVNGSYHYVKAKQKGVFSLYAKLAAIVKDGGVAIRYESVDG
SHDLEVINSIVVNVKQARGGKGKYVWKADDNLMIQIVATASGGNVGISEATAAESGSALV
QIQSDRVRMSYVRAIDAKHPTFKDDCLISVLPPKRIEINESHVEVVLNEEVTIPFALILS
DGTNDFPAYACEHLDFIISASNDNIFDHIEVHQLKSFSSSSKPSLLSTSPCAALRMKAKN
LGTTELFVTYTYNDVVIGSSFVLAVYQPLMLVSPDNFVTISPGTSSKVVVVGGPMPWLLD
DTKYFRKVTTRAVGGADGEEDDDEQSGSSISFSDIESISHSSGQMHTFTVFCHEEDEKFI
RLSVGNGPTAHNRRPAVSQLYVPVSCSEPKFLKISSQPYVEEMLEGCDLKAFKRAAIPVP
AGQEVHLKVNLYNRHSNKIENTTSVAIKWSLSDASLASFDIESAEDRGALSYGDNVLLHT
NGYNGDLAVSVTVEMYNHLYGNRKMDPILSDQINFHLLKYPTLSSSSPVLLNSPYIKGRV
IISHGSGQFDVSNNSATAALVTCNDDGDNRDGASKDSSGAASLREILITPLREGRCEIIV
TDRCLLPIKHIMLNLPLEDKDIKNDVTDKTVDVTYKLIIRVTDKDNITIPSEYFHLMAFQ
VFSTDERVLSVGNQLKLLDEHSAYLTVRTRSVGKTSIHIEATINGNLADNIKTGSSSRSS
SDKGSGSGKSAGSGDVYSYDVISNAVAVQQVILMKSFDTLQVTTSGGPQTDCLINYHLQP
ISEVSETNRKQSKQRKDGEHPVAVVDKQGLVTAVSVGEVKVVAECSRSWDAGAGDQLIYS
QASMSLSVVQMAGVKIFSPVQKVQVPLYAVGSHNRTIDPYSFSEECKFHWTISDHHVAQL
RPAFHKTNFSTKSSGNFAQRLMALRSGHVTVTLRVNKEDGTQMIDSITVKIVDRFQMLSP
SIQPAHVLLTPNTQLKLLSNFKLSSSYKPKDGTVHFSESEGVLESTSAIGSFPVIFEAHH
TNLGGGVDSSKISMASHDDDGDEDRYHANKMQTFVAKVKPISYIMITPVTHLHIYGNQSL
SSFPIGLEFDLIVTFHDEIGFKFDAVNVDWAIAMNKHSSLKILEDQQHHHQLMMKNGTLK
MMAMNSGFSVVKGQPASWSVPDDLLFINSQSGVAVAYQLGNSEVIFNFNSFVTSTKVKIT
PVLRYLIRLDGADSDLLSDAMSVKLVRVLLVGEKNDESCMEKVKVEQLNVTNFLYQCHAE
FSTIHPHDDADVKLGDILNVEPFFSYTTVHLTINPPILSTVLTASPGSHLQPQPEGAVLK
FVPAFHVLDADMYKVSYGIPDAYLRVLARKDVVDCIKVKSENDIVLQADKHPSSMDGDVV
SFRVTLPRPLPSYITDNLPKWVKVVLRCEDIGQEVGVNVKISLDGDEERDEDDLAAAPSS
LSPFSIWRRLRVGLRAYYEWVFYIFLCLFSFFCLFSTYMFFNPPPPSSASASLSSPSSPF
VSSPGAYYSRSPTTTSPQIPQSSPKMAPNIYNTPSYQGGSPRGQRLWTLNSSPLIGKLS
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaaatattgttttcaatttttttccttctaactggcgtcgctgttataagt
gattctcagaaattaaatgtccccaagttattattgccctataacagtttaatcggcata
aacttcactcttgaggctactgaagggtgcttaagttggaaatccaccagaccggatata
gccactgttcaactgatttatgattcagaccatcatgataacagaaatgaaaacaatgat
tgttccagagttgccgttgttgcttcagtcactaaaatcccagatcgtaagacagccatt
atcatagcccaagacattgcatcaggaaaagaattgagatgtgatgtcatagtcgacaag
atagtgtccataaaaatccagacaaccactaaggagttatatctggatgattcacctgag
gagtttgttctcaaggcctacaatgataaagatgatgtctttagtagtttggagggaatg
gagtttgattggaacctcatgccagataatgctactagccaggtagagcaacctgctcct
aataaggttcttagaatcttgaagtattcagaatcatcctacgttgctccgtcttacata
aggtctttggagcaagatggcaggagaggtgatgtgatattaatcaagggtcttcataca
ggaagtgccatggtcactgttagagctgttgatgaacacatagaaatagagccagtaagg
acgttagttgtggcaaacttacagttggtgcccagtgttgtctacatcatgcctcacacg
tctgttcaattcactgtcgagttgctcaaacaggggaaagctttcaaagtaacaatgccg
tcatctatctactacctgcacaccaatgatgatgacgtcattttcttggatgtgactaca
tctaccatcactggtctcaccgttggacacactgatgtcagacttaaaggacaaaatgct
cagctggctggtgtcttcagagagccaagtgccggagtttatgttgttgagccatcatac
attgaattttccatatctcctgcttgcaattgggtcttggagacagacaaggaatatgca
atgcataaagtgagaatagagttaaacctccctcaagaattccaattgttggactcatca
gttaatggatcgtaccattacgttaaggctaagcaaaaaggggtgttcagcctgtatgct
aagctggctgctattgtcaaggatggtggcgttgcaatcagatatgaatcagtggacggc
agccatgatctggaggtcatcaattccattgtggtgaatgtcaaacaggcaagaggtgga
aaagggaaatacgtctggaaggcagatgacaacttgatgatacaaattgtagcgacagca
agcggtggtaacgttgggatttctgaggctactgctgctgagagtggcagcgctcttgtt
caaattcaaagtgaccgggtaaggatgagctatgttagagccattgatgctaaacatcca
acattcaaagatgattgccttatatctgtcttgccgccaaaacggattgaaataaatgag
agtcatgttgaggtggtgttgaatgaagaagtcaccataccatttgctcttattctgtct
gatggcactaatgactttccagcttatgcatgtgaacatttggacttcatcatctccgcg
tcaaatgataacatatttgatcatatagaagttcaccagctgaaatcattttcatcatca
tcaaagccatcattgttatcaacatccccttgtgctgctttgaggatgaaagctaaaaat
ttgggaaccacagagctgtttgtaacgtacacatacaatgatgttgtcattggtagtagt
tttgtcttggctgtctatcaaccattgatgttggtaagtccggacaattttgtaacaata
agtcctggaacgtccagcaaggtggtggttgtgggtgggccaatgccatggctcttagac
gataccaaatattttaggaaggttaccacgagagctgtcggcggagctgatggagaagaa
gatgatgatgaacagagtggctcgtctatttcattttctgatattgaatcaatatcacat
tctagcgggcagatgcacacgttcactgttttctgccacgaggaagatgagaagttcatt
agattatcagttggcaatggaccaacggctcataaccgtaggccagctgtctcacagctt
tacgtaccggtttcttgttccgagccaaagtttttgaaaatttcatctcagccatatgtc
gaggagatgctggagggatgtgatttgaaggctttcaaacgggctgctattccagtacca
gccggtcaagaagtgcatttaaaagtaaacttatacaacagacattcaaataaaattgaa
aacacgacatctgttgctattaaatggagtttatctgatgccagtttggcttcatttgac
attgagtctgcagaggatcgtggtgctctctcttatggagacaatgtactgttgcacaca
aatggttacaatggtgatctggcggtttctgtcactgtggagatgtacaatcatctctat
ggcaacaggaagatggatccgatccttagtgaccagataaacttccatctgttgaaatat
ccaactttatcatcgtcatcgccggttcttttgaacagtccatacattaagggcagagtg
attatttcccatggttccggacagtttgacgtttccaacaactcggcaactgccgccctg
gtgacttgcaatgatgatggtgataatagagatggcgctagtaaggatagtagtggggct
gctagtttaagagaaatattgatcactccactaagagagggtagatgtgagataatagta
acagacaggtgtttactacccattaagcacatcatgctgaacctgccacttgaggacaaa
gacatcaaaaatgacgtcaccgacaaaactgtcgacgtcacgtacaagttaatcatcaga
gtaactgataaagacaacatcaccatacccagtgaatattttcacctcatggcctttcaa
gtattctctactgatgaacgtgttctctccgttggaaaccagctgaaattattggacgag
cactcggcttacttaactgttcgcacgagatctgtgggcaagacatccatccacattgaa
gcaaccatcaacgggaatctcgccgacaacattaaaactggtagcagtagtagaagtagt
agcgataagggtagtggtagcggcaaaagtgctggtagtggtgatgtttatagttatgac
gtcatcagtaatgctgttgccgttcagcaagttattttgatgaaaagttttgataccctg
caggtgacaacatctggaggtccacagaccgactgcttgatcaactaccacctacagccc
atctccgaagtcagtgagacgaatcggaagcagagtaagcagaggaaggatggtgagcat
ccagtagcagtcgtcgataagcaaggattagtgacagcagttagtgtcggggaggttaaa
gttgtggcagaatgttctaggagttgggacgctggagctggtgatcaattgatatattca
caagccagcatgtccctgagtgttgttcagatggctggcgtcaagatattttcacctgtg
cagaaagttcaagttccattgtatgccgttggctcgcacaacagaactatcgatccatat
tcattctcggaagaatgcaaattccactggacgatcagtgatcatcatgtcgcccaatta
agacctgcctttcataagacaaatttttcaacaaaaagtagcggaaacttcgcccagagg
ttgatggctttgaggtcaggtcatgtgacagtgaccttgagggtaaacaaggaagatggc
acacagatgattgacagtattaccgttaaaattgtagatagattccagatgctctcgccc
agcatccaaccagctcacgtcctcctcaccccaaacacacaacttaaactactatccaat
tttaaactcagcagcagttacaagccgaaagatggaacagttcactttagtgaaagtgaa
ggggtgctcgagtcgacatctgctatcggtagttttcctgtgatttttgaagctcaccat
acaaatctaggtggtggtgttgatagtagtaaaattagtatggctagtcatgatgatgat
ggtgatgaagatcgttatcatgccaacaagatgcagacttttgttgctaaggtaaaacca
atatcatacataatgataacgcccgtgacccacttgcatatttatggcaatcaatctctg
tcaagttttcctattggtttggaatttgacctaattgtgacatttcacgatgagattggc
ttcaaatttgatgcagtgaatgttgattgggcaattgctatgaataaacactccagtttg
aagatattagaagaccagcagcatcatcaccaactgatgatgaagaacggcacactgaag
atgatggcgatgaatagcggattttccgttgtgaagggtcaaccagcttcctggtcagtg
ccagatgacctactttttatcaacagccaatcaggggtggctgtggcttatcagttggga
aattcagaagtcatctttaatttcaattcatttgtgacgtcaacgaaggtgaaaatcaca
cctgtattgaggtacctgataagattggatggtgctgatagtgacctcctttcagatgcc
atgtctgtcaagttggttcgagtgctgctcgttggagaaaaaaatgacgaaagctgcatg
gaaaaggtcaaagttgagcagttgaacgtgactaactttctttaccagtgccatgcagag
ttttccaccatacatcctcatgacgatgctgatgtcaaacttggagacatacttaatgtc
gaaccttttttcagttatacaactgtccatctaaccatcaatccacctattttatcgact
gttctcactgcatcacctggatcgcaccttcagccccagcctgaaggagctgtattaaaa
tttgtacctgctttccatgtgcttgatgcagatatgtacaaggtgtcttatggcattcct
gatgcttaccttagggtactagccaggaaagatgtcgttgattgtataaaggtaaaatca
gagaatgacattgtgctacaagctgacaaacatccatcgtccatggacggcgacgtcgtc
tcatttcgcgtaacgctgccgagacccttgccaagttatatcaccgataaccttcctaaa
tgggtcaaggtcgtattgaggtgtgaggatataggtcaggaagtgggtgtaaatgttaag
atatctctggacggtgatgaggaaagagatgaggatgatttggcagctgcgccatcatca
ctatcgccattttcaatatggcgacgactgagggtcggtctgcgtgcgtattacgaatgg
gtgttctacatcttcctctgcctcttctccttcttctgtctcttctcgacttacatgttc
ttcaatccacccccgccatcaagtgcttccgcatcgttatcttcgccatcatcaccgttt
gtatcatcacctggggcttattattctcgttcgcccacaaccacctccccacaaattcca
caatcatcgccaaaaatggctccaaatatatacaacaccccttcgtatcaaggaggaagt
cccagaggtcaaaggttatggaccttgaactcctcgcctttgatcggtaaactatcctga
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integrated database retrieval system
