Helobdella robusta: HELRODRAFT_182783
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Entry
HELRODRAFT_182783 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K13138
integrator complex subunit 1
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hro03041
]
HELRODRAFT_182783
Spliceosome [BR:
hro03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
HELRODRAFT_182783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
20208702
NCBI-ProteinID:
XP_009031759
JGI:
Helro1_182783
UniProt:
T1FIQ3
LinkDB
All DBs
Position
Unknown
AA seq
2529 aa
AA seq
DB search
MASKRQGKGSKMKQDSDLKLSMGGLKKTGSTSGPSSSGIGGSSSSSGGNAGASSSSHSLN
IHKREREMAPSWSSNIKRQKLGPVMSLSGQQSLTTLGRPADTSEYRSSPVQMYLYEDIAI
DVEGQNLVALVNEAFVDYERMEGLLCGAVKHLKANKLKPDPSIYLAVMYLARVKPTLFQG
EMITEAFCSLLKRDPGLSLKVKSNNLVAVLACNVFMSVMQDEDSWPEHFVKATAAATSTT
STSSSSSLAMTSSSNDNKMDDSSSQQSQDVISYPVKQSMEQYALDVIRDQLNRRQPLDGG
SKNLVLTLTYLCGIPDVRVLAGQRLDMWLQSPKLMKVAQDLLMSVCINCDPVNCASDLEL
VNTLVRIRFKTKALSQHFNLCIKELLESNPDNLATLLQQTISNELSSARSPNNMSLILVM
LQLHPEQTSKLLAETFLDCMMLRDDHTKALRSLVREVVKVSKSSEFNISSFVFNLLQDRN
TGKFRDLDPIVKERYMISLIDIVSMCMLLCITPAVREAASAAARLDIKDIEVLRCFQKQI
MFMQRDAVWWLHSIVIKMMNVKPNDYIQGLKKVLFVEKPEVYSKIDNWPPDNDRNLMIKL
VSEVPILEDALFRIILMGLNTKSLHLSILELIDLIELLVKRAASLYSEDFPVLKIDNLTF
IDALLNLCAYRHPDFTALPAGYKAPSLAISSFYWKAWIILLIISAYNPATVGLKGWSSYP
TLKCLMEMVMTNTFTFPPMSMVDEETTADDIIMQEKQMAEFTRQQTLEYECHLAGSVMNE
SNSRLLPQVTRMEPELVLGGGGLGASQSMPWLKELVESNDSSLEVLPVQCLCEFLIHHLN
DAAEDAASAAAADEDDDQMRGRNEQKLKKQEQLLSRLQNLVWTTSDDPRVIDLIRQSLVY
FFQRLSSNLSCTRAQSSKCLFLILGKRMPHSEDDDSMELEFAENNNNNKNNSNNNNNNSN
GNNDLAAYDWLLSSLPQIFHFGAIKNQACQVETSVPAVSAYIMYLSKFCANMELHELDSL
VLDMAQLIVERPSIVAFLLPQDFHLSSSNNITDDELNDVVTKGRSLSSSSSSSSLRADHL
VEASLIHLFCCYLSKAQQPQNEAYSWSNTQDQILLHWSSGQSAKMNVLVVQAMIMLLTLG
PPNCESRYMELLEAWFPLTGSTPTAYLVDTSEEALLVPDWLKLRMIRSNITRLVDNSLAD
LDCSQLILFIQSFGIPLSSMDKLLQLLDVMQEGREEDEAERDALDRGYITQLVEVQHMRG
ASGGERFYRLISGNNINVISDVSKAKSDDDVIVNDIKNVVSGSNNNVKNNSSNNINYNAP
TSKTPKEALLKCQQEDMTSVNEIKRLLNEIFVDEKLPKIKKYDSFRSLQKILNTKNGPKI
FISVLSEASSSAATSSSSSFNTSLIKSLYNQFNHSCLVFRLVIPHIDLSQDDNRQVLNQL
CLRAPAKTHPLASLISSYIKEHTSSSLQSSSLSSQSSSLPPSSSSSSSSCQLQASLPPAP
PSPHVVAISSSSSLCQIKVTSSSSSSSTPPLIAISSSSSLVANNEMSMDISDDSQNGSRG
DGEGDKDDDDGDDFSDFSEEKIRKLLEKALDDPNNMERMVMRVVNAFLQQKVLPPYASQV
IFDLIGQFKNRRYANIRLGLLLDCIEPVSPGIVQRQSIKQLVKVAFAKHQQQQQPKTLNQ
QKTDDDDDDMRTDNDGGRDRRDGHVPGQDDDDDVTRIYSVGSCTSLFSSPPPSSSSLHHH
YLLSLILHRSGFKNIRLVIDMLLTSSSTSSTADDSDDFIKSLNAGLMLDFLHASIQLPAI
WQGRDRIISKYQPVEDILSLSTNQIEALTSLVVRDLTDSSLSQSPRAGYGFMKSDWMKRL
LSKRVNLIESSCGGQMNKLLAVVKKLFAILNTKDSKYREGVVGGSNDDPEIMVAKLLLWE
MYLRCPKVFASRQQHFNNYDNNNNSTNNINNNNNGYINNDTTGNINNINDINKKDNDIDF
GFDGLNVDDHELLETIVLHDYSYVLSHRMLMSLMDSTSGRQGEEQMLNANVACRKLASKH
PLIFLRQLPLMSSLLQGRAQYSYTEMKNRNYFLLFTHSLNILDMLQPQLFHLQHRRFLIH
GLTHKQLGGLIKKFLELVDSFLNYQSTQHSDNDDDDDDDVKDDDDNENGGNDKNGAKKKN
DVNDNDVTKKKSTDGDDVDGKPAGGDDDDGGTEMKKGDDDDDRRDDDAFSVVQHYTPLLK
QLSEQYVDLSIISSILTKLVLHQHRREQKQFSFFAPTTTTTSVSADDDDDDDDGSDDNSA
DKSNDKTTKPIFKAATSSHNKNFNKPPSKLGQPSKLGQPSKLGQPSKPVQPPKSCQSSKL
ERPSKLGHSSKLGHSSKLGQVMTYKSQLAPLTSHAIPHNQLNVLKQKLTRSLNGSHRGDL
VDGLMELDELSKIKVEVLEHFIDNINELLMDGNARYREYAHLLMMRIVRFNPRLSGRFRR
QMGKCLESANFSVMVSALNNLKEFVVLNQAHAAELLRSAFVAGISLQVDTTAYIAQSLQL
LNLDMNAGV
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagcggcaaggcaaaggttccaagatgaaacaagactccgatcttaaatta
tcaatgggtggcttgaaaaaaactggatccacatcggggccaagtagtagtgggataggt
ggcagcagtagtagtagtggtggcaatgcgggtgcaagcagcagctctcattccttaaac
atccacaaaagagaacgagaaatggcaccttcatggagttcaaacatcaaaaggcagaag
ttagggccagtgatgagcttgtctggtcagcaatcattgaccacactcggtaggccagct
gatacctcggaatatcgatcgtctcctgtccagatgtatctctatgaggatatcgctata
gatgttgaaggtcagaacttagtggctctggtaaacgaagcgtttgtggactacgagagg
atggagggactgttgtgtggggcggtgaaacacttgaaggccaacaagttgaagcccgac
ccgtccatctacctggccgtcatgtacctcgccagggtcaaacccaccctatttcaaggc
gagatgattacagaggccttttgcagcttgctgaaaagagatccaggtttgagtttaaaa
gtaaagagtaataacttagtggctgttcttgcttgcaatgttttcatgtctgttatgcaa
gatgaagactcttggcccgagcattttgttaaagcaacagcagcggctacatcaacgaca
tcgacgtcatcctcatcgtcgttggcgatgacgtcatcatctaatgacaacaagatggat
gattcaagcagtcaacaatctcaagatgtcatttcctaccccgtcaaacaaagcatggag
cagtatgccctcgacgtcatcagggaccagctaaacagacgccagccactggacggtggc
tccaagaatctcgtcctcaccctcacctacctttgtggcattcctgatgtcagggtgcta
gctggtcagaggcttgatatgtggctacagagtcctaagttgatgaaagtggcacaggac
ctcttgatgtccgtctgcatcaattgtgaccccgtgaactgcgccagtgaccttgaactt
gtcaacaccttggtcagaatcaggttcaagactaaagccctctcacagcacttcaatctt
tgcatcaaagagctactggaaagcaatccagataacctggcaactctcctacagcaaacg
atcagcaacgagctgtcaagcgccaggagtcccaacaacatgtccctcattcttgtcatg
ctccaactccatcctgaacaaacttccaagctactggccgagacgtttctggactgcatg
atgcttcgagatgaccacacgaaggcgctgaggtcactcgtgagagaggtcgttaaggtc
tccaagtcgtcagagttcaacatcagcagtttcgttttcaacctcttgcaggatcgcaac
acgggcaagtttcgcgatcttgatccaattgttaaggagcgttacatgatatcactgatt
gatatcgtctccatgtgcatgctactctgcatcacaccagccgtcagggaagcggcttct
gctgctgccaggctcgatatcaaagacattgaggtcttgagatgcttccagaagcagata
atgttcatgcagcgagatgcagtctggtggctgcactccatcgtcatcaagatgatgaat
gtcaaaccgaacgattatatccagggtttgaagaaagtgctgtttgttgagaaaccagag
gtctattcgaaaattgataactggcctcctgataatgataggaacctaatgataaagtta
gtatctgaagtgcccatactggaagatgccttgttccggatcatcttgatgggattaaac
accaaaagtctccaccttagtattttggagctcattgatctgatcgaactgctggttaag
agagctgcctctttgtattctgaagactttccagtgttgaaaattgacaacttgacattc
attgatgccctcctcaacctctgtgcctacagacacccggatttcactgctctgccggct
ggttataaggctccttctttggccataagttcgttctattggaaggcttggattattctg
ctcattatatctgcatacaaccctgctacagtcgggctgaagggctggagttcctaccca
acactcaaatgcttgatggaaatggtgatgaccaacaccttcacctttccaccaatgtcg
atggttgatgaggagactacggctgatgacatcatcatgcaggagaaacagatggcagag
tttacaaggcagcagacgctggagtacgagtgccatttggcgggctctgtgatgaacgag
agtaacagtcgactactgccacaagttactcgcatggaacccgagttagttcttggtggt
ggtggtttgggggcctctcaatctatgccctggttgaaggagctcgtggaatctaatgat
agctcacttgaggtcttgcctgttcagtgtctctgcgagttcctcatccatcacctcaat
gacgctgctgaagacgctgcttctgctgctgctgctgatgaggatgatgatcagatgagg
gggaggaatgagcagaaactgaagaagcaggagcagctgttgtctcgactgcagaacctc
gtctggacgacgtcagacgatccccgggtcatcgacctcatcagacagtcacttgtctat
ttttttcagcgtctcagttcaaatctttcttgtacgagggctcaatcttctaagtgttta
tttttgatacttgggaagcgaatgcctcactcggaggatgacgactccatggagctggag
tttgctgaaaataacaacaataataaaaataatagcaataataataataataatagtaat
ggtaataatgacttggcggcatatgattggctgctcagtagcctgccacaaattttccat
ttcggtgccatcaagaatcaagcttgtcaggtagagacgagcgtgccagcagtcagtgcc
tacatcatgtacctgagcaagttttgtgctaatatggagcttcatgaactcgatagcttg
gtcttggacatggcacagctgatcgtggaacgaccttccattgtggccttcctattacca
caagacttccacctcagcagcagcaacaacatcactgacgatgagttgaatgacgttgtg
acgaagggaagatcgctatcgtcgtcgtcgtcgtcgtcgtcgctgagggcggatcacttg
gtcgaggcttctttgattcatctcttctgctgctacctcagcaaggcgcaacagccacag
aatgaagcttattcctggtcgaacacacaggaccagatattgttgcattggtcatctggt
cagtcagccaagatgaacgtgttggtggtgcaggctatgatcatgctgcttaccttgggc
ccacctaactgtgagagtaggtatatggaacttctggaggcctggtttcctctgaccggt
tcaactccgactgcttacctggttgacacatccgaggaagccctgctcgttcctgattgg
ctgaagttgaggatgatccggtcaaacatcaccagacttgtcgataattccctggctgat
ttagactgctcccaactcatcctattcatccaatcgttcggcattcctctctcgagtatg
gacaagttgctgcagctgcttgacgtcatgcaggagggcagggaggaggacgaggcggag
agggacgccctggacaggggttacatcactcagctggtcgaggtccaacacatgaggggg
gcttccggaggggagcgattctataggctgatcagtggaaacaacatcaacgtcatcagt
gacgtcagcaaggctaaaagtgatgatgacgtcatcgtcaacgacattaagaacgtcgtc
agtggtagcaacaacaacgttaaaaacaacagcagcaacaacattaactacaatgctccc
accagtaagacaccaaaagaagctctgctaaagtgccaacaagaggatatgaccagcgta
aatgaaatcaaacgactgctaaatgagatttttgtcgatgagaagttaccaaagatcaag
aaatatgattcattcagatccttgcaaaaaattctaaacacaaagaatggcccaaagata
tttatatccgttttatcagaagcatcatcatcagcagcaacatcatcgtcatcatcattt
aacacgtcgctaatcaaatcactgtacaatcaatttaatcactcttgtctagtatttcga
cttgtcataccacatatcgacttgtctcaagatgacaataggcaagtcttaaaccagctc
tgccttcgtgcacccgctaaaactcacccactggccagccttatatcatcatacatcaaa
gaacatacatcatcatcattacaatcatcatcattgtcatcgcaatcatcatcactacct
ccttcgtcgtcgtcgtcatcgtcgtcgtgtcagctgcaggcgtcgctaccaccagcgcca
ccatcgccacatgtggtagcgatatcgtcgtcgtcatcattgtgtcagataaaagtgacg
tcatcgtcgtcgtcgtcctcaacgccgccactcatagcgatttcgtcgtcgtcgtcgctg
gtggccaataatgagatgtctatggatattagtgacgacagccaaaatggtagtcgtggt
gatggtgagggggacaaggatgacgatgatggtgatgatttttcggattttagcgaagaa
aaaatacggaaactattagaaaaagctctagacgatccgaataacatggaaaggatggtg
atgagagtcgtcaacgcattcctccaacaaaaagtccttcctccatatgcctctcaagtt
atcttcgatctcattggccagtttaaaaataggagatacgcaaacataagactcggcttg
ctacttgattgcattgagccagtcagtccagggattgttcagcgacaatcaatcaaacaa
ctcgtcaaggtggcctttgcaaaacaccaacaacaacaacaaccaaaaacactaaatcaa
caaaaaaccgacgatgatgatgatgatatgcgtactgataatgatggtggtcgtgatcgt
cgggatggtcacgtgcccggtcaggatgacgacgatgacgtcactagaatatattcagtt
ggcagttgcacatccctattttcgtcaccaccgccgtcgtcgtcctcgttgcatcaccat
tatttgctgtctctgattctgcataggagcggctttaagaatattcgactcgttatcgac
atgctgctgacgtcatcatctacgtcatcaacagccgatgattcggatgatttcatcaag
agtctaaatgcaggtctcatgttggacttcctccatgcctccattcaactaccagctatc
tggcaaggcagggataggataatctccaagtatcagccagttgaagatatcctatcattg
agcaccaatcaaatcgaggctctcacgtcattggtcgttagagatttaaccgactcatct
ctcagccaatcaccacgggccggttatggttttatgaaaagcgattggatgaaacgtttg
ctgagtaagagggtaaacttaattgagagttcctgtggcgggcagatgaataagctgctg
gctgtcgttaagaaattgttcgccatcttgaataccaaagattctaaatatcgggaaggc
gtcgtcggaggttccaatgacgatcctgaaataatggtggcgaagttattgctgtgggag
atgtacctgaggtgtccgaaggtcttcgcaagccgccaacaacatttcaacaactacgac
aacaacaacaactccacaaacaacatcaacaacaacaacaacggatacatcaacaacgac
accacaggcaacatcaacaacattaatgacatcaacaaaaaagacaacgacattgacttt
ggtttcgatggtctaaatgttgatgatcatgaactacttgagacaattgtactccatgat
tatagctatgtactcagccacaggatgctgatgagtttgatggacagtacttccggcaga
cagggggaagagcagatgcttaacgcgaacgtggcctgccggaagttggcttctaagcat
cctctcatctttctcaggcaacttccgctgatgtcgtcactgctccaggggcgcgcccaa
tactcctacacggaaatgaagaacaggaactacttcctcttgttcactcactcactcaac
atcctcgacatgctacaaccacagttgttccacttgcagcatcggagatttttaattcac
ggcttgacccacaaacaactcggtggcctcattaagaagtttctagaactggttgacagt
ttcctaaactatcagtcaacccaacattcagataatgatgacgacgacgatgatgatgtt
aaagatgatgatgacaatgaaaatggtggtaatgataaaaatggcgctaagaaaaaaaat
gatgtcaatgataatgacgtcacgaagaaaaagagcactgatggtgatgatgtcgatggc
aagcctgctggtggtgatgatgacgatggtggtacagagatgaagaaaggtgatgatgat
gatgatcgtagagatgatgatgcgttttctgttgtacagcattacactcccctattgaaa
caactaagcgaacagtatgtggacctctccatcatcagctccatcctcaccaaacttgtc
ctccaccaacacaggcgagagcaaaaacaattcagctttttcgcgccaacaacaacaacc
acatccgtttccgctgatgatgatgatgatgatgatgatggtagtgacgataatagtgca
gataagagcaacgacaaaacaacaaaaccaattttcaaagcagcgacatccagccacaac
aaaaactttaataagccaccatctaaattaggtcaaccatcgaaactaggtcaaccatct
aaattaggtcaaccatctaaacctgttcaaccacctaaatcttgccaatcatcgaaatta
gaacggccgtcgaaattaggtcactcatcgaaattaggtcactcatcgaaattaggtcag
gtgatgacctacaaatctcagttggcgccactgacgtcacacgcgatacctcacaaccag
ctgaatgtgctgaagcagaagctaacgaggagcttgaatggtagccaccgtggcgacctg
gttgacgggctgatggagttggatgagttgtctaagatcaaagtggaagttctagaacat
tttatcgacaacataaacgagctgctgatggatgggaatgcgaggtacagggagtatgcc
caccttctcatgatgaggatcgtcaggttcaatcccagattgagtgggaggtttaggagg
cagatggggaagtgcctggagagcgccaacttcagcgtcatggtcagtgctctcaacaat
ctcaaggaattcgttgtcctcaatcaagcacatgccgcggagcttctgagaagcgctttt
gtggctgggatatcgctgcaagtggacacgaccgcatacatcgctcagtccctgcagcta
ctcaatctggacatgaacgccggagtgtga
DBGET
integrated database retrieval system
