KEGG   Helobdella robusta: HELRODRAFT_187181
Entry
HELRODRAFT_187181 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
hro  Helobdella robusta
Pathway
hro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HELRODRAFT_187181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_187181
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_187181
   03032 DNA replication proteins [BR:hro03032]
    HELRODRAFT_187181
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     HELRODRAFT_187181
Spliceosome [BR:hro03041]
 Complex A
  U1 snRNP components
   Sm proteins
    HELRODRAFT_187181
  U2 snRNP components
    HELRODRAFT_187181
 Complex B
  U1 snRNP components
    HELRODRAFT_187181
  U4/U6.U5 tri-snRNP components
    HELRODRAFT_187181
 Complex C
  U2 snRNP components
    HELRODRAFT_187181
DNA replication proteins [BR:hro03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     HELRODRAFT_187181
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20210622
NCBI-ProteinID: XP_009020935
JGI: Helro1_187181
UniProt: T1FP75
LinkDB
Position
Unknown
AA seq 174 aa
MAGRSSKMLQHINYRMRCTLQDGRIFIGTFKAFDKHMNVILGDCDEFRKIKSKNKAAEKE
EKRTLGLVLLRGETLVTMTVEGPPPPEQEGLARVPVPGSAGGPGVGRAAGRGMPILSAGP
TPGLAGPARGIGMPPSQMMQPQARAGMPPAPMPAGVRGPPPPGMMRGGPPPRPY
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggggagaagttcaaaaatgcttcagcacataaactacaggatgagatgcacacta
caagacggaagaatttttatcggtacattcaaggcctttgacaaacacatgaatgtcatc
ctaggagattgtgatgagttcagaaaaatcaagtcaaaaaacaaggcagccgagaaagag
gagaagaggacgttgggtttggttctactgagaggcgagactttagttacgatgactgtc
gaaggccctccacctcctgagcaagagggtctggctcgtgtgcctgttcccggaagtgca
ggggggcccggggtaggtcgggctgccggaagaggtatgcctatcttgtctgctggtccc
acacctggtttggcaggtcctgctagaggcattggcatgcccccgtcacaaatgatgcaa
cctcaagcgagagctggaatgccccctgctcctatgcctgctggtgttagaggaccgcca
ccacctggaatgatgagaggagggccacctccaagaccttactag

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