Helobdella robusta: HELRODRAFT_190612
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Entry
HELRODRAFT_190612 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_190612
Enzymes [BR:
hro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HELRODRAFT_190612
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
HELRODRAFT_190612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Ribosomal_S14
Prot_inhib_II
Motif
Other DBs
NCBI-GeneID:
20211645
NCBI-ProteinID:
XP_009012824
JGI:
Helro1_190612
UniProt:
T1FS48
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDYYATLFSSKRPPDRNSDHILSIVLGFDCEWCNNGDEVRPISLIQLSTSSGLCLLIRIK
ILLDKENVFPQSLADILRDKRILKVGVASIEDGQKLHRDYNIECKGCLDLRYVVLRCRLA
KISPGGLKYLSKAVLGIDLSKNIRIRCGNWESDELNDEQIFYAAMDSLVSIKIFQKLVDL
QYSHNKEIANITNNLILKNTASSNNYTKICQGIVDIKYKNKAENKFKIFQNCHITNSRRD
DPPNFKEAKPTRAYNVRKEPLYQNCKLFSNDGQLLCTCDEKKALWYIDKKIGEKISDNPL
TVKLLFEPAGRPTSESDYYLQEKDNRCVVCGLPESYIRKNIIPHEYRKHFPVIFKEHKSH
DVVLLCSKCHLISNQYDSRVKFSLARKYDATIRSDKYVSSAATTKVKSAAKALYNDRGHD
KIPTQRQQELRNCLKEYFKVDEFYDELVDRGFSLDVEKQINENFEEHGLKVTRSVIAENG
LIKFERMWRQHFLDSMKPAYMPNLWSVNHGHDRLLRILPQQQFLENYKNVN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggattattacgcaactctctttagcagcaagcgaccgcctgatcggaactctgaccat
atcttatccatagttttaggatttgattgtgaatggtgtaacaatggagatgaagttagg
ccgatatcgttaattcaactttcaacatcttcaggcctctgcctgcttattaggattaag
atccttcttgacaaggaaaatgtttttccacaaagtttagctgatattttgagagataaa
agaatattaaaagtcggagtggccagtattgaggatggacagaaactgcatagagattac
aacatagaatgcaaaggctgcctagatctgagatatgttgttctcagatgtcgtttggca
aagattagtccaggtggcctaaagtacctttcaaaagcagtgttgggcatagatctatct
aagaacattagaattaggtgtgggaattgggagagtgatgaattgaatgatgagcagata
ttctatgcagccatggacagtttggtgtcaataaaaatatttcaaaaacttgtcgacttg
caatattctcacaataaagagatagctaacattaccaacaacctaatcttaaaaaacacc
gcatcgtccaacaattatacaaagatatgtcagggaatagttgacatcaaatataaaaac
aaagcagagaacaaatttaaaatttttcaaaactgtcacatcactaattccagacgggat
gatcctcctaattttaaggaagcaaaaccgactagggcgtacaatgtacgcaaagaacct
ttatatcagaactgtaaattattttcaaatgacggtcagctactatgtacttgcgatgag
aaaaaagctttgtggtacatagataagaagattggagaaaaaatatccgacaatccattg
acagtgaagttgttgtttgagccagccggtcggccgaccagtgaatcggattattattta
caggaaaaggacaacagatgcgtcgtgtgtggtctgcctgaatcttacattaggaaaaat
attattccacatgagtacaggaaacactttccagtcatatttaaagagcacaagtcacat
gacgtcgtcctactatgtagtaaatgtcacttgataagcaaccaatacgattcccgtgtt
aaattttcactggctagaaagtatgatgccactattaggtcagataagtatgtcagttca
gcagctactacaaaagttaagtcagctgcaaaagccctgtataatgaccgtgggcacgac
aagataccgacacaacgtcagcaagagttgaggaattgcttaaaagaatattttaaagtt
gacgagttttatgatgaactggttgataggggtttttcgttagatgttgagaaacaaatt
aatgaaaactttgaagagcatggtttgaaagtgacaagatctgtcatagcggaaaatgga
ttgattaaatttgagagaatgtggaggcaacattttttggactccatgaaacctgcctac
atgcctaatttgtggtctgttaatcatggacacgatagacttctacggatattaccgcaa
cagcagttccttgaaaattataaaaatgtgaattaa
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