Helobdella robusta: HELRODRAFT_62703
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Entry
HELRODRAFT_62703 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10260
F-box and WD-40 domain protein 7
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HELRODRAFT_62703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hro04131
]
HELRODRAFT_62703
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_62703
Membrane trafficking [BR:
hro04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
HELRODRAFT_62703
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
HELRODRAFT_62703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_SCAP
EIF3I
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
F-box-like
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_NOL10_N
F-box
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Nup120_160
WD40_like
UCP007778
Motif
Other DBs
NCBI-GeneID:
20213387
NCBI-ProteinID:
XP_009009186
JGI:
Helro1_62703
UniProt:
T1FX39
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
WFKEFNDEQKNLVLKNFINECEQSQFHLLSMVMSHRMHQGCPANCQDPLTVLPEIVSSKI
LSYLDAGSLCKSSLVNKKWHQLTNGQHLWRKLCRDSRWNFQWDDVNFSKECKSSAFDWKK
LYIEKYRLQLNWLKGRCNVRTFEGHSQGVSCLQFDDTRIVSGSSDNTIKVWNIRTNSSWA
VQTLVGHSGKVRCLHLDHSRLVSGSADLTIKVVWDLSLKKNWASIACKVTMIGHTDTVRC
LKADDTKVISGSYDKTIKIWNIKNGACENTLRGHEGAVLCIYFDQDRIISGSSDSTIKVW
STSTMTCIQSLTGHLDAVSCLQFVNNKIVSGSLDCTLRYWDLRSASCVKVIDWMASEGHT
RVIRLCLQVDKSRVVSASDDKTIKVWSLETGKRLVTLKNHTDGVTCLQFNEDMIVSGSYD
KTVKLLDFSCC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
tggttcaaagaattcaatgatgaacagaaaaatcttgttctgaaaaatttcattaatgaa
tgtgagcaatcccagtttcacctcctgtcaatggtcatgtctcacaggatgcaccagggc
tgtcctgctaactgtcaggatccactgactgtccttcctgagattgtttcatcaaaaatt
ttatcttatcttgacgcaggcagtttgtgcaagtcatcattggtcaataagaaatggcac
cagctgaccaatggacaacacttgtggagaaagttatgcagggattcacgttggaacttt
caatgggatgatgttaatttctctaaagagtgcaagtcttcagcttttgattggaaaaag
ctgtacatagaaaaatacagactgcagctaaactggttgaagggaaggtgcaacgttagg
acatttgaaggtcattctcaaggtgtgtcttgtctacagtttgatgatacgaggattgtc
agcggatcgtctgacaacacaattaaggtatggaacataagaaccaacagctcttgggct
gttcaaacgctggttggccactcaggtaaagtaagatgcttgcacctggatcacagcagg
ctggtcagcgggtcggctgatctaacgataaaggtggtgtgggacctatctttgaagaag
aattgggccagcattgcgtgtaaagttactatgattggacacacagatacagtcaggtgt
ttaaaagcagatgacacaaaagtgataagcgggtcgtacgacaaaacgataaagatttgg
aacattaaaaatggagcatgcgaaaacaccttgagaggccatgaaggggcggtgttatgc
atttattttgatcaggacagaatcatatcaggctcaagtgattcaacaataaaggtgtgg
tcaacaagcacaatgacttgcattcaatcactgactggacatttggatgctgtgagctgt
ctgcagtttgttaataacaaaatcgtcagcggttcactcgactgcacactcagatactgg
gacttgaggtctgccagttgtgtgaaggtcatcgattggatggcgtctgaaggccacaca
agggtcatcaggttgtgtcttcaggtcgataaaagcagagtagttagtgcatcagatgac
aaaacaattaaagtttggagtttagaaacaggcaagcgtttggttacactaaaaaaccac
acggatggggtgacgtgtttgcagttcaatgaggatatgatcgtgtcaggctcctatgat
aaaaccgttaaacttttggactttagttgttgttga
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