KEGG   Helobdella robusta: HELRODRAFT_86393
Entry
HELRODRAFT_86393  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
hro  Helobdella robusta
Pathway
hro03420  Nucleotide excision repair
hro04120  Ubiquitin mediated proteolysis
hro04141  Protein processing in endoplasmic reticulum
hro04310  Wnt signaling pathway
hro04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    HELRODRAFT_86393
   04120 Ubiquitin mediated proteolysis
    HELRODRAFT_86393
  09124 Replication and repair
   03420 Nucleotide excision repair
    HELRODRAFT_86393
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    HELRODRAFT_86393
   04350 TGF-beta signaling pathway
    HELRODRAFT_86393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hro04121]
    HELRODRAFT_86393
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_86393
Enzymes [BR:hro01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     HELRODRAFT_86393
Ubiquitin system [BR:hro04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   HELRODRAFT_86393
  Multi subunit type E3
   SCF complex
    Ring finger protein
     HELRODRAFT_86393
   Cul2 complex
     HELRODRAFT_86393
   Cul3 complex
     HELRODRAFT_86393
   Cul4 complex
     HELRODRAFT_86393
   Cul7 complex
     HELRODRAFT_86393
   Cul8 complex
     HELRODRAFT_86393
   Cul9 complex
     HELRODRAFT_86393
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      HELRODRAFT_86393
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      HELRODRAFT_86393
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 20216613
NCBI-ProteinID: XP_009026047
JGI: Helro1_86393
UniProt: T1G6B6
LinkDB
Position
Unknown
AA seq 87 aa
WNAVALWAWDIVVDNCAICRNHIMDHCIECQANQASATSEECTVAWGVCNHAFHFHCISR
WLKTRQVCPLDNREWEFQKLVLVSVLW
NT seq 264 nt   +upstreamnt  +downstreamnt
tggaatgcagtggctttgtgggcatgggatatcgtagtagacaattgcgccatatgccgg
aatcatataatggaccattgcatagaatgccaggcgaaccaggcgtcagcaactagtgag
gaatgcacggtggcttggggggtctgcaatcatgcctttcacttccactgcatatctcga
tggctgaagaccaggcaggtctgcccactggacaacagggagtgggaattccaaaagttg
gttttggtttcagttttgtggtga

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