Hymenobacter sp. BT18: HER32_03510
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Entry
HER32_03510 CDS
T06970
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs01501
beta-Lactam resistance
hrs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HER32_03510
01503 Cationic antimicrobial peptide (CAMP) resistance
HER32_03510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrs02000
]
HER32_03510
01504 Antimicrobial resistance genes [BR:
hrs01504
]
HER32_03510
Transporters [BR:
hrs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HER32_03510
Antimicrobial resistance genes [BR:
hrs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HER32_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF3627
Motif
Other DBs
NCBI-ProteinID:
QIX60303
LinkDB
All DBs
Position
complement(848486..851677)
Genome browser
AA seq
1063 aa
AA seq
DB search
MFSKFIRRPVFAIVISVSILLMGALAIFQLPTSQFPEISPPLVMVSASYPGASAKVLTES
VLIPLEQAVNGVPGMKYMTSDAVSAGEANIQIVFNLGTNPDQAVVNVNTRIAQVLNRLPL
LVQREGVIVNRVVPNMLMYVNLYSKDKNTDMKYLFNFAGVNMIPELQRLNGIGRASILGS
RQYAMRVWLKPDRMRAYNISVDDVMKALEEQSVIGSPGRIGRADGKSAQSLEYVLSYQGR
FNDVEQYKNVILRANSNGESLHLRDVANVELGSEYYDIYSNLNQYPSAAIVLKQTYGSNA
SDVIKEVKAKLEELKKTSFPPGMDYKITYDVSNFLDASIENVIHTLRDAFILVALVVFLF
LGDWRSTLIPALAVPVSLVGSFMAMQAFGLTINMITLFALVLSIGIVVDNAIVVIEAVHA
KMEEEHLSPYNAVRLVVGEISGAIIGITIMMTAVFIPVSFMSGPVGIFYRQFSITMATAI
VISGLVALTLTPVLCAMILKNHHGQPKKQTPLQRFFDWFNRGFEKLTNAYTGLLQRIVAN
RVVTFVMLIAFGLGIWAITAKLPAGFIPSEDQGLIYAIVQTPPGTTLEQTNAVSQRLAGL
AKDIPGVANISSLAGYEVLTEGRGSNAGTLLLDLKPWSERKESIAEIIEKLEEKAHEIPG
ATIEFFEPPAVPGYGAAGGFQLQLLDKTNSGDYKALEKVNAEFMAKLKKRKELTGLFTFF
SANYPQYELKIDNDLAMQKGVSIGNAMNTLSVLVGSTYELGFIKYQRFFKVFVQASPEYR
KLPEDVLNMWAKNDKGEMVPFSAFMKIVKTQGANEINRYNMYTTASIRGGAAPGFSSGEA
IKAVQEVAQDLPHGYDIDWGGLSKDEVGRGNESTIIFLVVLVFVYLVLAAQYESFLLPLA
VIFSLVAGVFGSFLFIKIFGLANDIYAQVGLVMLVGLLGKNAVLIVEFAALKHEEGMSVR
DAAIEGARVRFRPILMTSFAFIAGLIPLVVATGAGAIGNRTIGSSALGGMLFGTVFGVII
IPGLYYFFGTLAGNSKLIRDENEAPILEGVEPRVQLEEMEPYA
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtaaattcattcgacggccggtttttgccatcgtcatctcggtgtccatcctg
ctgatgggcgcgctggccatcttccagctgcctacctcgcagttcccggaaatctcgccc
ccgctggtgatggtgagtgcctcgtaccccggggctagcgccaaggtactgaccgagtcg
gtgctgattccgctggagcaggccgtaaacggcgtgcccggcatgaagtacatgacctcc
gacgccgtatcggccggcgaggccaacattcaaatcgtgttcaacctgggcaccaacccc
gaccaggccgtggtgaacgtgaatacccgcattgcgcaggtgctcaaccgcctgccgctg
ctggtgcagcgcgagggcgtgattgtgaaccgcgtggtgcccaacatgctgatgtacgtg
aacttgtactcgaaagacaaaaacacggacatgaagtacctgttcaactttgccggggtg
aacatgatacccgagctgcagcgcctcaacggcattggccgcgccagcatcctgggcagc
cggcagtacgccatgcgcgtgtggctcaagcccgaccggatgcgcgcctacaatatctcc
gtcgacgacgtgatgaaggccctggaagagcagagcgtgattggctccccgggtcgtatc
ggccgggccgatggcaaaagcgcccagtccctggagtacgtgctcagctaccagggccgc
ttcaacgacgtggagcagtataaaaacgtgattctgcgggccaattccaacggggaaagc
ctgcacctgcgcgacgtggccaacgtggaactgggctcggaatactacgacatctactcc
aacctgaaccagtatccctcggcggctattgtgctcaagcaaacctacggctccaacgcc
tcggacgtaattaaagaagtgaaggccaagctggaggagctcaagaaaacgagcttcccg
cccggcatggactacaaaatcacctacgacgtgtcgaacttcctcgacgcctcgattgag
aacgtaatccacaccctgcgcgacgccttcatcctggtggccctggtggtgttcctattc
ctcggcgactggcgctccacgctcatcccggccctggccgtgcccgtgtcgttggtagga
tcctttatggccatgcaggcctttgggctcaccatcaacatgattacgctgtttgccctg
gtgctttcgattggcattgtggtggacaacgccattgtggtgattgaggccgtgcacgcc
aagatggaggaggagcatctttcgccctacaacgcggtgcgcctcgtggtgggcgaaatc
agcggggccatcatcggcatcaccatcatgatgacggccgtgttcatcccggtgtcgttc
atgagcggcccggtgggcattttctaccggcagttctccatcaccatggccacggctatt
gtgatttcgggtctggtggcgctgactttgacgccggtgctctgcgccatgatcctgaaa
aaccaccacggccagcccaagaagcagacgcccctgcagcgtttcttcgactggtttaac
cgcggcttcgaaaagcttaccaacgcctataccggtctgctgcagcgcattgtggcaaac
cgcgtggtcacctttgtaatgctcattgcttttgggctgggcatctgggccattacggcc
aagctgccggcgggctttatcccgagcgaagaccagggcctgatttacgccatcgtgcaa
accccgccgggcaccacgctggagcaaaccaacgccgtgtcgcagcgcctcgcgggccta
gccaaggacattcccggcgtggccaatatttcctcgctggcgggctacgaagtactcacc
gaaggccgcggctccaacgccggtaccttgctgcttgacctgaagccgtggtcagagcgc
aaggagtccattgctgaaattatcgaaaagctggaggaaaaggcccacgaaattccgggc
gcgaccatcgagttcttcgagccaccagcagtacctggctacggcgcggcgggcggcttc
cagctccaactgctcgacaaaaccaactccggcgactacaaagccctggaaaaagtgaat
gccgagtttatggccaagctcaagaagcgcaaggagctaaccggcctatttactttcttc
tcggccaactatccgcagtacgagctcaagattgacaacgacctggccatgcagaagggc
gtgagcatcggcaacgccatgaacaccctgtcggtgctggtaggctccacctacgagctg
ggcttcatcaagtaccagcgcttcttcaaggtgtttgtgcaggcctcgccggagtaccgc
aagctgcccgaagacgtgctgaacatgtgggccaaaaacgacaaaggcgaaatggtgccc
ttctcggccttcatgaagattgtgaagacccagggtgccaacgaaatcaaccgctacaac
atgtacaccacggcctccatccgcggcggcgcagctcccggcttcagctcgggcgaggcc
atcaaggcggtgcaggaagtggcccaggacctgccccacggctacgacatcgactggggc
ggcttgtcgaaggacgaagtaggccgcggcaacgagtcgaccatcattttcctggtcgtg
ctggtgttcgtgtacctggtgctggccgcgcagtatgaaagcttcctgctgccgctggcc
gttatcttctctctcgtagcgggcgtgttcgggtccttcctgttcattaagatatttggc
ttggccaacgacatctacgcccaggtgggcctggtcatgctcgtcgggttgctggggaaa
aacgcggtactgattgtggaattcgcggccctgaagcacgaggaaggcatgagcgtccgc
gacgcggccattgaaggcgcgcgggtacgtttccgccccatcctgatgacgtccttcgca
tttattgccggcctgattccgctggtggtagctaccggcgcgggagcaatcggcaaccgt
accattggctcctcggccctgggcggcatgctgttcggcaccgtgttcggggtaatcatc
atccccggcctgtactacttcttcggcacgctggccggcaacagcaaactgattcgggac
gaaaacgaagcccccatcctcgaaggcgtagagccccgcgtgcaactggaagaaatggag
ccttatgcttaa
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