Hymenobacter sp. BT18: HER32_15920
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Entry
HER32_15920 CDS
T06970
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs01501
beta-Lactam resistance
hrs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HER32_15920
01503 Cationic antimicrobial peptide (CAMP) resistance
HER32_15920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrs02000
]
HER32_15920
01504 Antimicrobial resistance genes [BR:
hrs01504
]
HER32_15920
Transporters [BR:
hrs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HER32_15920
Antimicrobial resistance genes [BR:
hrs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HER32_15920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QIX62579
LinkDB
All DBs
Position
complement(3702888..3705968)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSLSSTSINRPVLAIVMSLVIVIFGVIGFRYLSVREYPSVDPPIITVSASYTGASADVMQ
GQVTEPLEEALNGIQGIKNLTSNSRDGRTQITVEFDLDADLETAANDVRDKVSGAQGRLP
RDIDPPVVSKANADSQPIVMTYLSSNKRTLLELTDYANNTLKERLQTIPGVSEVRVYGER
KYSMRLWLDPVKLSALSVSPVDVQQALTRENVELPSGSVQGQATQLTLRTMGRLSTVEDF
NNLIIRKDESSLVRLSDIGYAELYPENDQTIFKVNGVPMVGLAVIPQPGSNQIDIADEFN
KRLEQYGKDLPKDLELRPGFDNSVFIRKSINEVEHTIIEAFVLVVVIIFLFLRDWRSTII
PVVAIPVSLVGIFFVMYLMDFSINVLTLLAVVLAIGLVVDDAIVVLENIYSRIEEGENPK
TAAIKGSEEILMAVVSTTIVLAAVFLPVVFLTGITGRLFREFGIVVAGSVLISAFVSLTL
TPMMCSVLLKREEKHNWFYRKTEPFFEKMIGGYKESLETFLRNRWLAWLVVAGTGVGIWY
FMGAIPSELAPVEDRSRINLNATGPEGASFEFMDTYMTQLTQMAMDSAGKQNLSSVFAVT
SPGFGGGANSGIARVLLLEADARPLPQPAIADKLSAGVKKLSAARTSVSQDQSIGGGGGG
LPVQFVIQTQDFDKLRTAVPKFLDAARQDPTFQFVDVNLKFNKPELRVNIDREKAQSLGV
SVQSISQTLQSGLSGQRYGYFIREGKQYQIIGQVAREDRSQPLDVRLLSVKNAQGELIQL
DNVIRLEESSTPPQLYRFNRYNSATFSASLAPGRTLGDGIAAMQAIADKNLDDTFSTELA
GASRDFQESSSSLVFAFGLALVLIYLVLAAQFESFRDPVIIMVTVPLALSGALLSLWYFN
QTLNLFSQIGIIMLVGLVTKNGILIVEFANQQVENGKDYMTGLIEGATARFRPILMTSLC
AILGILPIAIATGAGALSRRAMGIGVVGGLFFATALTLYVVPVMYSYFATAKKHKPAAAA
EKAVAA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatcctccaccagtatcaaccgcccggttctcgccattgtgatgagcctggtg
attgtgattttcggggtgattgggtttcggtacctgagcgtacgggaatatccgagcgtg
gacccgcctatcatcaccgtatcggcctcctacaccggggcctcggccgatgtgatgcag
ggccaggtgaccgaacccctggaagaagccctcaacggcatccagggtatcaagaatctg
acctccaactcccgcgacgggcgcacccagattacggtggagtttgacctcgacgccgac
ctggaaacggcggccaacgacgtgcgcgacaaagtatcgggcgcgcagggccgcctcccg
cgcgacattgaccctcccgtggtgagcaaggccaacgccgactcccagcccattgtgatg
acgtacctgagcagcaacaaacggacgctgctggagctgacggactacgccaacaacacc
cttaaggagcgcctgcagaccattcccggcgtgtcggaggtgcgggtgtacggggagcgg
aagtactccatgcgcctgtggctggacccggtgaaactctcggccctaagcgtgagcccc
gtggacgtgcagcaggccctcacccgcgaaaacgtggagctacccagcggctcggtgcag
gggcaggctacccagcttacgctccgcaccatgggacgcctgagcacggtggaggatttt
aacaacctgattattcgtaaggacgaatcgtcgctggtgcggctttcggacatcggctac
gccgagctttaccccgaaaacgaccagaccatcttcaaagtaaacggcgtaccgatggtg
ggcctggccgttattccgcagccgggctccaaccagattgacattgccgacgagttcaac
aagcgcctggagcagtacggcaaggacctgcccaaagacctggagttaaggccgggcttc
gacaactcggtctttatccgcaagtctatcaacgaggtggaacacaccatcattgaggcc
ttcgtgctggtagtggtgattatcttcctgtttctgcgcgactggcgctccaccatcatc
ccggtggtggccattccggtgtcgttggtaggcatcttcttcgtgatgtacctgatggat
ttctccatcaacgtgctcacgctgctggccgtggtactagccattggcctggtagtcgac
gacgccattgtggtgctggaaaatatctactcccgcattgaggaaggtgagaaccccaaa
acggccgccattaagggctccgaggaaattctgatggccgttgtcagtaccacgattgtg
ctggcggcggtgtttctgccggtggtgtttctcacgggcatcaccgggcggctgttccgg
gagtttgggattgtggtggccggctcggtgctgatttcggcgtttgtgtcgctcacgctc
acgcccatgatgtgctccgtgctgctcaagcgcgaggaaaagcacaactggttttaccgc
aaaaccgaacccttcttcgagaagatgattggcggctacaaggagagcctcgaaaccttc
ctgcgcaaccggtggctggcctggctggtggtggcgggcacgggcgtaggtatctggtac
ttcatgggcgccattccctcggaactggccccggtggaagaccgcagccgcatcaacctg
aacgcgactggtccggagggggcctcgtttgagttcatggatacctacatgactcagctt
acccaaatggccatggactcggctggtaagcagaatttgagcagcgtgtttgccgtgacg
tcgccgggcttcgggggtggggcaaactcgggcattgcccgggtattgctgctggaagcc
gatgcccgccctctgccccagcccgccattgccgataagctcagcgcgggcgtgaaaaag
ctctcggcggcccgcacctccgtgagccaggaccagagcatcgggggcggaggaggtggc
ttgccggtgcagttcgttattcagacccaggatttcgacaagctgcgcacggccgtgccc
aagttcctggatgcggcccgccaggatcctactttccagttcgtagacgtgaacctgaag
ttcaacaagcccgagctgcgcgtaaacatcgaccgggaaaaggcccagagcctgggcgta
tcggtgcagagcatcagccagactttgcaatcgggcttgagcgggcagcgctacggctac
tttatccgggaaggcaagcaataccagattatcggacaggtggcccgcgaagaccgcagc
cagcctctggatgtgcgcctgctctcggtgaagaatgcccagggggagctgattcagcta
gacaacgtgattcggctggaggaaagcagcaccccgccccagctttaccgcttcaaccgc
tacaactcggccaccttctcggcttcgctggcgcccggccgcaccctcggcgacggtatt
gccgccatgcaagccattgccgacaagaacctcgacgacaccttctcaacggagctggcc
ggcgcttcccgcgacttccaggaaagctccagcagcctggtatttgccttcgggctggcg
ctggtcttgatttacctggtgctggcagcccagtttgagagcttccgcgacccggtcatt
atcatggtcacggtgccgctggccctgtccggcgcactgctcagcctatggtacttcaac
cagacgctcaacctgttctcgcaaatcggtatcatcatgctcgtggggctggtgaccaag
aatggtattctcatcgtggagtttgccaaccagcaggtggaaaatggcaaggactacatg
accgggctgattgagggggccacggcccgcttccgccctattctgatgacgagcctctgc
gctatcctgggtatcctgcccattgccattgccaccggcgcgggcgcgctcagccggcgg
gccatgggcattggcgtcgtaggcgggctgtttttcgctacggccctcactctgtacgta
gtgcctgttatgtattcgtatttcgccacggccaaaaagcacaaacccgctgcggccgca
gaaaaagccgttgcggcctag
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integrated database retrieval system
