Hirundo rustica (Barn swallow): 120747926
Help
Entry
120747926 CDS
T09369
Name
(RefSeq) ryanodine receptor 1-like
KO
K04961
ryanodine receptor 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04020
Calcium signaling pathway
hrt04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120747926
04020 Calcium signaling pathway
120747926
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120747926
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120747926
04040 Ion channels [BR:
hrt04040
]
120747926
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120747926
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120747926
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Ryanodine receptor
120747926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RYDR_Jsol
RYDR_ITPR
RyR
Ins145_P3_rec
SPRY
MIR
Nop14
CDC45
Motif
Other DBs
NCBI-GeneID:
120747926
NCBI-ProteinID:
XP_039909920
LinkDB
All DBs
Position
39
Genome browser
AA seq
2973 aa
AA seq
DB search
MAEGEGEDDVQFLRTDDEVVLQCTTTLLKEQLKLCLSVEGFGNRLCSLEPTSNAQNVPPD
LAVCCFVLEQSLSVRALQEMLANSSEIGSESSQGGGHRTLLYGHAILLRHSHSGMYLSCL
TTSRSVTDKLAFDVGLQKDAAGEACWWTMHPASKQRSEGEKVRVGDDLILVSVSSERYLH
LSTASGELQVDASFMQTLWNMNPICSGCEEGYVTGGHVMRLFHGHMDECLTPTAPEQGEE
RSSVVNYEGPPPAELRHEQRQGRLRALRARQSLFQQEGMLTLVLSCIDRLSAYSTAAQFG
EAAGEEAAAAWKEIVNLLYELLASLIRGNRANCALFSTNLDWLVSKLDRLEASSGILEVL
YCVLIESPEVLNIIQENHIKSIISLLDKHGRNHKVLDVLCSLCVCNAVAVRSNQNLITEN
LLPRRDLLLQTGMVNYVTSVRPNLFVGTAPGSTQFRCWYFEVAVERVQPFVTPVPTHLRV
GWGAAGGFRPAPGGGSGWGGNGAGDDLNSFAFDGLHLWTGGVPKAVGSPQRRALAGGDVV
SCCLDLGVPSASFRLNGAPVQGVLEGFNLDTLFTPVASFSAGVRLRFLLGGRHGEFRFVP
PPGYAPCAEALLPRERLRLEPLTAYRGSAPPGARSLLGPTRALPHTAFTPCPVDTCQIVL
PPHLERIREKLAENIHELWALTRIEQGWTYGPVRDDVQRLHPCLLSFHSLPEPERGYNLQ
MSGETLKTLLALGCHVGMADEKAEENLKKIKLPKTYTMSNGYKPAPLDLSHVRLTPAQLT
LVDRLAENGHNVWARDRVQQGWTYSTTQDIKNKRNPRLVPYNLLDEGTKATNRESLCQAV
RTLLGYGYNIEPPDQDSPSQGAVPGGPRAPRPRLFRAERGSAVRSGKWYFEFEAVTPGEM
RVGWARPGLRPDTELGADDMAFVFNGHRAQRWHVGGESFGRSWQAGDVVGCLIDLGECHM
SFTLNGEVLIGDGGSEVAFRDFDVGDGFVPVCSLGLGQEGHLNLGQDVGTLRYFGICGLQ
EGYEPFAINMKRPIALWFSHSLPQFVPVPPEHPNLEVTRLDGTVDAPPCLRLSHRSSGTP
AAPPELLFLRLSLPVQFHPTFRCTPGATPLPQAPPPEPPEDLTESEFERLRRSAGPRSPE
GDEGAEKGAAPGAAPAREQPRGENEKDATTEKGKTRRGFLFKGRKTPFAPPPAPPPVPRL
EEDVVPDERDDPEVIMNTTTYYYSVRLFAGQEPGSAWVGWVTPHFHQHDPDFELGRVRSV
TVTMGDDRGNVHDSIKRSNCYMVWGGEFAAPTQQARVSHTDLVIGCLVDLATGLMTFTAN
GKEINTFFQVEPNTKLFPAVFVQPTTQNVLQFELGKLKNIMPISAAMFSSERQNPAPQCP
PRLVIQHLTPVTWSRMPTEYLGVESARLGERQGWAVECCQPLQMMALHIPEEDRCIDILE
LWEREDLLQFQCHTLRLYCAVCALGNNRVAHALCSHVDQAQLLFAIESPELPGPLRAGYY
DLLLAMHLDAAQRARSSMSAEFIVPISEATRAIALFPDGARCPGPPGVGPSACLRPQPHF
SEPCFVRVPSGRAPLSPAIPLDELGAKAMRMLAEAVAGGGPHARDPVGGSVEFQLVPVLK
LVSALLAVGALGDGDVRRVLRMIEPHVFGEARAARRDEEEEEEEEEGTKAIEAGEEEEEE
EEARRKKAIEAGELEEEEEEEVRRRKAIEAGELQEEEEDEEEARRTKAMEAGEGQEKEEE
EELEEGLLQMKLPESVKLQMCHLLQHLCERELQHRVEAIVAFSERHVQRLQRDQRRRYGR
LMRALTMSAAETARRTREFRSPPQEQINMLMQYKGGAEDEECPVPGDIRDELLDFHNDLL
AHCGIELAEEEEEEEEETSLRQRLMGLVQKVVGVRAPPKEEETPPEEPPVPSTLQELISQ
TMVHWAQESFIQSPALVRAMFSLLHRQYDALGELGRALPKAYAISATSVPDTTALLECLG
QIRSLLIVQMGPEEENLMIQSIGNIMNNKVFYQHPNLMRALGMHETVMQVMVSVLGGGES
KEIRFPKMVTNCCRFLCYFCRISRQNQRSMFDHLGYLLENSGIGLGMQGSTPLDVAAASV
IDNNELALALKEQDLEKVVTYLASCGLQSCPMLLAKGYPDIGWNPCGGEKYLDFLRFAVF
VNGESVEENANVVVRLLIRRPECFGPALRGEGGSGLLAAIQDALSIAQDPARDGPSGRRE
RRPFGPEEPPEENRVHLGHAIMSFYAALIDLLGRCAPEMHLIQAGKGEALRIRAILRSLV
PLEDLVGIISLPLQIPALGKDGNVVQPRMAASFVPEHKAPMVLFLDRVYGVQSQEFLLHV
LEVGFLPDMRAAASLDTATFSTTEMALALNRYLCLAVMPLITKCAPLFAGTEHRAIMVDS
MLHTIYRLSRGRALTKAQRDAIEECLMALCRYIRPSMLQHLLRRLVFDVPILNEFAKMPL
KLLTNHYERCWRYYCLPSGWPNMGVSSEEELHLTRKLFWGIFESLAHKKFEAELYRLAMP
CLCAIAGALPPDYVDASYSSRTEKKASVDAEGNFDPKPVETLNVIIPEKLDGFINKYAEY
THEKWAFDKIQNNWTFGETVDEEAKTHPMLRPYKTFSEKDKEIYRWPIKESLKAMLAWEW
TVEKAREGEDERAEKKKTRKISQNAQATYDPSHGYSPQPVDLSGVTLSRELQAMAEQLAE
NYHNTWGRKKKLELEAKGGGSHPLLVPYDTLTAKEKARDREKAQELLKFLQLHGYAVTRG
LKDMELDTSSIEKRFAFGFLQQLLRWMDIAQEFIAHLEAVVSSGRVEKSPHEQEIKFFAK
ILLPLINQYFHNHCLYFLSTPAQVLGSGGHASNKEKEMITSLFCKLAALVRHRVSLFGTD
APAVVNCLLILARSLDARTVMKSGPEIVKAGLRSFFESAAEDMEKLGEQLRLGRGTPTRA
PTKGVAQNVTYTSVALLPVLTALFEHLAQHQFG
NT seq
8920 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggggaaggagaggacgatgtgcagttcctgcgcacggatgacgaggtggtc
ctgcagtgcaccaccacgctgctgaaggagcagctcaagctctgcctgtcggtggagggc
ttcgggaaccgcctgtgctccctggagcccacctccaacgcacagaacgtccccccggac
ctggccgtgtgctgcttcgtgctggagcagtcgctgtcggtgcgggcgctgcaggagatg
ctggccaacagctccgagatcggcagcgagtcctctcagggtgggggtcaccggacgctg
ctctacggccacgccatcctgctgagacactcgcacagcggcatgtacctgagctgcctg
accacctcccgctcggtcaccgacaaactggccttcgacgtggggctgcagaaggacgca
gcaggagaggcgtgctggtggacgatgcacccggcgtccaagcagcgctcggagggagag
aaggttcgggtgggcgacgacctgatcctggtcagcgtgtcctcagagagatacctgcac
ctctccacggcctcgggggagctccaggtcgacgcctccttcatgcagacgctgtggaac
atgaaccccatctgctcgggctgcgaggaaggttacgtcaccggcggccacgtcatgcgc
ctgttccacggccacatggacgagtgcctgacccccacggcccccgagcagggcgaggag
cgcagcagcgttgtcaactacgagggcccgccgcccgccgagctgcgccacgagcagcgc
cagggccgcctgcgcgccctgcgggcccgccagagcctcttccagcaggaggggatgctg
acgctggtgctgagctgcatcgaccgcctgagcgcctacagcacggcggcgcagttcggg
gaggccgcgggcgaggaggcggcggccgcctggaaggagatcgtcaacctgctctacgag
ctgctggcctcgctgatccgagggaaccgagccaactgcgccctgttctccaccaacctg
gactggctggtcagcaaactggacaggctggaggcctcctcgggcatcctggaggtgctg
tactgcgtgctgatcgagagccccgaggtgctgaacatcatccaggagaaccacatcaaa
tccatcatctccctgctggacaagcacggccgcaaccacaaggtgctggacgtgctgtgc
tcgctgtgcgtgtgcaacgccgtggccgtgcgctccaaccagaacctgatcaccgagaac
ctgctgccgcgccgcgacctcctgctgcagaccggcatggtcaactacgtcaccagcgtg
cgccccaacctgtttgtgggcacggcgccgggctccacgcagttccgctgctggtacttc
gaggtggccgtggagcgggtgcagcccttcgtcacgcccgtgcccacccacctgcgcgtg
ggctggggggcggccgggggcttccggcccgcgccggggggcggctcgggctgggggggc
aacggagccggcgacgacctcaactccttcgccttcgacgggctccacctctggacaggg
ggtgtccccaaggccgtggggtcccctcagcgccgggctctggccgggggggacgtggtc
agctgctgcctggacctgggggtccccagcgcctccttccgcctcaacggggccccggtc
cagggcgtcctggagggcttcaacctcgacaccctcttcacccccgtggccagcttctcg
gcgggggtccggctgcggttcctgctggggggccggcacggcgagttccggttcgtgccc
cctcccggctacgctccgtgcgccgaggcgctgctgccccgcgagcggctgcgcctggag
ccgctgacggcgtaccggggctcggccccgcccggagcccgcagcctgctggggcccacc
cgcgccctgccccacaccgccttcaccccctgccccgtggacacctgccagatcgtgctg
cccccacacctggagcgcatccgggagaagctggcggagaacatccacgagctctgggcc
ctgacccgcatcgagcagggctggacctacgggcctgtccgggatgacgtgcagcgcctg
cacccctgtttgctgagcttccacagcctccccgagcccgagcgcggctacaacctccag
atgtcgggggagaccctcaagacgctgctggccctgggctgccacgtggggatggcggac
gagaaagctgaggagaacctgaagaagatcaaactgcccaaaacgtacaccatgtccaac
gggtacaagccggcgccgctggacctgtcgcacgtgcgcctgacgccggcgcagctgacc
ctggtcgatcgcctggccgagaacggccacaacgtctgggctcgggacagggtgcagcag
ggctggacctacagcaccacccaggacatcaagaacaagcggaacccgcggctggtcccc
tacaaccttctggacgaggggaccaaggccaccaaccgcgagagcctctgccaggccgtg
cggaccctgctgggctacggctacaacatcgagccccccgaccaggactcgccctcgcag
ggtgctgttcccgggggtccccgtgccccccggccgcggctgttccgtgcggagcggggc
tcggccgtgcgctcggggaagtggtacttcgagttcgaggccgtgacccccggggagatg
cgcgtggggtgggcgcggcccgggctgcgccccgacaccgagctgggcgccgacgacatg
gccttcgtcttcaacgggcaccgggcccagcggtggcacgtgggtggcgagtccttcggc
cggtcctggcaggccggggacgtcgtgggctgcctcatcgacctcggcgagtgccacatg
agcttcaccctcaacggcgaggtgctgatcggggacggcggctccgaggtggccttcagg
gacttcgacgtgggcgacggctttgtcccggtgtgcagcctgggtttggggcaggagggg
cacctgaacctgggccaggacgtgggcaccctgcgctacttcggcatctgcgggctgcag
gagggctacgagcccttcgccatcaacatgaaacggcccatcgccctctggttcagccac
agcctgccccagttcgtgccagtgccccccgagcaccccaacctggaggtgacccgcctg
gacggcactgtggacgcccctccgtgcctgcgcctgtcgcaccgcagctcgggcacgccc
gcggcgccccccgagctgctcttcctgcgcctcagcctcccggtgcagttccaccccacc
ttccgctgcacccccggcgccaccccgctgccccaggccccccccccggagccccccgag
gacctcaccgagtccgagttcgagcggctgcggcgctcggcggggccccgcagccccgag
ggggacgagggagccgagaaaggggcggcccccggagctgccccggcccgggagcagccg
cgaggggagaacgagaaggacgcgaccaccgagaagggcaagaccaggagggggttcctg
ttcaagggccggaagacgccgttcgcgccgccgcccgcgcccccgcccgtgccccggctg
gaggaggacgtggtgcccgacgagcgcgacgaccccgaggtcatcatgaacaccaccacg
tactactactcggtgcggctgtttgcggggcaggagccgggcagtgcctgggtgggctgg
gtcaccccccacttccaccagcacgaccccgacttcgagctggggcgggtgcgcagcgtc
accgtcaccatgggcgacgaccgcggcaacgtgcacgacagcatcaagcgcagcaactgc
tacatggtgtggggcggggagtttgcggcccccacgcagcaggccagggtgtcccacact
gacctggtcatcggctgcctggtggacctggccacggggctcatgaccttcaccgccaac
ggcaaagagatcaacaccttcttccaggtggagcccaacaccaagctgttcccggcggtg
tttgtgcagcccaccacccaaaacgtgctgcagttcgagctgggcaagctcaagaacatc
atgcccatctcggcggccatgttcagcagcgagcggcagaacccggcgccgcagtgcccg
cccaggctggtgatccagcacctgaccccggtcacctggagccggatgcccaccgagtac
ctgggcgtggagagcgcccggctgggcgagcggcagggctgggccgtggagtgctgccag
cccctgcagatgatggcgctgcacatccccgaggaggacaggtgcatcgacatcctggag
ctgtgggagcgcgaggacctgctgcagttccagtgccacaccctgcgcctctactgcgcc
gtgtgcgcgctgggcaacaaccgcgtggcgcacgcgctctgcagccacgtggaccaggcc
cagctgctcttcgccatcgagagccccgagctgccggggcccctgcgggccggctactac
gacctgctgctggccatgcacctggacgcggcgcagcgcgcccgctcctccatgagcgcc
gagttcatcgtgcccatctccgaggccacgcgcgccatcgcgctcttccccgacggcgcc
cgctgcccggggcccccgggcgtggggcccagcgcctgcctgaggccccagccccacttc
tcggagccctgcttcgtgcgcgtcccgtcgggccgcgctccgctcagccccgccatcccg
ctggacgagctgggcgccaaggccatgcgcatgctggccgaggccgtggccggcgggggt
ccccacgcccgggaccccgtcgggggcagcgtggagttccagctggtgcccgtgctgaag
ctggtgtcggcgctgctggccgtgggcgcgctgggcgacggcgacgtgcgccgcgtgctg
cgcatgatcgagccccacgtcttcggggaggcgcgcgcggcgcgcagggacgaggaggag
gaggaggaggaggaggaagggacgaaggccatcgaggctggcgaggaggaggaggaggag
gaggaggcgaggaggaaaaaggcaatcgaggccggagagctggaggaggaggaggaggag
gaagtgaggaggaggaaggccatcgaggctggagagctgcaggaggaggaggaggatgag
gaggaggccaggaggacgaaggccatggaggccggggaggggcaggagaaggaggaggag
gaagagctggaggaggggctgctgcagatgaagctgccggagtcggtcaagctgcagatg
tgccacctgctgcagcacctgtgcgagcgggagctgcagcaccgcgtcgaggccatcgtg
gccttctcggagcgccacgtgcagcggctgcagcgcgaccagcggcgccgctacggccgc
ctgatgcgggcactgaccatgtcggccgcagagaccgcccgcagaacgcgggagttccgc
tcgcccccgcaggagcagatcaacatgctgatgcagtacaagggaggggctgaggatgag
gagtgtccggtgcctggggacatccgggacgagctgctggacttccacaacgacctgctg
gcccactgcggcatcgagctggcggaggaggaagaggaggaggaggaggagacgtcgctg
cggcagcggctgatggggctggtgcagaaggtggtgggggtccgggccccccccaaggag
gaggagaccccccccgaggagcccccggtgcccagcacgctgcaggagctgatctcgcag
accatggtgcactgggcacaggagtcgttcatccagagcccggcgctggtccgggccatg
ttcagcctgctgcaccggcagtacgacgcgctgggcgagctgggccgggcgctgcccaag
gcctacgccatcagcgccacctccgtgcccgacaccacggccctgctcgagtgcctgggg
cagatccgctcgctgctcatcgtgcagatgggccccgaggaggagaacctcatgatccag
agcatcgggaacatcatgaacaacaaggtgttctaccagcaccccaacctgatgcgtgct
ctgggcatgcacgagacggtgatgcaggtgatggtcagcgtgctgggcggcggcgagtcc
aaggagatccggttccccaagatggtgaccaactgctgccgcttcctctgctacttctgc
cgcatcagccgccagaaccagcgctccatgttcgaccacctgggctacctgctggagaac
agcggcatcgggctgggcatgcagggctccacccccctggacgtggcggccgcctcggtc
atcgacaacaacgagctggcgctggccctcaaggagcaggacctggagaaggtggtgacg
tacctggccagctgtgggctgcagagctgccccatgctgctggccaagggctaccccgac
atcggctggaacccctgcgggggggagaagtacctcgacttcctgcgcttcgccgtcttc
gtcaacggggagagcgtggaggagaacgccaacgtggtggtgcggctgctgatccggcgt
cccgagtgcttcgggccggcgctgcggggcgagggcggcagcgggctgctggccgccatc
caggacgcgctgagcatcgcccaggacccggccagggacgggcccagcgggcgcagggag
aggaggccgttcgggcccgaggagccccccgaggagaaccgcgtgcacctgggccacgcc
atcatgtccttctacgccgccctcatcgacctgctgggccgctgcgcccccgagatgcac
ctgatccaggcggggaagggggaggcactgcggatccgggccatcctgcgctcgctcgtc
ccgctcgaggacctggtggggatcatcagcctcccgctgcagatcccggcgctgggaaaa
gacgggaacgtggtgcagccccgcatggccgccagcttcgtccccgagcacaaggcgccc
atggtgctgttcctggaccgcgtttacggggtgcagagccaggagttcctgctccacgtg
ctggaagtggggttcctgcccgacatgcgcgcggccgcctcgctggacacggcgacgttc
agcacgacggagatggcgctggcgctgaaccgctacctgtgcctggcggtgatgccgctc
atcaccaagtgcgcgccgctgttcgccggcaccgagcaccgcgccatcatggtggactcc
atgctgcacaccatctaccgcctgtcgcgcggccgcgccctcaccaaggcgcagcgcgac
gccatcgaggagtgcctgatggccctctgcaggtacatccgcccctccatgctgcagcac
ctcctgcgccgcctcgtcttcgacgtgcccatcctcaacgagttcgccaagatgcccctc
aagctgctgaccaaccactacgagcgctgctggaggtactactgcctgcccagcgggtgg
cccaacatgggcgtcagctccgaggaggagctgcacctcaccaggaaactcttctggggc
atcttcgagtccctggcgcacaagaagttcgaggccgagctctacaggctggccatgccg
tgtctctgcgccatcgccggcgcgctcccgcccgactacgtggacgccagctactcgtcc
cgcaccgagaagaaggcctcggtggatgctgagggcaacttcgaccccaaacccgtcgag
accctcaatgtcatcatccccgagaagctcgacggtttcatcaacaaatacgctgagtac
acgcacgagaagtgggcctttgacaagatccagaacaactggacttttggggagaccgtg
gatgaagaagccaaaacccacccgatgctgagaccctacaaaaccttctctgagaaggac
aaggagatttaccggtggcccatcaaggagtccctcaaggccatgctggcctgggagtgg
acggtggagaaggccagggagggggaggacgagcgcgccgagaagaagaaaacgcggaaa
atctcccaaaacgcccaggccacctatgacccctcccacggctacagcccccagcccgtg
gacctgagcggggtcaccctgtcccgggagctgcaggccatggcagagcagctggccgag
aactaccacaacacctggggccgcaagaagaagctggagctggaggccaagggggggggc
tcccacccgctgctggtgccctacgacacgctgacggccaaggagaaggcgcgggaccgg
gagaaggcgcaggagctgctcaagttcctgcagctgcacggatacgccgtcacacggggg
ctcaaggacatggagctggacacgtcgtccatcgagaaacgcttcgccttcggcttcctg
cagcagctgctgcgctggatggacatcgcccaggagttcatcgcgcacctggaggccgtg
gtcagcagcgggcgggtggagaaatccccccacgagcaggagatcaagttcttcgccaag
atcctgctgcccctcatcaaccagtacttccacaaccactgcctctacttcctgtccacc
ccggcccaggtgctgggcagcggcggccacgcctccaacaaggagaaggagatgatcacc
agcctcttctgcaaactggccgcgctcgtccggcaccgcgtgtcgctcttcgggacggac
gccccggccgtggtgaactgtctgctcatcctggcacggtccctggacgccaggacggtg
atgaagtcgggccccgagatcgtcaaggccggcctgcgctcgttcttcgagtcggccgcc
gaggacatggagaagttgggggagcagctgcggctgggccgggggaccccgacccgcgcc
cccaccaagggcgtggcccagaacgtcacctacacctcggtggccctgctgcccgtcctc
accgcgctcttcgagcacctggcgcagcaccagttcgggg
DBGET
integrated database retrieval system
