Hirundo rustica (Barn swallow): 120748630
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Entry
120748630 CDS
T09369
Symbol
PHC1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120748630 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120748630 (PHC1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
120748630 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
120748630
NCBI-ProteinID:
XP_039911180
LinkDB
All DBs
Position
2:30614819..30632758
Genome browser
AA seq
1010 aa
AA seq
DB search
METESEQNSNSTSGSSSSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QFNSAQLHSLAAVQQATIAASRQASSPNTSTSQQTTTTQASLHANSDSQAQHTNEINLAT
TSAAQLISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGR
NVPLASQLILMPNGAVAAVQQEVPPTQSPGVHADTDQVQNLAMRSQQTSAANAQLQGSAQ
KTALPGSSQASGLPQAASTGQAVAVAQASSGAAGQSLNLSQGAAGGNGVSGGVVAGGGGQ
PSVGLSQSSSAGAAGSCQRKGTGVVQPLPVAAAQAVTVSQGSQTETENAAAKKGDADSGG
QQTVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHHQQQ
FQHRQSQLLHTATHLQLAQQQQQQQAASLTPQQQQQAQPPQQQAPPQNQQQAQTLVVQPM
LQSQPQHLQLQQDSPCQPATKSPVPIQSKSLVTPIKPPQLGPAKMSATQQPPPHIPVQVV
GTRQQGSGQAQALGLAQIAAAVPTSRGMPAVVQPVSQSHAASPSSSSAPASSQEAPPLTT
GVNLAQVQGTAHMVKSPASSPVVAQMPAAFYMQSVQLPGKSQTLPVKRKAESEEEKEEPP
SVTALLPARSSPATDSPKNMEEKSGLGDNSDTAAIATPNATSSEGASATPTSASTPNLAL
VSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPVQGEAPSGQN
ENLSSNSLGEDSASMELDKKANLLKCEYCGKYAPATQFRGSKRFCSMTCAKRYNVSCSHQ
FRLQRKKMKELQEANYARVRRRGPRRSSSEIARTKIQGKRHRGQEDSSRGSDNSSYDEAL
SPTSPGPLSVRASHGERDLANSNMAPPTPDLHGINPVFLSSNPSRWSVEEVYEFIASLQG
CQEIAEEFRSQEIDGQALLLLKEEHLMSAMNMKLGPALKICAKINVLKET
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaagtgagcagaactccaactccaccagcgggagctccagttctggagga
agcacccgtcctcagatctcgcagatgtctctgtatgagcggcaggcagtgcaggccctg
caggcactccagagacagcccaatgcagcccagtacttccatcagtttatgctccagcag
cagtttaacagtgcccaacttcacagcctggctgctgtccagcaggctacaattgcagcc
agtagacaggccagctcccccaacactagcacctcgcaacagaccaccaccacccaggct
tctttgcatgctaacagtgattctcaggctcagcatacaaatgagatcaaccttgccacc
acctcagctgctcagctgatcagtcggtcccagagcgtgagttccccgagcgccacgacg
ctgacccagtctgtgctcctcgggaacaccacctcacctcctctcaaccagtcacaggca
cagatgtaccttcggccgcagctggggaacctgttacaggtgaaccggaccttgggccgc
aatgtgcctctcgcctcccagctgatcctgatgcccaatggggctgtggctgctgtccag
caggaggtgccacccactcagtctcctggggtccatgcagacacagaccaggtgcagaac
ttggctatgaggagccagcagacctctgccgctaacgcccagctccaaggctctgctcag
aagacagccctgccaggaagctcccaggcttcgggcttgccgcaggccgccagcacgggc
caggccgtggcagtggcgcaggcctcctccggcgcggcggggcagtccctcaacctgagc
cagggagccgcgggcggcaacggcgtctccgggggcgtggtggccggtggcggcggccag
ccctccgtgggactgagccagagctcctcggcaggtgccgccggcagctgccagaggaag
ggcaccggggtggttcagccgctgccggtggcggctgcccaggccgtgaccgtcagccag
gggagccagacggagacggagaacgcggccgcgaagaagggcgacgcggacagcggcgga
cagcaaacggtgggcatgaacctcaccaggaccgccacgccggcacccagccagacgctg
atcagctcggcgacatacacgcagatccagccacactcactgatccagcagcagcagcag
atccatctgcagaagcaggtggtgatccagcagcagatagccattcatcaccagcagcag
ttccagcaccgccagtcccagctcctccacacggccacccatctccaactggctcaacag
cagcaacagcagcaagcagcatctctgaccccgcagcagcagcagcaagctcagcctccg
cagcagcaggctcccccccaaaaccagcagcaggcacagacccttgtggtgcaacctatg
ttgcagtcccagccacagcatttacagctccagcaggacagtccgtgccagccggccacc
aagtcacccgttcctattcagtcaaaatctctggtcacccccatcaaaccccctcagctt
gggcctgccaaaatgtcagcaacgcagcagcctccgccacacatcccggtgcaggtcgtg
ggcactcggcagcagggctcaggccaagcccaagcgctgggcttggctcagattgctgcg
gcagtgccgacatcccgggggatgccggctgtagtccagcctgtttcccaaagccatgct
gcttccccatcgtcatcttcggctccagcatcctcacaggaagctccccctctcaccaca
ggggtgaatttggcacaagttcaaggcacagcccacatggtgaagagcccagcttcctct
ccagttgtggctcagatgccagcagcattctacatgcagtctgtccagttgccaggcaaa
tctcagaccttgccagtaaagcgcaaggcagagtcagaggaggagaaggaggagccgccc
agtgtcaccgcactcctgcctgccaggtcctctcctgcaacagacagccccaaaaacatg
gaggagaagagtggccttggagataactctgatactgctgccattgcaaccccaaatgcc
acatcaagtgaaggagcctcagccacccccacctctgcttcgaccccaaacctggcattg
gtgtcacgtcagatgggagactccaaacctcctcaagccatcgtcaagccccagatcctc
acacacatcattgaaggctttgtcatccaggagggagcagagccctttccagtgggttgt
tctcagctgctgaaagaatctgagaaaccagtgcaaggagaggctccttctggccagaat
gaaaacctgtccagcaattctctgggagaggatagtgcttccatggagcttgacaagaag
gcaaacttgctgaagtgtgaatattgtgggaagtatgccccagcaacccagttccgcggc
tccaagaggttttgttccatgacctgtgctaaaaggtacaatgtcagctgcagccatcag
tttcggctgcagagaaagaagatgaaggagctccaggaagccaactacgcccgtgtgcgc
cgacggggaccacggcgcagcagctccgaaatcgctcgaacaaagatccagggcaaacgc
cacaggggccaggaggactcaagtcgaggctctgataactccagctatgatgaagctttg
tcccctacatctccaggacccctgtcagtaagggccagtcatggagagagggacctggca
aactctaatatggctccccctaccccagatctacatggcatcaacccagtcttcctgtcc
agcaatcctagtcgttggagtgtggaggaagtgtatgagttcattgcatcgttgcaaggg
tgccaggaaattgctgaggaatttcgatcacaggaaattgatggtcaggccctgttgctt
ctgaaagaggaacatctcatgagtgccatgaacatgaagctgggaccagctctcaagatc
tgtgccaagatcaatgtcctcaaggagacctaa
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