Hirundo rustica (Barn swallow): 120749319
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Entry
120749319 CDS
T09369
Name
(RefSeq) cystathionine beta-synthase-like protein
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00260
Glycine, serine and threonine metabolism
hrt00270
Cysteine and methionine metabolism
hrt00670
One carbon pool by folate
hrt01100
Metabolic pathways
hrt01230
Biosynthesis of amino acids
Module
hrt_M00035
Methionine degradation
hrt_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120749319
00270 Cysteine and methionine metabolism
120749319
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120749319
Enzymes [BR:
hrt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
120749319
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GFIT
Motif
Pfam:
PALP
CBS
DUF1414
Motif
Other DBs
NCBI-GeneID:
120749319
NCBI-ProteinID:
XP_039912540
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Position
2:114150172..114175737
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AA seq
567 aa
AA seq
DB search
MEKFVSERPVPMSKNEIPTLPSQKKPDTNSCPHAPAKYIVPGGVDAENCKASEKERQWIR
PDTPSKCTWKLGKPLSASPHHHATLPEPPKILPSILNKVGNTPLVRINKIGKHFGLKCEL
LAKCEFFNAGGSVKDRISLRMVEDAEKAGILKPGDTIIEPTSGNTGIGLALAAAVKGYRC
IIVMPEKMSMEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNAHILDQYRN
ASNPLTHYDTTAEEILQQCDGKVDMVVATAGTGGTITGISRKLKEKCPGCKIIGVDPEGS
ILAEPEELNKTDKTMYEVEGIGYDFVPTVLDRSTVDQWYKSNDEESFALARMMIREEGLL
CGGSSGSAMSVAVKAAKELKEGQRCVVICPDSIRNYMSKFLSDKWMIQKGFMKEEDLGNK
PWWWNISIQELSLSAPLTVLPTVTCAKTVEILREKGFDQVPVVDESGVILGMVTLGNMLS
SLLVGKVKPSDEVRKVIYKQFQQINLKDNLGKLSHILEIDHFALVVHEQIQYHTDGSSSK
RQMVFGIVTAIDLLNFVTARERERKSN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtttgtatcagaaaggcctgttcccatgtctaagaatgaaatccctactctt
ccctcccagaagaagccagatacaaactcatgccctcacgcacctgccaaatatattgtc
cctggtggggtggacgctgagaactgcaaggccagtgagaaggaaaggcagtggatccgc
cctgacacacccagcaaatgcacctggaagcttgggaagcccctctctgcctccccccac
catcatgccaccctgccagagcctccgaagatcctgccaagcatcctgaataaagttggc
aacacgcctttggtgcggatcaacaagattgggaagcactttgggctcaagtgtgaactc
ttggccaagtgcgagttcttcaatgccgggggcagcgtgaaggaccgcatcagcctcagg
atggtggaggatgctgagaaggctgggatcctcaaacctggggacaccatcattgagccc
acctctgggaacacagggatcgggctggcgctggcggcggcagtgaagggttaccgctgc
atcatcgtcatgccggagaaaatgagcatggagaaggtggatgtcctgagagctctgggc
gctgagattgtgaggaccccaactacagccagatttgattctcctgaatctcacgtggga
gtggcctggagattgaagaatgaaatccccaatgcacacatcctggaccagtaccgcaat
gccagcaaccccctgacacactacgacaccacagctgaggagatcctgcagcagtgtgat
gggaaggtggacatggtggtggccacggctggcacaggaggcaccatcactggcatctcc
aggaagctgaaggagaagtgtccagggtgcaaaattataggtgtggatcctgaaggctcc
atccttgctgaacccgaagaactgaacaagactgacaagacaatgtatgaagtggaagga
attggatatgattttgtccccacagtgttggatagatctacagtggaccagtggtacaag
agcaatgatgaggagtcgtttgccctggcacggatgatgatccgcgaggaggggctgctg
tgcggtggcagctcgggcagtgccatgtctgtggctgtgaaggcggccaaggagctgaag
gagggtcagcgctgtgttgtcatctgccctgactccatcaggaactacatgtccaagttc
ttgagtgacaaatggatgattcagaaagggttcatgaaggaagaagaccttggcaacaaa
ccttggtggtggaacatcagtattcaggagctgagcctctctgcccctctgactgtgctt
ccaactgttacctgtgccaagactgtggaaattctccgggagaagggattcgaccaggta
ccggttgttgatgaatctggggtgattctgggcatggttaccctgggtaacatgctttcc
tcactgcttgttggaaaagtcaagccttctgatgaagtcaggaaagtaatctacaagcaa
tttcaacagattaacctgaaagacaacttggggaaactctctcacatcctggaaatagac
cactttgctttggtggttcatgaacaaattcaatatcacacggatggctcctccagcaag
cggcagatggtgtttggcatcgtgacagccatcgacctcctgaactttgtcaccgcgcgg
gagcgggagaggaaatccaactaa
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