Hirundo rustica (Barn swallow): 120750145
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Entry
120750145 CDS
T09369
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120750145 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120750145 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120750145 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
120750145
NCBI-ProteinID:
XP_039914333
LinkDB
All DBs
Position
3:37573886..37760429
Genome browser
AA seq
1668 aa
AA seq
DB search
MGRIGWGFLLLLLAACALLSPGLAASEKGRLRRITYVLQPGRGGSSGSRQQRPTLLGGEQ
QQQQQQRTFNVQLNTRYGGGSPERTRRMSKPGSAALQLRLGPAGQVHPNSAAHASSFAKP
ARFSPRLKAPPGPLGNSSAALPLRQKHQPPPLPGVNVCGGQCCRGWSKATGSQRCIKPNC
APPCQNGGMCLRPQLCVCKPGTKGNSCEDTVVQDTSSTGGRSPVVPPWPIPQQAAQQTFS
QKVQIPPKVGPMAQMAFTIKQKPPVGLTQQMQPQMIPLSSQTLMMNLHHGQTQEYVIKPK
YYPVKKMISGEQSTDGSLPLRLGQNQPASPLRLGNHTGRIKVVFTPSICKVTCTKGNCQN
NCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQI
PVQTASSPKLYHHQQQVNKAVGSQVIHSTHTLPLTMSGQQGVKVKFPPNIVNIHVKHPPE
ASVQIHQVSRIDSTSTGQKAKVPQPVHPQVSYQGLPYQKAQKGHTTYTNQQPIPHMFPVS
VKTQLGRCFQETVGTQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYGPMME
CPQGYKRINATFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFVPDPTLSRCIPDNPV
VAEEKGPCYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPG
GMGYTVSGPHRNKLYHHPAVRVQPPAIGKTPITQPVPKGTSPPPLPAKEEPVEALTFSQK
SETEMAVQEVATAAPDQELASIDQEKQPYLEPGQPQLSPGISTINLHPQFPVVIEKTSPP
LPVEVAPEVSTSSASQVIAPTQVTEINECTVNPDICGAGHCVNLPVGYTCICYKGYRLND
QQTKCIDINECNQAPHLCSLGRCENTEGSFLCICQAGFMASEDGTDCVDFDECSRPHTCG
EGFCINTLGSYRCEYCDSGYQMNRRGECEDIDECLTPTTCPDAQCLNAPGSYQCIPCRVG
FRGWNGQCHDINECQYGNHCTNGRCENTEGSFRCICAQGFKLSASKEQCEDINECQQRSV
CSNGRCRNTEGSFRCICSQGYSLSSTGDQCEDVDECLQDSNVCLRGSCINTEGSYKCTCP
DGFQQIANRGCQDINECERSDLCSPHGECLNTDGSYQCICERGFSVSADGRTCEDVDECT
NGTVCGSHGFCENMDGSYRCLCYQGYQDTQDGQGCTDVNECEMLSGVCGEALCENVDGSF
LCLCSDENQEYDPMTGQCRFRSSPEMPREADQQEDGKKECYYNLNDANFCDNVLTSNVTK
QECCCTLGAGWGDNCEIFPCPVVGTAEFTDLCPEGKGFIPSGESSYGLLAQNYKDADECQ
LFGQEICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPNSCIDGQCINTEGSY
NCFCTHPMVLDATEKRCIRPADSSEQTEEAEVYQDLCWQHLSDDFVCSRPLVGKQTTYTE
CCCLYGEAWGMQCALCPMKESEDYAQLCNIPVPGSRRPYGQDALVDFEEHYTPETNPYFV
EDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECNEL
NNRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNSEPESELE
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggatcggatggggcttcctcctcctcctcctcgctgcctgtgcacttttgtca
ccagggctcgcagcctccgaaaagggcaggctaaggaggatcacgtacgtcctgcagccc
ggccgggggggctcctctggcagccggcagcagcgcccgaccctcctcgggggggagcag
cagcagcagcagcagcagcgcacgttcaatgtgcagctgaacacgcgctacggcggcggc
tccccggagcggacccggcggatgagcaagccgggcagcgccgccctgcagctccgcttg
ggccccgccggccaggtccaccccaactccgccgctcacgcctcctccttcgccaagccg
gcccgcttcagcccgcggctcaaggcgccgccgggccccctcggcaacagcagcgccgcc
ctgccgctccgccagaagcaccagccgccgccgctgccgggggtcaatgtgtgcgggggg
cagtgctgccgcggctggagcaaggccacgggctcccagcggtgcatcaaacctaactgt
gcaccgccgtgccaaaatggagggatgtgcctgcgacctcagctttgtgtgtgtaaacca
ggaaccaaaggtaattcctgcgaggatacggtcgtgcaagacacatcttccactggaggc
cggagccccgttgttcccccgtggcccatcccccagcaggctgcccagcagaccttctct
cagaaggtgcagatccctccaaaggttggccccatggctcagatggcattcacaatcaag
cagaagcctcctgttgggttaactcagcaaatgcaaccacagatgatacccctttcatct
cagacactaatgatgaatcttcatcacggccaaacacaggaatatgtgattaagcccaaa
tattacccagtaaaaaaaatgatttcaggagagcagtccactgatggctcattaccactg
agactgggccagaatcaacctgcatcacctttgcgattgggaaatcacactggtcgcatc
aaggtggtctttacacccagcatctgtaaagtgacttgtaccaaaggcaactgtcagaac
aactgtgagaagggaaatacaaccaccctcatcagtgagaacggccacgctgctgacact
ctgacagccactaacttccgagtagttatttgccaccttccatgcatgaatggaggccag
tgtagttctagagataagtgccagtgccctcctaattacactggtaaactctgtcagatt
cctgtgcagactgccagttctccaaaactctaccatcaccaacaacaggtgaacaaggct
gtaggatcacaagttatccactctactcatactttaccactgacaatgtctggacagcaa
ggtgtaaaagtgaagttccctcctaacatagtgaatatccatgtgaaacatccccctgaa
gcctcagttcagatccatcaagtgtcaaggattgacagcacatcaacaggacaaaaagcg
aaagtacctcagccagtacatccacaggtctcttaccaaggtcttccgtatcagaaggcc
cagaaaggacatacaacttacacaaatcaacaacccattcctcatatgtttcctgtttca
gttaaaactcagcttgggcgctgctttcaggagactgttgggacacagtgtggcaaagca
cttcctggcctttccaagcaagaagactgctgtggaaccgtgggtacttcctggggtttt
aataaatgccagaaatgtcccaagaagccatcttaccatggatacggtcctatgatggaa
tgcccacaaggctacaagagaatcaatgctacgttttgtcaagatatcaatgagtgtcag
ttacagggagtatgccctaatggtgagtgcttgaataccatgggcagctacagatgtacc
tgcaaaatgggatttgtgccagatcctaccctctcaagatgcatacctgataaccctgta
gttgctgaagagaaaggaccctgctaccggtttgttagtgcaggaaagcaatgcatgcat
cctctttctgttcagctcagcaagcagctttgctgttgcagtgttggcaaagcctggggc
ccacactgtgagaagtgtccactcccaggaacagctgcttttaaggaaatctgccctggt
ggaatgggttatacggtttctggccctcacagaaacaagctatatcatcaccctgcagtt
agagtacagccacctgccattggcaagaccccgattactcaacctgttcctaaaggtact
tctcctccacctctcccagcaaaggaagagccagtggaggcactgaccttctcacagaaa
agtgagactgagatggctgtacaagaagtggcaactgcagctcctgatcaggaattagct
tccattgatcaagaaaagcagccttatctagagcctgggcagcctcagctttctcctgga
atttcaacaattaacctgcatccacagtttccagtagtgattgagaaaacatcccctcct
ttgcctgttgaagttgctcccgaagtctctacttcaagtgcaagtcaagttattgcacct
actcaagttacagaaatcaacgaatgtacagttaatcctgatatctgtggagcaggacac
tgtgttaatttgcctgtgggatacacctgcatctgctacaaggggtacagacttaatgat
cagcagacaaagtgcattgatattaatgagtgtaatcaggcaccacatctctgttccctt
ggacgctgtgaaaatacagaaggaagtttcctttgtatttgccaagctgggttcatggcc
agtgaagatggaactgactgcgttgattttgatgaatgttcaagacctcacacttgtgga
gaaggcttttgtataaacactcttggctcatacagatgtgaatattgtgatagtggatac
caaatgaacaggagaggtgaatgtgaagacattgatgaatgcctgactccaactacctgt
ccagatgcacagtgccttaatgctcctggctcttaccagtgcattccttgcagagtgggg
ttcagaggctggaacggacagtgccatgatataaatgaatgtcagtatggcaatcactgt
acaaatggacgctgtgaaaataccgagggatccttcaggtgtatttgtgcccagggtttc
aaactctctgcatccaaggagcagtgtgaagatattaacgaatgccagcagcgatcggtc
tgttcgaatggacgctgcaggaacacagaaggatctttcagatgtatctgtagccagggc
tactccttatcatctactggagatcagtgtgaagatgttgatgaatgccttcaagacagc
aatgtttgcctaagaggaagctgcataaatactgaagggtcttacaaatgtacttgtccg
gatggtttccagcagatagcgaataggggatgtcaagatatcaatgaatgtgagagatct
gacctctgttcaccacacggggagtgtctgaacacggatggttcctaccagtgcatatgt
gagcggggcttttctgtgtctgcagatggccgaacatgcgaagatgtggatgaatgtacg
aacggcacggtgtgcggcagtcacgggttctgtgaaaacatggatggctcctaccgctgt
ctctgttaccaagggtaccaggacacacaggatgggcaagggtgcaccgatgtgaatgaa
tgtgaaatgttgagcggagtttgtggcgaagccctctgcgaaaatgttgatggttctttc
ctgtgtctgtgctctgatgaaaaccaggagtatgatccaatgactggacagtgccgcttc
cgtagctcaccagaaatgccaagagaggctgatcaacaggaagatggaaagaaggagtgc
tactacaatctgaatgatgctaatttctgtgacaacgtgcttacatccaatgtaaccaaa
caagaatgctgctgtaccttgggtgctggttggggtgataactgtgaaatcttcccatgc
cctgttgttggaactgctgaatttactgatttgtgtcctgaaggaaaaggtttcattccc
tctggagaatcatcttacgggcttcttgctcagaattacaaagatgctgatgaatgccaa
ctctttggacaagaaatctgtaaaaatggcttctgtttgaatacacagccaggttatgag
tgctactgcaaacaaggcacatactatgaccctgttaagctccagtgctttgacacggat
gaatgtcaggacccaaacagctgtattgatggccagtgcattaacacagaaggatcttac
aactgtttctgtacacacccaatggttttggacgcaacagaaaagcgatgcatcagacca
gcagattcgagtgagcaaactgaagaagctgaggtctaccaggacctctgctggcagcac
ctgagtgacgattttgtctgtagtcgaccactggttgggaagcagaccacgtacacggag
tgctgctgcctgtacggggaagcctggggcatgcagtgcgcgctgtgtccaatgaaggag
tcagaggattacgcccagctgtgcaacattcctgttccaggatctcgacggccatatgga
caggatgctttagttgactttgaggagcactacactccagaaaccaatccatacttcgtt
gaagaccgtttcctgaacagctttgaggagctacaagcagaggaatgtggtattctgaac
ggatgtgaaaatggcagatgtgtaagggtccaggaaggctacacctgtgattgctttgat
ggttatcacctggatatggccaaaatgacttgtgttgatgtgaatgagtgcaacgagctg
aacaacaggatgtccctctgcaagaacgccaaatgcattaacacagaagggtcgtacaag
tgtttgtgtctccctgggtacgtgccttcagacaagccaaactactgcacaccactgaac
tcagaaccagagagcgaactggagtag
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