Hirundo rustica (Barn swallow): 120750956
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Entry
120750956 CDS
T09369
Symbol
TNFAIP3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3 isoform X1
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04217
Necroptosis
hrt04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120750956 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120750956 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120750956 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120750956 (TNFAIP3)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120750956 (TNFAIP3)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C64
120750956 (TNFAIP3)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
120750956 (TNFAIP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
120750956
NCBI-ProteinID:
XP_039916075
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All DBs
Position
3:51552340..51569162
Genome browser
AA seq
810 aa
AA seq
DB search
MMSSRNMAGQHILPQALYQSNMLKAMKIRERTPEDLVKPPSGVIHHFRTMHKYTIEMFRM
CQFCPQFRETLQKSLTDQATQTSLERQRKLNWCREVRRLVPLKTNGDGNCLMHAASQYMW
GIEDIDLVLRKTLFSALRETDTRNFKLRWQREAVKSQEFVETGLHYDTRNWEEEWEYLIE
MTSPEISGARNRLPYNALEEIHIFILANILRRPVIVLADKVVRSLESGSSFAPLNVGGVY
LPLLWLAEECYRYPIVLGYDNMHFTPLVTLKDSGPEIRAVPLVTSEQGRFEDLNVHFLTD
AEEREKEQLLKDYLIVIEIPVQGWDHGTTHLINAAKLDEGNLPKEINLVEDYFQLVQHEY
KKWQENAEPARRETCSRNRQELSLSQLSLLQMKCETPNCPFYMSVNTQPYCHECFEQRSQ
GNKGRKQTSKAASEKLKAPGSGTSRGDICEAGGWTSEGPVTEPRSAPPTAPSLFLYSETT
AMKCRTPDCPFTLNVQHNGLCERCYNSRQLSPCNNLDDQRHLDYATCKICRQKAKRTFNG
ICSTCFKRSTEQSPNGSPAFLPTCHQRSTSDPSQISQILHQHSCQQASNSHHKEPPPPAL
PPEENRGGSLCRKPGCKFFGTPQNEGFCTLCFFEYRENHDSVLLRHQRRSQRKSSAADQT
GNSAAGFHNTVSCQRRDCGTLGSTMLEGYCQNCFIIAQNQRFQEARRTEEQLVRQPERTG
QHRDVQRAALSSQRRQCAVASCRNNLACRSDDLCPECRRLGQLPPSRSAREPVAQEPPKQ
RCRAPACDHYGNAKCNGYCNECYQFKQIYG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccagaaatatggctggccaacacatccttcctcaagctttgtatcagagc
aatatgctgaaggctatgaagatcagagagaggacacctgaggatctagtcaaacctccc
agtggagtaattcatcacttcaggactatgcacaaatacaccatagaaatgttcagaatg
tgccaattttgtccccagtttcgggaaacgcttcaaaaatccctgactgaccaggccacc
cagacttcactggagcgccagaggaagctcaactggtgcagggaagttcggagacttgtt
cctttgaagactaatggcgatggaaattgtcttatgcatgctgcatcacagtacatgtgg
ggtattgaagatatcgaccttgtcttaagaaaaacattgtttagtgctctcagggagact
gacacacggaacttcaagctccgctggcagcgggaggctgttaaatcccaggagtttgta
gaaacaggactccattatgacacccggaactgggaggaggagtgggaatacctcattgaa
atgacttccccagaaatatctggggctcgaaacaggcttccctataatgcattggaagaa
atccacatcttcatccttgctaacatcctcagaaggccagtcattgtccttgcagataaa
gtggttagaagtttagagtcaggctccagttttgctcctctgaatgttggtggtgtttac
ttgcctctcctatggctggctgaggaatgctacagatacccaattgtgcttggctatgac
aacatgcattttacaccactggtgactctgaaggacagcgggccagaaatccgggctgtc
cctctggtcaccagtgaacaaggcagatttgaggatttgaatgtgcactttctgacagat
gcagaagagagggagaaagaacagctgctaaaagactacttgatagtgatagaaattcca
gtgcaaggctgggatcatggtacaactcatctaattaatgctgcaaagttagatgaaggc
aacctaccaaaagaaataaacctcgtggaagattactttcaactggtacagcatgagtac
aagaagtggcaggagaatgctgaacctgctagaagagagacatgttccaggaacagacag
gaactatcgctttcccagctctccctcttacagatgaaatgtgaaacgccaaattgccct
ttctacatgtctgtgaacacccagccctactgccacgaatgctttgagcagaggtcccag
ggaaacaaaggaagaaagcagacctccaaagcagcatctgagaagctgaaggcacccggg
tcaggcacctcccgtggagatatttgtgaagctgggggatggacatctgaagggcctgta
acagagcctcgctctgcacctccaactgctccaagccttttcctgtacagtgaaaccaca
gccatgaagtgcaggaccccagactgtcccttcacgttgaacgtgcaacacaatgggctg
tgcgaacgctgctacaactccagacagctcagtccctgcaacaacttggatgaccagaga
cacttagactatgccacatgcaaaatatgccgtcaaaaggccaagaggaccttcaatggt
atatgcagcacttgcttcaaaaggtccacagagcagtccccaaatggcagtcccgctttc
ctgcccacgtgccaccagagatcgacatctgacccatcccagatctcacagatcctccac
cagcactcctgccagcaggcttctaacagccatcacaaggagcccccaccaccagcgctg
cctcccgaggagaacaggggaggcagcctctgtaggaaacctggttgcaagttttttggg
acaccacaaaatgagggcttttgcacgctgtgtttctttgagtacagggaaaaccatgac
agtgttttgctgcgccaccagaggagatctcagaggaagtcttcagcagcagatcagacg
gggaactccgctgctggcttccataacactgtgtcctgccagcggcgcgactgcggcacc
ctgggcagcacgatgctcgaggggtactgccagaactgcttcattatagcccagaaccag
cgattccaagaagccaggaggacggaagaacagctagtgagacagccagaaagaacaggg
cagcacagagatgtgcagcgagcagcactgagttcccagaggagacagtgtgctgtggct
tcgtgtagaaacaacctggcctgcagaagcgatgacctgtgcccggagtgccggcgcctt
ggtcagctgccaccgtcacggagtgccagggagccggtggcacaggagcctcccaagcaa
cgctgccgagcccctgcctgtgatcactatggcaatgccaagtgcaacggctactgcaat
gaatgctaccagttcaaacagatctatggctag
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