Hirundo rustica (Barn swallow): 120751485
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Entry
120751485 CDS
T09369
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120751485 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120751485 (IRF5)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120751485 (IRF5)
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Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120751485
NCBI-ProteinID:
XP_039917353
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All DBs
Position
4:232979..237626
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AA seq
486 aa
AA seq
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MDPPRRVRLKPWLVAQVSSRRFPGLHWLDPERRRFVIPWGHATRNPPGPQDHDTIFKAWA
QETGRYRAGDPPDPPRWKATLRCALNKSREFRLLLDGPRASPARPFRVYELCEEPPGAAD
GGDEDDYGCSGEEDVSQLHKMTSLSIDDTQHGGDALPPYSWPKEEPPPFASCCPPGPFGP
LALLQGEAGGSAHGTPELLPGALAETGPPLDPPGPSSSCPVAPTEHLVPDLLVSPHMLPL
TDLELKFQYRGRQVCALTVSNPHGCRLFHSSLEPTREQEELFGPLTLEQVPFPAPDAIPN
EKQRFYTHQLLDVLDRGLILELQGQDLFALRLCQCKVFWTGPCAAPRPGPNPIQRERRTK
LFSLEGFLNGLIQFQKGQTPTPPPFEIFLCFGEEWPDQKPKEKKLITVQVVPVAARLLLE
MFSGELSWSADSIPLQISHPDLKDRMVEQFKELHQLWQSHQRLPPAQPLPGPSAGPWALP
PGPLRP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccccggcgggtgcgcctcaagccctggctggtggcccaggtcagcagccgg
cgcttcccggggctccactggctcgaccccgagcgccgccgcttcgtcatcccctgggga
cacgccaccagaaaccccccggggccgcaggaccacgacaccatcttcaaggcgtgggcg
caggagacgggccggtaccgggccggggaccctccggaccccccgcgctggaaagccacc
ctgcgctgcgccctcaacaagagccgcgagttccggctgctgctggacgggccccgcgca
tccccggcccggcccttccgcgtgtacgagctctgcgaggagccccccggggctgcagac
ggcggggacgaggatgactatggctgcagcggggaggaagacgtcagccagctccataag
atgacatccctgagcatcgatgacacgcagcacgggggggacgcgctgcccccctactcc
tggcccaaggaggagccccccccctttgccagctgctgccccccggggccctttgggcct
ctggcactgctccagggggaggcggggggcagcgcccacgggaccccggagctgctcccc
ggagccctcgctgagacggggccccccctggaccccccggggccctcgtccagctgcccg
gtggcaccgacagagcacctggtcccggacctgctcgtcagcccccacatgctgccactg
actgacctggagctgaagttccagtaccggggccgccaggtctgtgccctgactgtcagc
aacccccacggctgccggctgttccacagcagcctggagcccacgcgggagcaggaggag
ctcttcgggcccctgacgctggagcaggtgcccttccctgctcccgacgccattcccaac
gagaagcagcgcttctacacccaccagctgctggacgtgctggaccgagggctcatcctg
gagctccagggccaggatctctttgccctccggctgtgccagtgcaaggtcttctggacg
gggccctgcgccgctccccggcctggccccaaccccatccagagggagaggaggaccaag
ctcttcagcctcgagggcttcctcaatggcctcatccagttccagaaggggcagaccccc
acgccgcccccctttgagatcttcctgtgcttcggcgaggagtggccggaccagaagccc
aaggagaagaagctgatcacggtgcaggtggtgccggtggcggcgcggctgctgctggag
atgttctccggggagctgtcctggtcggccgacagcatcccgctgcagatctcgcacccc
gacctcaaggacaggatggtggagcagttcaaggagctgcaccagctctggcagagccac
cagcggctgccgccggcgcagcccctgcccggcccctccgcagggccctgggcgctgccg
cccgggcccctgcgcccctga
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