Hirundo rustica (Barn swallow): 120752174
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Entry
120752174 CDS
T09369
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03420
Nucleotide excision repair
hrt04110
Cell cycle
hrt04114
Oocyte meiosis
hrt04120
Ubiquitin mediated proteolysis
hrt04141
Protein processing in endoplasmic reticulum
hrt04310
Wnt signaling pathway
hrt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120752174 (RBX1)
04120 Ubiquitin mediated proteolysis
120752174 (RBX1)
09124 Replication and repair
03420 Nucleotide excision repair
120752174 (RBX1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120752174 (RBX1)
04350 TGF-beta signaling pathway
120752174 (RBX1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120752174 (RBX1)
04114 Oocyte meiosis
120752174 (RBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120752174 (RBX1)
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120752174 (RBX1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
120752174 (RBX1)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120752174 (RBX1)
Multi subunit type E3
SCF complex
Ring finger protein
120752174 (RBX1)
Cul2 complex
120752174 (RBX1)
Cul3 complex
120752174 (RBX1)
Cul4 complex
120752174 (RBX1)
Cul7 complex
120752174 (RBX1)
Cul8 complex
120752174 (RBX1)
Cul9 complex
120752174 (RBX1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120752174 (RBX1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
120752174 (RBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120752174
NCBI-ProteinID:
XP_039918795
LinkDB
All DBs
Position
4:complement(52047948..52058800)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGANSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaatggatgtggacacccccagcggagccaacagcggcgccggcaagaag
cgcttcgaagtgaagaaatggaatgccgtagctctgtgggcatgggacattgtggttgat
aactgtgccatttgcagaaaccacattatggatctatgcatagaatgtcaagccaaccaa
gcatcagctacctctgaggagtgcacagttgcatggggcgtctgcaatcacgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgtccactggacaacagggaa
tgggagttccaaaagtatggacactag
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