KEGG   Hirundo rustica (Barn swallow): 120752174
Entry
120752174         CDS       T09369                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt03420  Nucleotide excision repair
hrt04110  Cell cycle
hrt04114  Oocyte meiosis
hrt04120  Ubiquitin mediated proteolysis
hrt04141  Protein processing in endoplasmic reticulum
hrt04310  Wnt signaling pathway
hrt04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120752174 (RBX1)
   04120 Ubiquitin mediated proteolysis
    120752174 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120752174 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120752174 (RBX1)
   04350 TGF-beta signaling pathway
    120752174 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120752174 (RBX1)
   04114 Oocyte meiosis
    120752174 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hrt04121]
    120752174 (RBX1)
   03400 DNA repair and recombination proteins [BR:hrt03400]
    120752174 (RBX1)
Enzymes [BR:hrt01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     120752174 (RBX1)
Ubiquitin system [BR:hrt04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   120752174 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     120752174 (RBX1)
   Cul2 complex
     120752174 (RBX1)
   Cul3 complex
     120752174 (RBX1)
   Cul4 complex
     120752174 (RBX1)
   Cul7 complex
     120752174 (RBX1)
   Cul8 complex
     120752174 (RBX1)
   Cul9 complex
     120752174 (RBX1)
DNA repair and recombination proteins [BR:hrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120752174 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120752174 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 120752174
NCBI-ProteinID: XP_039918795
LinkDB
Position
4:complement(52047948..52058800)
AA seq 108 aa
MAAAMDVDTPSGANSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcaatggatgtggacacccccagcggagccaacagcggcgccggcaagaag
cgcttcgaagtgaagaaatggaatgccgtagctctgtgggcatgggacattgtggttgat
aactgtgccatttgcagaaaccacattatggatctatgcatagaatgtcaagccaaccaa
gcatcagctacctctgaggagtgcacagttgcatggggcgtctgcaatcacgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgtccactggacaacagggaa
tgggagttccaaaagtatggacactag

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