Hirundo rustica (Barn swallow): 120752385
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Entry
120752385 CDS
T09369
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04260
Cardiac muscle contraction
hrt04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120752385 (CACNA2D1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120752385 (CACNA2D1)
04261 Adrenergic signaling in cardiomyocytes
120752385 (CACNA2D1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120752385 (CACNA2D1)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120752385 (CACNA2D1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_1
DUF3983
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
120752385
NCBI-ProteinID:
XP_039919279
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Position
4:9392648..9761145
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AA seq
1101 aa
AA seq
DB search
MAAVWLLVFSLTLFQSLVMNHSSEGPFPSATTIKAWVDKMQEDLVTLARTASGVDRLADI
YLKNTDLYTVQANNPRQLVEIAARDIEKLLSNRSKALVRLAKEAEKYQASHQWRDEFGNN
DIIYYNAKDDQNDPEKNETESGSQRIRPVFEDDPVFRRQTSYQHAAVHIPTDIYEGSTIV
LNELNWTAALDDVFKRNREEDPTLLWQVFGSATGLARYYPASPWVDKSRTPNKIDLYDVR
RRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVIEMLETLSDDDFVNVVSFNNNAQ
NVSCFNHLVQANVRNKKKLKEAVYKISAKGITDYKKGFSYAFEQLLNHSVSRANCNKIIM
LFTDGGEERAQEIFHKYNEDKKVRVFTFSVGQHNYDKGPIQWMACENKGYYYEIPSIGAI
RINTQEYLDVLGRPMVLAGEQAKQVQWTNVYLDALELGLVITGTLPVFNLTREQNGKINQ
LILGVMGVDVSLEDIKKLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKQIGVGIPKVKLR
KRRPNVQNPKSQEPVTLDFLDAELENDIKVEIRKKMIDGESGEKTFETLVKSQDERYIDK
GNRTYTWTAVNGTDYSLALVLPSYSFYYIKAKIDEPITQARFSETLKLDHFDEAGYTFLA
PREYCTDVKKSENNTEFLLNFTEFIDRNTPSSSSCNTDMVIRVLLDAGFTNELAQKYWSK
LSLDGVVAQFVVTDGGITRVFPKRAGEDWLENAETYEVSFYKRSLDNDNYIFTAPYYNKS
GANSYESGIMVSKAVEIQVDGKLLKPAVVGIKIDATSWMKNFTKTTIKSLCNSEICGCER
NSMHVDCVILDDGGFLLMSNRDEYTQQIGRFFGEIDPGLMRNLINMSLYAFNKSYDYQSV
CDPEEEPKQGAGLRSAYVPTITDILQLGWWASAAAWSILQQLFLSLTFPRFLEAADMEDD
DFGAALPKTSCITEQTQYFFENNDKSFGGIVDCINCSRLYHAEKISNTNLVFIISDSQLL
CRSCDPKPLMQAEKPDEGPNPCEMVKQPRYRKGPEICFDEAKQEDSADCGGASGLSPSLW
SMVAIQLVLLWLLSGSRHCQL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtctggctgctggtctttagcctgacacttttccagtcgttggtgatgaac
cactcctcggagggacccttcccctcggccaccacgataaaagcatgggtggataagatg
caagaagatctcgtgacgctcgcacgaactgcaagtggagtggaccggcttgctgatatt
tatttgaaaaacacagacttgtacacggtacaagcaaacaaccctcggcagctagtggaa
attgcagccagagacattgaaaaacttttaagtaacaggtctaaagctctggtgcgcctt
gctaaagaagcagagaagtaccaagcatcgcatcagtggagggatgagtttgggaataat
gatataatctattacaatgcaaaagacgatcagaatgatcctgaaaagaatgaaactgaa
tctggcagccagagaatcagaccagtatttgaagacgatcctgttttccgacggcaaaca
tcttaccaacatgcagcagtccacataccaacagatatttatgaaggctcaacgatcgtg
ttaaatgagctcaactggactgcagcgctggatgatgtgttcaagcggaacagggaagag
gaccccactttattatggcaggtttttggtagtgccactggactcgcaaggtattaccca
gcttccccatgggtagataaaagtcgaactcctaacaaaatagatctgtatgatgtacgc
agaagaccatggtatatccaaggggctgcatcgcccaaagatatgcttattttagtggat
gcgagtgggagtgtcagtgggttgacattgaagctgatccgcacatcggtcattgagatg
ttggagacgttgtctgatgatgactttgtgaatgtagtttcatttaataataatgctcag
aatgtaagttgctttaatcatcttgtccaagctaatgtgaggaacaagaagaaactgaaa
gaagctgtctataaaatctctgctaaaggaatcacggattacaaaaaaggctttagctac
gcttttgaacagctgctaaatcacagtgtctccagagctaactgcaataagattattatg
ctgtttacagatggtggtgaagaaagagcacaagaaattttccacaaatataatgaagac
aaaaaagtacgagtgttcacattttctgttggccaacataattatgacaaaggacccata
cagtggatggcctgtgaaaataaaggttattattatgaaatcccatctattggagccata
agaataaacacccaggaatatctagatgttttgggaagaccaatggttttagctggagag
caagccaaacaagtccaatggacaaatgtctatctggatgctctggagctgggccttgtg
attacaggaactctacctgtcttcaatctaacaagggaacaaaatgggaaaatcaatcag
ctgattcttggagtaatgggggtcgatgtctctttggaggacataaaaaaactgacgccc
cgatttacgctttgtccaaatggatactattttgcaattgatcctaatgggtatgtgcta
ctgcatccaaatctccaaccaaagcaaattggtgtgggcataccaaaagttaaattaaga
aaaaggagacccaatgtacagaatcctaaatcccaggaacctgttacgctggattttcta
gatgctgaattggaaaatgatattaaagttgagattcggaaaaaaatgatagatggagaa
agtggagaaaaaacatttgaaacattggtcaagtcccaagatgagaggtatatcgataaa
ggaaacagaacgtatacatggactgctgtgaatggcacggattacagtttggcactggtg
ttaccgtcatacagcttttattatattaaagccaaaatagatgaaccaataactcaagcc
agattttcagaaacactgaagcttgatcattttgatgaagctggctatacgtttttagca
ccaagagaatactgtaccgatgtaaaaaaatcagaaaacaacactgaatttctattaaat
ttcactgaatttattgacagaaatactccaagcagttcatcatgtaatactgatatggtc
attagagttctgctggatgcaggatttacaaatgaacttgcccaaaaatattggagtaaa
ctgtctctcgatggagttgttgcacagtttgttgttacagatggtggaatcactagggtg
tttcccaaaagggcaggagaagattggttggaaaatgctgaaacttatgaagtcagcttc
tataagaggagtttagataatgacaactatattttcacagctccatactacaacaaaagt
ggtgccaatagctatgaatcaggtattatggtaagcaaggctgtggaaatacaagttgat
gggaagcttctgaagccagcagttgttggaataaaaattgatgcaaccagctggatgaaa
aatttcacaaaaaccacaatcaagagcctgtgcaacagtgaaatctgtggctgtgaaaga
aatagtatgcatgtggactgtgttatcctcgatgatggtggatttcttttgatgtccaat
cgagatgaatatacacaacagattggaagattctttggtgaaattgatcctggcctgatg
cgaaacctgattaacatgtccctgtatgcctttaataagtcttatgactatcagtcagtc
tgtgatcccgaagaagaaccaaagcaaggagctggtcttcgttctgcttatgtgcctacg
ataacagatattttgcaacttggatggtgggcttcagcagcagcctggtctatcttacag
cagctgtttttgagcttgacttttccacggttccttgaagcagctgatatggaagatgat
gattttggtgctgccctgcctaaaacaagctgtatcactgagcaaactcaatatttcttt
gaaaacaatgataaatcctttggtgggattgtagactgtataaactgctccagactttat
catgcagagaagatttcaaacaccaatctagtgttcattattagtgacagccagctgctg
tgccgttcctgtgacccaaagccactgatgcaagcagagaagccggatgaaggtccaaat
ccatgtgaaatggttaagcaacctagatacagaaagggtcctgaaatctgttttgatgaa
gccaaacaggaagattcggctgactgcggtggggcctctggtctgagtccatcactgtgg
tctatggtagcaattcagttggtcctgctttggctgttatctggcagcagacactgccag
ttatga
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