Hirundo rustica (Barn swallow): 120753830
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Entry
120753830 CDS
T09369
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04620
Toll-like receptor signaling pathway
hrt04621
NOD-like receptor signaling pathway
hrt04622
RIG-I-like receptor signaling pathway
hrt05164
Influenza A
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120753830 (TRAF3)
04621 NOD-like receptor signaling pathway
120753830 (TRAF3)
04622 RIG-I-like receptor signaling pathway
120753830 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120753830 (TRAF3)
05168 Herpes simplex virus 1 infection
120753830 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
zf-C3HC4_2
ATG16
Spc29
FliJ
CEP104_ZnF
Sina_ZnF
zf-RING_UBOX
KxDL
GAS
SPATA24
DUF1664
zf-RING_6
Crescentin
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
120753830
NCBI-ProteinID:
XP_039922472
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All DBs
Position
6:complement(10487904..10557867)
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AA seq
567 aa
AA seq
DB search
MDTSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLRSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNES
KGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKSAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagtcagaaccccctttatctgtagaaatggtacagcagagggcc
aatcctgaccgcagtccatcagcatccatctatgttccagagcaaggtggctacaaggag
aaatttgtgaatgctgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgaaacctgcatgaatgccttgctg
aggtcttctagtccaaaatgtacagcatgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaagc
aagggctgtaaggaacagctgtctttgggtcaattactgatgcatctgagaactgattgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaggat
ttgccagaccatgtagagaagacctgtaaataccgagagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttacagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacacttatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactcaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtggaatccctccagaacagagtg
actgagctggaaagtgttgataaaagtgccgggcaaggagctcggaatacaagcctgctg
gagacccagctgagcaggcacgatcagatgctgagcgttcatgacattcggctggctgac
atggacctccgcttccaggttctggaaactgcaagctacaacggagtgttgatttggaaa
atccgagattataaacgtcggaagcaagaagcagtcatggggaagactctgtccttgtac
agccaacccttttataccggctactttggctacaagatgtgtgccagagtttacctgaac
ggagatggcatgggaaaggggacgcacttgtctctgttttttgtcataatgcgtggagaa
tacgatgctttgcttccttggcccttcaaacagaaagtgactctcatgctcatggatcag
ggaccgtctcgacgccacttgggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcgtctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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