Hirundo rustica (Barn swallow): 120754094
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Entry
120754094 CDS
T09369
Symbol
BDNF
Name
(RefSeq) brain-derived neurotrophic factor
KO
K04355
brain-derived neurotrophic factor
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120754094 (BDNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hrt04052
]
120754094 (BDNF)
Cytokines and neuropeptides [BR:
hrt04052
]
Cytokines
Growth factors (RTK binding)
120754094 (BDNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
120754094
NCBI-ProteinID:
XP_039923208
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All DBs
Position
6:complement(53886627..53925265)
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AA seq
246 aa
AA seq
DB search
MTILFFTMVISYFTCMKAAPMKEASLRGQGSLAYPGLRTHGTLESINGPNAGSRGLTSLA
DTFEHVIEELLDEDQDIQPSEGNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAAN
MSMRVRRHSDPARRGELSVCDSTSEWVTAAEKKTAVDMSGATVTVLEKVPVPKGQLKQYF
YETKCNPKGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDNKKRVGWRFIRIDTSCVCTL
TIKRGR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccttttctttactatggttatctcatacttcacttgcatgaaagctgcccca
atgaaagaagcgagtctaagaggacaaggcagcttggcttacccaggtcttcggacccac
gggactcttgagagcataaatgggcccaatgctggttcaagaggactgacatcgttggca
gatacttttgaacatgtcatagaggagcttctagatgaggaccaggacatccagcccagt
gagggaaataaggatgcagacttgtatacatcccgagtcatgctaagcagtcaagtgcct
ttggaacccccgctgctctttctgctcgaggagtacaaaaactacttagatgctgcaaac
atgtccatgagagtccggcgccactctgatccagctcgccgtggggaactgagtgtatgt
gacagcacgagtgagtgggtgacagcagcagagaagaagactgcagtggacatgtccggg
gcaactgtcacagtcctggaaaaagttccagtacccaaaggccagctgaagcaatacttc
tatgagaccaaatgcaaccctaagggatacacaaaggagggctgcaggggcatagacaaa
aggcactggaactctcagtgccgaactacccagtcttacgtgagagctctcaccatggat
aataaaaagagagttggctggcgctttataaggatagacacttcttgtgtatgtacatta
accattaaaaggggaagatag
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