Hirundo rustica (Barn swallow): 120755249
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Entry
120755249 CDS
T09369
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120755249 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120755249 (GLI2)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120755249 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
120755249
NCBI-ProteinID:
XP_039925941
LinkDB
All DBs
Position
7:complement(11618971..11807892)
Genome browser
AA seq
1528 aa
AA seq
DB search
METSASTAVGKKEGKGAVLEGNGFTETGKKPTPLAAAGAAVAQGVPQHIFPAFHAPLPID
MRHQEGRYHYEPHSLHAIHGPPPLSGSPVISDISLIRLSPHPAGPGESPFSPPHPYVAPH
MEHYLRSVHSSPTLSVISAARGLSPADVAHEHLKERGLFGLPPPPPGANPADYYHQMTLM
AGHPNPYGDLLMQGGGAASTAHLHDYLSPVDVSRFSSPRVTPRLSRKRALSISPLSDASI
DLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGTISPAFSFPHPLNPVTYQQILTQQ
RGLSSAFGHTPPLIQPSPTFPPRQHMAVISVNPSPAQSSSNSNCISDSSQSKQSSESAVS
STVNPVINKRSKVKTEVEGLPPVSPNTQEHLTDLKEDLDKDECKQEPEVIYETNCHWEGC
TKEYDTQEQLVHHINNDHIHGEKKEFVCRWQDCTREQKPFKAQYMLVVHMRRHTGEKPHK
CTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPY
VCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHPRPPPLKENGDNEASAKQSS
KVSEETPEANSTTRSMEDCLQVKTIKTENSVMCQSSPGGQSSCSSEPSPLGSTNNNDSGV
EMNMHSGGSLGDLTALDDNAPVVDSTVSSGNSAVSLQLRKHMTTMQRLEQLKKEKLKTVK
DSCSWVSPAPQARNTKLPPISGNGSVLENSGGSSAMLPNPRIMELSVNEVTMLNQLNERR
DSTTSTVSSAYTVSRRSSGISPYFSSRRSSEASHLGHRPNNTSSADSYDPISTDASRRSS
EASQCSGMPGLLNLTPAQHYRLKAKYAAATGGPPPTPLPNMERMTLKNRISLMDGPDPTL
PSIRLPPGPRRCSDGNSYGYPSAPAFPHEVQGNCTRRASDPVRRPPGDPQAFPRVHRFNS
TNSMNPFHPPHATDRRNFGLQSYGRSDGSLPRHTYSPRPLSISENITMEAMSGETDAPIG
DDDIMLPDDVVQYIKSQSNGTVAESTSMGYSSEMQNFQGSGKLQPPALPGQRRMAVAEPS
MSHLGPMMAECSMSFDTSSDINKNNMPVQWNEVSSGTVDIMSNQSKQQFSQGNLAVVQQK
QNFGQYQNYNQQQIQLPDNSMNATQQSFMQRNVGMDGQRLNCMQLRQQPMSLGPSMNPDM
GLHTGYNQPHQMLSPSAISGNPNQISPNCSNMAAKSGPHVHPQQMDMATDPSLMVRSNSE
RTVLGQVMHEPSQQNYSSQPSHLNFPVAQETFPQPIMTSSQPSFEPQQGVMGSAAQAYPP
GMIQPRPPPEPNPGSRPRGVRTAQQLGYMRTPHPTSTISPGQETTEAMHKRTSDMLLAPA
QQCADGTRDSSLMYYYGQIHMYEQNNGFDNHADCRVRQQQCTQNSKPATLPSPGTNQVSS
TVDSQGLEPPQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSSRLTTPRNSLTLPTIPA
GISNMAIGDMSSMLTTLAEESKFLNMMS
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctgcttcaacagctgttgggaaaaaagaagggaaaggtgctgttctggag
gggaatggctttacagagacggggaagaaacccactcctttagcagcagcaggagcagca
gtggcacaaggagtgccacagcacatttttccggccttccacgctcctttgccaattgac
atgcgccaccaggaaggacgataccattacgaacctcactctctccacgctatccacggg
cctcctcctctgagcggcagccccgtcatctccgacatctccctcatccgcctgtctccg
caccctgccgggcccggcgagtcgcccttcagcccaccacacccctacgtggcaccccac
atggagcactacctgcgctctgtgcacagcagccccacgctctccgtcatctctgctgcc
aggggcctcagtcctgccgacgtggcccatgagcacctgaaggaacgaggcctctttggg
ctgcccccaccaccgccgggagccaaccctgctgactactaccaccaaatgacgctgatg
gccggccacccaaacccctatggggacctcctcatgcagggcgggggagcagccagcaca
gcccacctccatgattacctcagccctgttgatgtgtcccggttttcgagcccgcgggtg
actccaagattaagccggaaacgagccctgtctatctctccgctctcggatgccagcatt
gatctccagacaatgatcaggacctccccaaactctcttgtggcatatatcaacaactcc
agaagcagttcagcagcgagtggctcctacggccatttatctgccgggacaatcagtcca
gcattcagcttcccccacccgcttaaccccgtgacataccagcagatcctgacccagcaa
agaggcctgagctcagcctttggacacactcctcccctgatccagccatctccaaccttc
cccccacggcagcacatggcagtcatctctgtgaacccatcaccagcccagagcagcagt
aacagcaactgcatctctgactctagccagagcaagcagagcagtgagtcagccgtcagc
agcaccgtcaatccagtgattaacaaacgaagcaaagtcaagactgaagttgagggcttg
cccccagtgtccccaaacacacaggagcatctgacagacctgaaagaagatcttgataag
gatgaatgtaaacaggagcctgaggttatttatgagactaactgtcactgggaagggtgc
acaaaggaatatgacactcaggagcagctcgtccatcacatcaacaacgatcacatccac
ggggagaagaaggagtttgtctgccgctggcaggactgcacacgggagcagaagcccttc
aaggctcagtatatgctggtggtgcacatgcgaaggcacacgggagagaagccacacaag
tgcacgtttgagggttgttccaaagcctattcccgcctggagaacttaaagacacacctg
aggtcccacactggagaaaaaccttatgtctgtgaacacgaaggctgcaataaagccttt
tccaatgcctcggacagagccaagcaccagaacaggacacattccaatgagaagccgtac
gtctgtaaaatccctggctgcacgaagcggtacacggaccccagttccctcagaaaacac
gtcaagacggtgcacgggcctgacgctcacgtcacgaagaagcagcgcaatgacgttcac
ccgaggccacctccactcaaggaaaatggggacaatgaggcaagtgccaagcagagcagc
aaggtgtcagaggagacccccgaggccaacagcaccacgaggagcatggaggattgctta
caagtcaaaacaataaaaacagagaattctgtgatgtgtcagtccagtcctggtggccag
tcgtcatgcagcagtgagccatcaccccttggcagcaccaacaacaatgacagtggagta
gaaatgaacatgcacagcgggggaagtctgggagatctgacggcgttggatgacaacgct
cctgtcgtggactcaacggtctcatctggtaactcggcagtcagcctgcagctaaggaaa
cacatgacgacgatgcaacgacttgaacaactcaagaaggagaaactcaagacagttaag
gattcctgctcatgggtgagcccagctccacaagccagaaacaccaagctgcctcccatc
tcaggaaatggctccgttctagaaaatagtggtggttcttctgctatgctgcctaacccc
agaataatggagctgtctgtcaacgaggttacaatgctgaaccaactcaacgagcgccgt
gatagtacaacaagcaccgtcagctctgcctacactgtcagccgcagatcctcagggatc
tccccgtacttctccagccgccgttccagcgaggcttcgcatctcgggcaccgccccaat
aacacaagctctgctgactcctatgacccgatttccacggatgcttcccgccggtcgagc
gaggcgagccagtgcagcgggatgccgggtctgctgaacctcacaccagctcagcactat
aggctgaaagccaagtacgctgctgccacgggcggccctcctccgactcccctgccaaac
atggagaggatgaccctgaagaacaggatctcacttatggatggaccagaccctaccttg
ccctccatccgcctcccgccaggccccaggcgttgcagcgatggtaacagctatggctac
ccatcagctccagcatttccccatgaggtgcagggcaactgcacaagacgggcaagcgac
ccagtgaggagacctcctggagatccccaggctttcccacgagttcaccgcttcaacagc
accaacagcatgaaccccttccatcctccacacgccacagacaggaggaattttggtctc
cagagctacgggcgctcagatgggagcctgccccgacacacctactcaccccgaccactc
agcatcagtgaaaacatcaccatggaagccatgtctggggagacagacgcacccattgga
gatgatgacattatgctgccagatgatgtggtacagtacatcaaatcccagagcaatggg
acagtggccgagagcacttccatgggatacagcagtgagatgcagaacttccaaggaagt
gggaagctgcagcctccagccttgcccggccagcgcaggatggcggtggctgagccaagc
atgagccacttgggacccatgatggcagagtgttccatgagttttgatacttcttcagac
attaataaaaataatatgcctgtccagtggaatgaagtcagctcgggcacagttgatatc
atgtccaatcagtcgaagcagcagttttcacaagggaacttagcggtggtccagcagaag
cagaactttggtcagtaccagaactacaaccagcagcagatacagctgccagacaacagc
atgaatgcaacacagcagagctttatgcagagaaacgtgggtatggatgggcagaggcta
aactgcatgcagctgcggcagcagcccatgagcctaggtcccagcatgaaccccgatatg
ggtttgcacacagggtataaccaaccacatcagatgctgagtcccagtgcaatcagtggc
aacccaaatcagatctctcctaattgcagcaacatggcagcaaagtctggaccccacgtt
caccctcagcaaatggacatggcaaccgacccttctttgatggtcaggagcaacagcgag
cgcacagtcctgggacaggtcatgcacgagccaagtcagcagaactactcatctcagcca
agccacctgaacttccctgtggctcaggagacctttcctcagcccatcatgacctccagt
cagcccagttttgagcctcagcagggcgtgatgggttcagctgcacaggcgtatccgcct
ggcatgatccagcctcgtcctccaccagagccaaacccgggcagcagaccccgaggggtc
cgcactgcccagcagctgggctacatgagaactccccatcctacgagcaccatcagcccc
ggccaggagacgacagaggccatgcataaaagaaccagtgacatgttgctggcaccagcc
cagcagtgcgcggacggcacgagggacagcagcttgatgtactattacggccaaatccac
atgtatgaacagaacaacggctttgataaccacgcggactgtcgggtcaggcagcagcag
tgcacacaaaacagcaagccagccactctgccttccccaggaacaaaccaggtgtccagc
acagtggactctcaaggtcttgagccaccccagatagattttgatgccatcatggatgat
ggggaccattcaagcctgatgtcgggaaccctgagccccagcatcctgcagaacctctcc
cagaattcctctcgcctgacaactccacgaaactctctgactctgcccaccatacctgca
gggataagcaatatggcaataggtgatatgagctccatgctaaccacgctggcggaagag
agtaaatttctaaacatgatgtcgtaa
DBGET
integrated database retrieval system
