Hirundo rustica (Barn swallow): 120756843
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Entry
120756843 CDS
T09369
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120756843 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hrt04050
]
120756843 (TNFRSF11A)
04090 CD molecules [BR:
hrt04090
]
120756843 (TNFRSF11A)
Cytokine receptors [BR:
hrt04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120756843 (TNFRSF11A)
CD molecules [BR:
hrt04090
]
Proteins
120756843 (TNFRSF11A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
AI-2E_transport
CrgA
RELT
COX2_TM
TMEM154
Motif
Other DBs
NCBI-GeneID:
120756843
NCBI-ProteinID:
XP_039929516
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Position
1:84177066..84205508
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AA seq
664 aa
AA seq
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MPVPSGCWLLLLCLAAAGKQLSLQITPPCESEQHYEYSGRCCRKCEPGKYLSARCTATSD
SVCQPCGPNEYMDVWNEEDKCLLHKICDQGKALREVNPGNSTFQRQCACTMGYHWNEDCD
CCQRNTVCAPGLGVKPPVQQDRDTMCIPCPRGFFSKVSSSTDECKSWTNCTALGMEESVP
GTDKSDAVCKERKMPEPSEDGTNRILYVLIVILFFVTLIGIVVFIVYYKKKGKKLTADLQ
NWANEVCSQIKGTKEPPRDAFVTVNITNAAVPQTSEDTCLLVPSGSPVPGNSCCTSGHTP
CRNESPSTEPCEAGGFSAVTETDDYQFPPVPTEDEYMDKDLHNTDYLSLLSQTASKTVSS
LSEPVEAGENDSLNQYFSGIGSTEDVSVSQGFHPPSNTDGAHVATEQLLQKSCQHGHGCP
KETGNKDTDHFATNCDSEKICVRCGILYRESPQKCDKPCCAAADSTSTSPETASCAQCTC
GLNSLSAGQSTLANDLGMEDAPSDSTNMKYQSTNRSTSGTHRSTSGTHSSTSDLPPASGN
VTGNSNSTFISSGQVMNFKGDIIVVYLSQNSQEGATASGPSEENVGSPVQEENLSRCETF
AGNAQHYKEKCAELQGACPAPGSGGPRWPGGALARERGPSCGGQASQPVQEEGKLGHFSE
KVLN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcccgtcaggctgctggctccttctcctgtgcctcgctgccgctggcaaacag
ctgtcactacaaatcactccgccctgtgagagcgaacaacactatgagtactctggacgg
tgctgcaggaagtgtgagccagggaagtatttgtctgctagatgcactgctacttctgat
agcgtgtgccagccgtgtggcccaaacgagtatatggatgtctggaatgaagaagataaa
tgcttactacataaaatatgtgatcaagggaaggccttgagagaagtgaacccaggaaac
agcacgttccagcggcagtgtgcttgtacgatgggctaccactggaacgaggactgtgac
tgctgtcagcgaaataccgtgtgtgctcctgggctcggagtcaagcctcctgtgcaacaa
gacagggacacaatgtgcataccatgtcccagaggcttcttctcaaaggtctcttcatcc
accgacgagtgtaaatcctggaccaactgtacagctctaggaatggaagaaagtgtgcct
gggactgacaagtctgatgcagtttgtaaagaacggaagatgcctgagccatcagaagat
ggaacaaacaggatcttatacgtgttgattgtcatcttgtttttcgtgacactaattggc
attgtcgtcttcatcgtatactacaagaagaaggggaaaaagctgacagcagatctacag
aactgggctaatgaagtgtgcagccaaataaaaggaacaaaggaacctcccagagatgct
tttgttactgtaaacatcacaaatgctgctgtgccccagacctctgaagacacgtgtctc
ctggtcccctcgggctctcctgtccctggaaactcgtgctgcacctctggtcacactcct
tgcaggaatgagagccccagcacagagccttgtgaggcaggagggttttctgcggtgact
gagactgatgactaccaattcccaccagttcccacggaagatgaatacatggataaggat
ctccataacactgattatttatcgttactcagtcagactgccagtaaaaccgtgtcatcg
ttatcagaaccagtggaggcaggggagaatgacagcttgaaccagtacttttcaggtatt
gggagcacagaggatgtatcagtctctcaaggctttcaccctccctccaacacagatggg
gcacacgttgccaccgaacaacttctacagaaatcttgccaacatggccacggttgcccg
aaggaaacaggcaacaaagacacagatcattttgcgacaaactgtgactcagagaagatc
tgtgtgaggtgtggcattttgtacagagaatctccccaaaagtgtgacaaaccctgttgt
gcagcggctgacagcacctccacctccccagaaactgcttcttgtgcccagtgcacctgt
ggtttgaattctctctctgctggtcagagcactctagcaaatgatcttggtatggaagat
gcaccttcagatagtaccaacatgaagtaccagagcacaaacagaagcacttcagggacg
cacagaagcacttcagggacacacagcagcacttcagacctccctccagcatctggaaat
gtgactggaaacagtaactccacctttatttcaagtggacaagtaatgaatttcaagggc
gacatcattgttgtctaccttagccaaaactctcaggagggggcgacggcctcggggccg
agcgaggagaacgtgggcagccccgtgcaggaggagaacctcagccgctgcgagactttc
gcgggcaatgcccagcactacaaggagaagtgtgcggagctgcagggcgcctgcccggcc
ccggggagcggggggccacggtggcctgggggagccctggcccgggagcggggcccgtcc
tgcggtggacaagcctcccagcccgtgcaggaggaggggaaactgggacacttctcggag
aaggtgttgaactga
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