Hirundo rustica (Barn swallow): 120758196
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Entry
120758196 CDS
T09369
Symbol
PLXND1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-D1
KO
K06822
plexin D
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120758196 (PLXND1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120758196
NCBI-ProteinID:
XP_039932115
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All DBs
Position
12:complement(20536452..20603487)
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AA seq
1946 aa
AA seq
DB search
MAPAPVPAPVPAAGAEPRSPALLPLLLPLLPLLLPGRAAGLEVQRKFLSPTLTNNFALDG
PGSRVYLAAVNRLFQLSGGELALEAEAAVGPVLDSPLCHAPQLPQASCEHPRVLTNNYNK
ILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVRFPPGGSDSVAVFPSMLNVAANHPN
ASTVGLVLRRGGGGGARLLVAATYTGFGSPFFPRNSSLEDHRFENTPEIAIRALNARGDL
AKLFTFDINPSDDNILKIKQGDKARHKLSFVRAFLQHGAAPPARRPYAYLALNSEANAGD
KESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPARA
AWRSPGAPQGPALAPPPLEELLFGVFERAGAGGGRGRPQSALCVFRFAEIEETIRAARNS
CFVSPAAGMVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAIVNPVTATPIFT
YSGLTAVAVASVNNYTVVFLGTASGGLLKINLDSTMEVISRRSISVAYGEPVHPIMQFDP
SDSTYLYLMTSYQMTRVKVAACSQYATCGECLAAADAYCGWCTMETRCSLQHECTNFTGA
NFWASVSGGVQQCPSMTILEPEINIDKENPALIIQINGTIPNLNGTNISCDYGNNIHTVA
RVAGDYVNQFIYCSLLPHEKYPAFPDDQDHVVVETSLRVNNKNIIRANFTIYDCKRIGNI
YPKRACTSCLSARWRCHWCPSAYSCVSNRSQCEDALRMEQKKIDCPRIVPAPLEPMPTDV
SRNIIISLANATFSKETALECHFGTDRTFEAQWVNSSAVECVHVLLHTSEKSHHFPVNLQ
LKDKPDRFIDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSESSSSCRLQTEPPQV
SEVCPPPEIRKIEPLRGPLEGGTLLTVHGRNLGRRFSDIQGAVRVGSVHCAPLPDRYVVS
ETVVCQTGEAQEAFSDVVTVNVSREGRSRERYSYVLPVVQSIAPPNGPKAGGTRVTIRGS
RLDVGSELRVLINSSKQCTDLSRTDSTITCTMPAAELTTAVPVCVQFENKSCASHNITFK
YEKNPVISDINPKKSQISGGRIITLEGRGFGLVQNVSMAVRGIGREHTRCRVHTDTAITC
PSPAASNVTVGSKPAPVDFYLNGRLYTDERSPLDEEMYPEEALRISKFSLGYYADPQFST
AKKEKWIKHHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINESL
SSSERQLPVTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRA
ERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFF
PKCSSLYEECYILPSQQLSSQVGSQVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLNN
KHFLIVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNP
KLMLRRTESVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARY
TLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQ
WPRVEDVDLEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKD
TTLSRVKDLDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLD
DLFKAILSIRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNP
QFVFDIDKTDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYY
KQIHDMPPLSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTK
RTQLQHKFEQVIALMEDNIYESCSEA
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggctccggctccggtcccggctccggtcccggcggcaggcgctgagccgcggtccccc
gcgctgctgccgctgctgctgccgctgctgccgctgctactgcccggccgagccgccggc
ctggaggtgcagcgcaagttcctctcgcccaccctcaccaacaactttgcgctggacggc
cccggctcccgcgtttacctggcggccgtcaaccggctgttccagctgtcggggggcgag
ctggcgctggaggcggaggcggcggtggggccggtgctggacagccctctgtgccacgcg
ccgcagctgccgcaggcgtcctgcgagcaccccagggtgctcaccaacaactacaacaag
atcctgcagcccgacccggagcagggcgtccttgtcgtctgcggctccatctaccagggc
ctctgccagctgcgcagcatggcaaacatctcggcggtggccgtgcgcttcccgccgggc
ggcagcgactcggtcgccgtcttccctagcatgctgaacgtcgcggccaaccaccccaac
gcctccaccgtggggctggtgctgcgccgcggcggcggcggcggggcgcggctgctggtg
gccgccacctacaccggcttcggcagccccttcttcccccgcaacagcagcctggaggac
catcgcttcgagaacacgcccgagatcgctatccgtgccctcaacgcccgcggcgacctg
gccaagcttttcaccttcgacatcaacccctccgacgacaacatcctcaagatcaagcag
ggcgacaaggcgcggcacaagctcagcttcgtccgcgcgtttttgcagcacggggccgcg
ccgcccgcccgccgcccgtacgcctacctggcgctcaacagtgaggccaacgcgggcgac
aaggagagcccggcgcacagcctgctggcccgcatctgcctgggcgagccagccgaggcc
accctcaacggcagcggcgagaccaagaagctgaccgagtcctacatccagctggggctg
cgctgcggcggcgccgccgacgccttcacccgcctcgtctccgtcttcccggcgcgggca
gcttggcgcagccccggcgctcctcagggcccggccctggccccgccgcccctcgaggag
ctgctcttcggcgtcttcgagcgggccggagccggcggcggccggggacggccgcagtcc
gcgctctgcgtcttccgcttcgccgagatcgaggagaccatccgggccgcccgcaactcc
tgcttcgtcagcccggccgccggcatggttaccgtgctggacagcgtggtgcagggcacc
ggcccggcctgcgagaagaggaatatacagctgcagccggagcagctggactgtggagcc
gcacaccttcagcacccactggccatcgtgaaccccgtcacggccacccccatcttcacc
tacagtggcctgaccgcggtagcggtggccagtgtcaacaactacacggttgtgttcctg
ggcacggccagcggaggactcctgaagattaacctggacagtacgatggaggttattagc
aggagatccatttcggtggcttacggagagcctgtccatcccatcatgcaatttgaccct
tctgattccacatacctctacctgatgacctcctaccagatgactcgggtgaaggtggct
gcctgcagccagtacgcgacgtgcggggagtgcctggctgccgcggacgcctactgcggg
tggtgcaccatggagaccaggtgttctctgcagcacgagtgcaccaacttcacgggggca
aatttctgggcgagtgtgagcggaggagtgcagcagtgcccttccatgaccatcctggag
cctgagatcaatatcgacaaagagaacccggccctgataatacaaataaatggaactatc
ccaaacctgaatggaacaaatatttcatgtgactatggaaacaacatccacacggtagcc
agagtcgctggggattatgtaaaccaatttatttattgcagtttgcttccacatgagaag
tacccagcgtttcctgatgaccaagatcacgtggttgttgaaacttctctccgggtcaac
aataaaaacattatccgggccaatttcaccatctatgattgcaaaaggattggaaacatt
tacccgaagagagcgtgcaccagctgcctctcggccaggtggaggtgtcactggtgcccc
tctgcctacagctgcgtctccaaccgctcccagtgtgaggatgctctgcggatggagcag
aagaaaattgactgtcctcgaatagtacctgcccctttggagccgatgcccacagatgta
tctcggaacatcatcatctcactggccaatgcaactttctctaaggagacagctctggaa
tgccattttgggacagacaggacatttgaggcgcagtgggtgaactcctctgccgtggag
tgtgtacatgtgctgctccacacatcagaaaaaagccatcacttcccagtgaacctccag
ctgaaggacaaaccagacagatttatcgacagtccggagatgatgacagtggaggtgtac
aactgcgcgaccggcagtgccgactgctcccagtgcctggggagggaggacctggggcac
cgctgcctctggagtgagagcagctccagctgcaggctgcagaccgagcctccacaggtc
tctgaagtctgcccacctcctgagattcggaagatcgagccgctgcgagggcccctggag
gggggcacgctgctgaccgtccacgggaggaacctgggccgccgcttcagcgacatccag
ggcgccgtccgggtgggcagcgtgcactgcgcccccctgcccgacagatacgtcgtctct
gagacagtcgtgtgccagaccggagaggctcaggaggcgttttcagatgtggtgacagtt
aacgtgagccgggaagggagatccagggagcgctactcctacgtgcttcccgtggtgcag
tccatagctcctccaaatggcccgaaggcaggaggaacaagagtgaccatcagaggcagc
aggctggatgtcggctcagagcttcgtgtcctcatcaactcctccaagcagtgcacggac
ctcagccgcaccgacagcaccatcacctgcaccatgcccgccgcagagctcaccacggcc
gtgccagtctgcgtgcagttcgagaacaagtcttgtgccagccacaacatcactttcaag
tatgagaagaacccggttatatcagacatcaaccccaaaaagagccagatcagcgggggc
aggatcatcaccctggaaggaagaggttttgggctggtgcagaatgtgtccatggctgtc
cgtggcatcggcagagagcacacgcgctgtagggttcacactgacacggcgatcacctgc
ccctctccagccgcctccaacgtcactgtggggagcaagccagcccctgtcgatttctac
ctcaacgggcgcctctacacggacgagcgctcgcctctggatgaggagatgtaccccgag
gaggccctgcgcatcagcaaattcagcctgggctattatgctgacccccagttctccaca
gccaagaaggagaagtggatcaagcaccatcctggcgagcccttaacgctggtcatacac
aaagagcctgacagcctgggcctggagagcaatgagtaccaggtgaaaatcggcctgatc
tcgtgtgagatccagattgtttcggacaaagtcatccactgctccatcaacgagtcgctg
agctcgtcggaaaggcagctgccagtgacgatccaagttggaaagttcaactacacaatt
gccatgctgcaccttgggggaggagaaaccgcgatcattgtctccatcgttatctgcagc
atcctgctggtcctctctgtcgtagctctctttgtgttctgcacaaagagccgcagagct
gagcgctactggcagaaaaccctgctccagatggaggagatggagtcgcagatccgggag
gaaatccgcaaaggttttgcagagctgcagacagacatgacagacctgaccaaggagcta
aaccgcagccaggggatccccttcctggagtacaagcactttgtcaccaggacattcttc
cccaaatgttcctctctctacgaggagtgctacatcctgccatcccagcagctcagctca
caggtgggctcccaggtccaagaaacacacccactcctggtgggggagtggaagatccct
gagaactgcagacccaacatggaagaaggaatttctctgttctctaccttactcaacaac
aagcacttcctcattgtgtttgtccatgctcttgagcaacagaaggactttgctgtcaga
gacaggtgtaacctggcctccctgcttactattgcattgcacgggaaactggagtattac
accagcatcatgaaggacctcttggtggatctaattgatgcttcagcttccaaaaacccc
aagcttatgctgaggaggacagaatctgtggtggagaagatgctcaccaactggatgtcc
atctgcatgtacagctatctcagagagaccgtcggagagcccttcttcctgctgatctgt
gctatcaaacagcagatcaacaagggttccatcgacgccattacagggaaggccaggtac
accctcaacgaggagtggctgctgagggagaacatagaggcaaagcccaggaacctcaac
gtctccttccaaggctgtgggatggactccctgagtgtcagagccatggacacggacaca
ctcagtcaagtgaaagagaaaattctggaggccttctgcaagaatgtcccctactcccag
tggccaagggtggaagacgttgacctcgagtggttcgccaccagcactgacagctacatc
ctgcgggacctcgatgacacctcggtggtggaggacggcaggaagaaactcaacacatta
gcacattacaagatccctgaaggggcatccctggccatgagtttgacggacaagaaggac
accacgctgagcagagtgaaggatttggacactgaaaagtacttccacttggttctccca
actgacgaatcagtggaacataagaagtcccacagacagagtcataggaagaaggttctt
ccagagatttacctgacacggctactctccaccaagggcacactccagaagttcctggat
gacttgttcaaagccattctcagtatccgagacgataaaccacccgtggctgtgaagtat
ttctttgacttcctagaggaacaggcagagaagagagggatcacagaccctgacacactg
cacatctggaagaccaacagcctaccactgagattttgggtcaacatcctgaaaaacccc
cagttcgtctttgacattgacaagacagaccacatcgacgcctgtctgtctgtgattgcc
caggccttcatcgacgcctgctcgctctccgacctgcagctgggcaaggactccccgacc
aacaaattgctgtatgccaaggagatccccgagtaccggaagattgtgcagcgatactac
aagcaaatccacgacatgccccctctgagtgagcaggagatgaacgcccacctcgctgag
gagtcgcggaaataccgaaatgagttcaacaccaatgtcgccatggctgagatttacaaa
tacgccaagagataccgctcgcagatcgtggccgccctggacgcaaaccccacgacaaag
cgcacccagctccagcacaaatttgagcaagtgattgcactcatggaggacaacatctat
gagtcctgcagtgaagcctag
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