Hirundo rustica (Barn swallow): 120758334
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Entry
120758334 CDS
T09369
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120758334 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120758334 (NUP210)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120758334 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_6th
Big_2
NUP210_Ig
AlphaC_N
S1
Motif
Other DBs
NCBI-GeneID:
120758334
NCBI-ProteinID:
XP_039932404
LinkDB
All DBs
Position
12:1046780..1133056
Genome browser
AA seq
1882 aa
AA seq
DB search
MAPPAPGALPLLLLLHLAASSKLNTPKVLLPFTRGTRVNFTLEASEGCYRWSSTRPEVAS
IEPLGQDGCRCSQRALVQARSSQPTRLTAIISAEDTLTGQVLRCDAIVDLIHGIQVVSTT
RELYLEDSPLELKIHALDSEGNTFSTLAGLVFDWTVVKDPEADGFSDSHNALRILKFLES
TYIPPSYILEMEKVAKQGDTILVSGMKTGSSKLKARLQESIYKDVHPAEVRLLILENILL
NPVYDIYLLVGTSIQYRVQKLRQGKITEIAMPSDQYELQLQNNVLHPKGDLSRPVAKLDR
ATSTVTALQQGQANLVLVHKNIRMQGVSRLPNSTVYVVPPAYLGFTVHPGDRWVLETGRL
YEITIDVYDKSSNKVYLSDNIRITTELSKEYFEVLQSSLNGSYHYVMAVKAGLTTIDAAL
TSVVDQDGGVHTLPVPVQNQQDVEIYVPIFLLPSILMFPWQPRAGVYQYTIQAQGGSGNF
SWSSSNQAVATVTVKGVMSTGSDAGVSIIQAFDVRNPLHYGEMKVYVSEPSAMEFAPCRV
EAHVGQVLELPLRISGRTGGDGAELVPLSDCSHLELALELENPAVFSPLEGRLKPTADFC
SGVRVKAEFQGSTRLVAVYTHGQVRLSASIAIAAYLPLRVIDPPSVALVTLGSSKDMLFE
GGPRPWVQEPSKFFRNVTAEDAESIALSLLEPPTPRNNNQHWVRVLCRSLGEQVITLTVG
NSPTVTNPFPVVEPAVAKFVCAVPSRLALIPVYGSPQLDLSCPLLQQNKQVVPVSNYRNP
MLDLAAYDQQGRKFDNFSSLSVVWESTNKAIARIEPELPMELTLKEEGNGQKKMHGLQTV
VVDREFGTAAISATATGFQQPHLKAARAKLQHEAVLPGPATIELMLVEDVKVSPAGLSIY
NHPDVQAKLLIQQGSGYFFINTSVPNIVRVTHEETQGVALVQPLLPGSVTVMIHDLCLAF
PAPAEAEIHVSDIQELYVRVVDKVEIGKTVKAYVRVLDDSKKPFLAKYFPVMDLSLRAAS
QLVSLVPLREALDDHTAAFLVRGMSIGQTSLMATVADRRGQRISSAPQQIEVFPPFRLLP
RKVTLIIGAMIQITAEGGPQPLSNIIFSIDNKHIASVNGSGLVRGVAIGTGVVTGVLQAV
DAETEKLVAVSQDKVEVEVVQLTAVRIRAPITRMKAGTQMPVYVMGITSTQTPFSFGNAV
PGLTFHWSVTKRDTLDVRTRHSEAAFQLPANYNFAVDVYGRVKGRTGLKVVVKVLDAAAN
QFYNMARELSDEIQIQVFEKLHLVTPEVETEQILMSPNSFIKLRTNRDRVASLSYRVLDG
ADKVPVVKIDERGFLVSGSVIGSSTIEVTSQELFGINQTIIAAVKVCPISYLRISMRPVL
LTQNKEALLALPLGLTLTFTVHFHDNSGDTFHSHNAVLSFATNRDDLVQIAKGAANNTFV
VRTVNVGLTLLRVWDAEHRGTADYIPLPVQHAIFPELPDVVLGDVLCLRTSLTAQEGLPG
VWSSSSSALLLVDSKTGVALARDSGLVTVFYEIPGLLKTYREILINAPQRTTAMHVSGMQ
ASLQGAAASKVIVSIGESNKNLKGECSPAQTEAIAELQPQSIISCHLDFSSDAFDFPAQD
IFVAEPGFDAVSGHYTCSIRMHSLADKQLKQLSRSKAALRVTAALRGGAVPGERLGTEVP
FNRWFYADQAEMLLSNQDVSSVLKIFGASEILDSLEVKCESPAVKVLEKEKSYGLPSYVV
YTVSLADPRVPSQGSLSTSLTVSSPVTEQSLSIPVTVIYLTDRTTTPIRYEASLFQQFVE
SYQVMIFTLFALLAGTAVMIIAYHAFFSPNGQHNQLVFHPRTSLQHSPDSSLVSPAHSFS
SQASSRQSSPSAPLWSTGYASR
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggctccccccgcgcccggggcgctgcctctcctcctcctcctgcacctcgccgcctcc
tccaagctcaacacccccaaggtgctgctccctttcacccgcggcacccgcgtcaacttc
acgctagaggccagcgagggttgctaccgatggtcgtccacgcggccggaggtggccagc
atcgagccgctggggcaggacggctgccgctgctcgcagagagcgctggtccaggcgcgc
tcctcgcagcccacgcgcctcaccgccatcatctctgccgaggacacactgactggacaa
gtgcttcgctgtgatgccattgttgatttgattcatggcattcaagtggtgtccacaacg
agagagctctacctcgaggattcaccgctggagctcaaaattcatgctttggattcagaa
ggaaacactttcagcactttggcagggttggtgtttgactggacagtggtgaaggaccca
gaggccgatggcttctcagactcgcacaatgctctacgtatactcaagttcttagaatcc
acttacatcccaccttcctatatattggaaatggagaaagttgccaagcaaggagatacc
atcctggtgtctggaatgaagacagggagttctaaattaaaggcaagacttcaggaaagc
atctataaggatgtacaccctgcagaagtcagattgcttattttggaaaacatcctttta
aatccagtgtatgacatttatcttctggtaggaacatcaattcagtacagagttcagaaa
ctgaggcaagggaagatcacagaaatagcgatgccatcagaccagtacgagctgcagctc
cagaacaacgtcctccatcccaagggagatctctcccggccagttgccaagctggaccgg
gcaacatccactgtgactgcattgcagcagggccaagccaacctggtcctggtgcacaag
aatatccgcatgcagggggtgtccaggctgcccaacagcactgtctatgtggtacctcct
gcgtatttgggatttacagttcatccaggtgacagatgggtcctggaaacgggcagactt
tatgaaattacgattgacgtgtatgataaatcaagcaataaggtgtatttatctgataac
atcaggattactacagagctgtccaaagaatactttgaggtgctgcagtcctctctgaat
ggatcctatcactatgtgatggcagtgaaggcgggcctgaccacgattgatgctgccctg
acgtcagtagttgatcaggatggaggtgttcataccttaccagttccggtgcaaaaccag
caggatgtggagatctatgttccaatatttcttttgcccagcattctgatgtttccttgg
cagccaagagcaggagtgtaccagtacaccatccaggctcagggtggaagtggcaacttc
agctggtcctcttctaaccaggcagtagccacagtgacagtcaaaggagtcatgagcact
gggagtgatgctggggtcagcatcatccaggcgttcgacgttcggaatccgttgcattat
ggagaaatgaaggtgtacgtcagcgagcccagcgccatggagttcgctccctgccgggtg
gaagcgcacgtggggcaggtgctggagctgcccctgaggatcagcggccgcaccggcggg
gacggggctgagctggtgcccctgagcgactgctcacacctggagctcgccctggagctg
gagaaccctgccgtgttcagcccgcttgaaggaagacttaagcccactgctgatttttgc
agcggggtgagggtgaaggctgaatttcaggggtccaccaggctggtggcggtgtacacc
cacgggcaggtgcgcctcagtgccagcatcgccatcgccgcgtatctgcctctgagggtt
attgatccgccatctgtcgctttagtgactttgggctcctctaaggatatgttgtttgaa
ggaggaccgaggccatgggtccaagaaccttccaagttcttcaggaacgtcactgctgag
gatgcagaaagcattgccctgtctttactcgaaccccccacacctcgaaacaacaaccag
cactgggttagggtgctgtgcaggagcctgggagagcaggttattaccttaacagttggg
aacagccccaccgtgaccaaccccttcccagtggtggaacctgctgtggccaagtttgtc
tgtgctgtcccttcccggctggctttgatccctgtttatggcagccctcagcttgatctc
tcctgccctttgctccagcagaacaagcaagtggttcccgtttccaattaccgcaatcca
atgctggatttggctgcctatgaccagcaaggcaggaaatttgacaacttcagctctctt
agtgtggtgtgggaatccacaaataaggccattgctcgtattgagcccgagctgccaatg
gagctgactctgaaggaggaggggaatggtcagaagaaaatgcatggcttacagactgtg
gtagttgaccgtgagtttggaactgctgccatctctgccactgccactggattccagcag
ccccacctgaaggcagccagagccaaactacagcacgaagctgtgctcccagggcctgcc
accatcgaactgatgctcgtggaagatgtgaaggtgagccctgctgggctctccatctac
aaccaccctgatgtccaggcaaagcttctcatccaacaaggttctggatattttttcatt
aataccagcgtgccaaatattgtaagagtgacacatgaggagactcaaggcgttgctttg
gtgcagcctctgctcccaggatcagtgactgtcatgattcatgacctgtgtctggctttc
cctgccccagctgaagctgaaattcatgtgtctgatatccaggagctgtatgtgcgagtt
gttgacaaggtggagattggaaaaacagttaaggcttatgtcagagttctggatgattca
aagaaaccttttttggcaaaatacttccctgtcatggatctcagtctcagagcagcatct
cagcttgtctcacttgtccccctgagggaggctctggatgaccacactgctgctttcctg
gtgcgtgggatgagcattgggcagacgagtctgatggcaactgtggctgacagaagagga
cagagaatcagctctgctccacagcagattgaagtctttcccccatttagactactgcca
aggaaagtgaccctaattattggggccatgattcagatcactgctgaagggggcccccag
cccctctccaacatcattttctccatcgacaacaagcacattgcatcagtgaacggctct
gggctggtcagaggagtggccattggcactggggtggtgacaggagtgctgcaggctgtt
gatgcagagacagagaagcttgtggcagtgtcccaggacaaggtggaagttgaggtggtg
cagctgacagctgtgagaattcgggcacccattactcggatgaaagctggcactcagatg
ccagtttatgtcatgggcatcaccagcactcagactcctttctcctttggcaatgctgtg
ccagggctaacgttccactggtctgtcaccaagagggacactctggatgtcaggaccagg
cacagtgaggctgcttttcagcttcctgcaaactacaactttgcagtggacgtttatggc
agagtcaagggaaggacgggcctgaaagttgtagtgaaggtccttgatgctgcagccaac
cagttctacaacatggccagagagctgtctgatgaaatccaaatccaggtgtttgaaaaa
cttcatctagtcactccagaggtagaaacagagcagatcttaatgtcaccaaattccttt
atcaaacttcggaccaacagggaccgagtggcctcgctgagttaccgtgtcctggatgga
gcagacaaagtacctgttgtgaaaatcgatgagagaggattcctggtctctggctctgtg
atcggctcctcgaccatcgaggtgacttcccaagagctgtttggcatcaaccagaccatc
atagctgctgtgaaggtctgccccatctcctacctcaggatctccatgaggccagtcctg
ctcacccagaacaaagaggcactgctggccctgcccctggggctgacactgacgtttacg
gtccatttccacgataactctggagatactttccattcacacaatgctgtgctcagcttt
gccaccaacagagacgacttggtgcagatcgccaagggagccgccaacaacaccttcgtg
gtcaggactgtgaacgtggggctcaccctgctcagggtgtgggatgcagagcaccgtggc
actgcagactacatcccactgcctgtgcagcatgccatcttcccagagctgccagacgtg
gtgctgggggatgtcctgtgcctgaggacctcgctgacagcacaggaaggcctgccaggc
gtgtggagctcctcctcaagcgctcttcttctggtggactccaagactggcgtggccctg
gcgagggactcggggctggtcacggtgttctatgagatccccgggttactgaaaacctac
agagagatcttgattaatgcccctcagaggaccacagcaatgcatgtcagcggcatgcag
gcaagcttgcagggagcggcagcctcaaaagtcatcgtttcaattggggaaagtaacaaa
aacttgaaaggggagtgttcacctgctcagactgaggccattgctgagttacaaccccag
tccattatcagttgccatctcgatttcagcagtgatgcctttgacttcccagcacaggat
atttttgtggcagagcccgggtttgatgcagtttcaggacactacacgtgctccatcagg
atgcacagcctcgctgacaagcagctgaagcagctgagcaggagcaaagccgcgctgcgg
gtgacggcggcgctgcggggcggcgccgtgcccggcgagcggctgggcacagaggtgccc
ttcaaccgctggttctacgccgaccaggccgagatgctgctcagcaaccaggacgtcagc
tccgtcctgaagatcttcggtgccagtgaaatcctggatagcctggaggtgaaatgcgag
tccccggcagtgaaggtgctggagaaggagaagtcctacgggctgcccagttacgtggtg
tacactgtgagcctggctgatcccagggttcccagccagggctccctgtccacctctctg
actgtctccagtcccgtgacagagcagtccctcagcatcccagtgacggtgatctacctg
accgacagaaccaccactcccatcagatatgaagccagtctcttccagcagtttgttgag
tcttaccaggtgatgatcttcacgctttttgcactcttagcagggacagctgttatgatc
atagcctaccacgcgttcttctcgccgaacggacagcacaatcagctcgtattccaccca
aggacaagtcttcagcacagccctgacagttccctggtgtcccctgcacattccttcagc
tcgcaggcgtccagcaggcagagcagcccctcggccccgctctggagcacgggttatgcc
tctcggtga
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