Hirundo rustica (Barn swallow): 120758337
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Entry
120758337 CDS
T09369
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120758337 (RNF123)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120758337 (RNF123)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120758337 (RNF123)
Multi subunit type E3
KPC complex
120758337 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120758337
NCBI-ProteinID:
XP_039932408
LinkDB
All DBs
Position
12:complement(6674575..6724161)
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AA seq
1308 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLTTEPEKSKVTGIVNSRLLNDYLHRVFTSADGNQPAAAYRKHLT
FQNLQEHLERLLAEENGSEDSRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLLKARKLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRYFWDGHKAKTPAALSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANILIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
ALAIGGGLARPAWLSSPTLGRANRFLSTAAVSLMNPRRPLGSLEKIKVLTLRVEQRTRED
IEGTHGNEGLLLGRPPEEPDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMAELL
RSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTVTLAPEIFLDWTRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPG
LESVDHYPILVAVTGILVRLLVDTDAQGTERATAVLLADPCFQLRSIQYLLGHAEPSALA
AAAAATDKRHFSLHTYTEYISTEELAKVEKMLNHLSEEFKQAAATTLPTSEEDLCPICYA
HPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaagaggtgctgggactgctttctcaaggaagaattacaggctgaccactgag
ccagagaagtccaaggtcacagggatcgtgaacagcaggctgctgaatgattatctgcat
cgagtctttaccagtgctgatgggaaccagcctgcagctgcttacaggaagcacctgacg
ttccagaacctacaggagcaccttgagcgattgctggcagaggagaatggctctgaagac
agcagagatcaagtggcagagggccggctcggtccctccactgtggtgttggaccacaca
agcggctttgaggggctcctgctggtcgatgatgacttacttggggtgattggccacagt
aactttgggtccatcagagccactacatgtgtgtataaagggaaatggatttatgaggtg
ctcatctcctcccaggggctcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggcgttggggacacaccagactcatatgcctacgatggaaacagggtgcgc
aagtggaacgtgactactacaaactacggcaaatcctgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcctgaacggcatatctctggga
actgcctttgataacatcacgaggggtgctggaatggcttatttccctgccatcagcctc
tccttcaaagagtccgttgcttttaacttcggaagccgtccgctccgttatcccgtggaa
ggttaccggcccttgcaagatcctcctgtggcagacctgttgaaggctcggaagctgttg
ggctacttgaagaatgtgatccatattggaatagatgtgacggaggggaagctggtggag
aaagacacatccatgtggcagctgcagggagaacccacggtgttgattacattagctcac
atcttcaattatttctcccctctgatgtgcaaggtgtacctggtggaagatgtgctcatg
accttcctgttgagcatccttgagcgaggaggggcagtggaggcccacccccttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctcaag
cagctactgatgtccctgctgcgggcttacaggttctcccccatcatcccagacctggga
ttacaaatccactacctccggctcaccattgcagtcttgaagcatgagaaatctaggaaa
tacctactcagcaatgttctcttcgacgtgctccgttctgttgtgttcttctacatcaag
agccctctgcgagtggaggaggcaggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaggtgaaagaggagagtgctgaggag
agattgaggcgtcgggcatatgaaagaggctgccagcggctcaagaaacgcattgaagtg
gtggaaggtctccaggttcagattctgaagttgctgctgaacaacaaggaccgaggaggg
ggggaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaggaaaacgct
agcaacagagggaacttgactgtgctgtgcccaccagagtacatggtatgcttcttgcac
cggctcatcgctgccctgcgctacttctgggatggccacaaagcaaagaccccagctgcc
ctgagcagtgaagaggcctatgtccctcctcaactcttctataatgggaaggtggattat
tttgaccttcagcgacttggaggtcttttgtctcatcttaagaagactctgaaagatgac
ctggctgcaaaagccaacatcctgattgaccctgcagagctgcaggcagtaactatggat
gatcttgatgaagatgaggaatcagcaacatcagcagcacagtcccagcgcccctctgcc
gccctggccattggtggaggtcttgccaggcctgcctggctcagctcccccaccctgggc
cgggccaaccggttcctgagcacggcagccgtgagcctgatgaacccgcggcggcccctg
ggttccctggagaagatcaaagtgctcacactgcgagtggagcagcgcacaagggaggac
attgaaggcacccatggaaatgagggtctcttactgggcagacccccagaagagccagac
cagcccattactgagaactccctcctggaagtcctggatgggatagtgatgatgtacaac
ctcagcgtccaccagcagcttgggaagatggttggtgtgtcagatgatgtgaatgaatat
gccatggcactgaaagacacagaggagaaaatcagccgctgcccaaagaggaggagagac
atccatgaggagcttctgaagagccaaaaggtcttctccgagaagctcaaccacctgagc
cggcgcctcgcttggataaatgtcaccatttattcaaaggagaagatgcaggatatctac
tggctgctgcgagtgtgcatccgcaccatcgagcacggtgacagaacgggctcgcttttc
gctttcatgccagaattctacctcagcgtggctatgaacagctacagcgctctcaagaac
tacttcagccctgtcaacagtatggaggaacttccaggctatgaagagaccctcatgcgc
cttgctgccatcctggccaagcattttgctgactcgaggattgtgggcacagacatccgg
gactccctgatgcaggcgttggccagctacgtctgctacccccactcgctgcgtgctgta
gagaggatcccagaagagcagcggatttccatgatgaagaacctcctggctccctatgag
cagcgaccctgggcacaaaccaactggatccttgtcaggctgtggcggggctgtggcttt
gggtacagatacacacggctcccacacctgctgaaaaccaagcctgaggatgccagcctc
cccagcctgcagaagccatgtccctccacgctgctgcagcggcacatggcagagctgctc
cgcagcgaccgcgacctggcccccagcttcctcaacagcgtcctgaaccagctgaactgg
gcgttctccgagttcattggcatgattcaggagatccagcaggcagcagagcgcctggag
aggaacttcgtggacagccgccagctgaaggtgtgtgccacctgctttgacctgtcggtg
agcctgctcagggtgctggaaatgaccgtcacgctggcaccagagatcttcctcgactgg
actcgcccgtcgtcggagctgctgcttcggaggcttgcccagctcttgaaccaggtgctg
aaccgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgccaggg
ctggagagcgtggaccattacccaatcctcgtggctgtgacggggatactggtccggctg
ttggtggacactgatgctcaggggaccgagcgcgcgaccgcggtgctgctggcggatccc
tgcttccagctgcgctccatccagtacctgctgggccacgccgagccctcggccctggca
gcagccgccgcggccacggacaagcgccacttctccctgcacacctacacagagtacatc
agtactgaggagctggcaaaggtggaaaagatgctgaaccatctgagtgaggagttcaag
caggcagctgctaccacattgcccaccagcgaggaggacctgtgccccatctgctacgca
caccccatctcggccatcttcaggccctgctcccacaagtcatgcaaagcctgcatcaac
cagcacctgatgaacaacaaggactgcttcttctgtaaggccaccatcacaggggtggac
gacttcaccaagccagccagctcgtaa
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