KEGG   Hirundo rustica (Barn swallow): 120758389
Entry
120758389         CDS       T09369                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
hrt  Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hrt03037]
    120758389 (IFT122)
Cilium and associated proteins [BR:hrt03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   120758389 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Beta-prop_EML_2 Zn_ribbon_IFT122_C WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 TPR_GEMI5 Beta-prop_WDR19_1st Beta-prop_Vps41 NBCH_WD40 TPR_IF140-IFT172 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 TPR_IFT80_172 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 eIF2A WDR90_beta-prop_4th PEP5_VPS11_N TPR_7 WD40_MABP1-WDR62_1st TPR_COPA_B Beta-prop_WDR75_1st ANAPC3 TTC7_N Beta-prop_IFT140_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 120758389
NCBI-ProteinID: XP_039932513
LinkDB
Position
12:20491635..20521958
AA seq 1185 aa
MRAALTWRDRAEQCIYDIAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWS
PEQKSVSKHKTSCKITCCSWTNDGQYLALGMFNGIVSIRNKNGDEKVKIERPGGSSSPIW
SICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCLSYFTKGEYLLLGG
SDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDNMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDS
ADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDNVLAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMFQYLERKMFKEAYQIACLGVTDADWRELAMEALEGLEF
ETAKKAFTRVRDLRYLELISSIEDRKKQGENNNDLFLADVYAYQGKFHEAAKLYKRSGHE
SLALEMYSDLRMFDHAKEFLGSGDPKDTKMLIKKQADWAKDINEPKAAVQMYLSAGEHMK
AIEISGDHGWVDMLIEIARKLDKAEREPLAKCAFYFKQLDNPGYAAETYMKVGDLKSLVQ
LHVETHRWEEAFALSEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHKAGRQSEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDIAQENEGQQTEMLQKFHHFQHLAEVYHVYHFI
QRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHA
YDKLQGLQIPDRFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRVSKRENKWQEMLNDHTQSLRL
DDSTDIIMEDDDPFTAKLSFEQGGSEFVPVVVSRAVLRSMSRRDVLIKRWPRPLRWQYYR
SLLPDASITMCPSCFQMFHTEDYELLILQHNCCPFCRWRTDDSNQ
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcgggccgcgctcacctggcgcgacagggccgagcagtgtatttacgacatcgcgttc
aagccggatgggacccagctgataattgctgctggaaacaggctgctggtatatgatact
tctgatggaaccctgattcagcctttgaaaggacataaagacactgtgtactgcgtggcc
tacgccaaagatggcaagcgtttcgcatctggctctgctgataaaagtgtgataatttgg
acttcaaagttagaaggaattctgaagtacacgcataatgactctatccagtgcgtttca
tacaatcctctcactcatcagttggcatcctgctcatctggggattttggcctgtggtct
cctgaacagaagtcagtctctaaacataaaacaagctgcaagattacttgctgtagctgg
acaaatgatggccagtaccttgctttgggcatgttcaacggcattgtcagcataaggaac
aaaaatggtgatgagaaagtgaaaatagagaggccaggggggtcttcctctccaatatgg
tcaatttgttggaatccttccagagatgaacgcaatgacattttagctgtggcagactgg
ggtcagaagctttccttttaccacctgagtggcaagcagattgggaaggacagagtgctc
aattttgacccatgctgcctcagctactttactaaaggagaatatctcttgctgggaggt
tcagatagacaggtttctctcttcacaagggatggggtacgcctgggcactgtgggagag
cagagcagctgggtgtggacctgcaaagttaaaccagactccaactatgtggcagtaggg
tgtcaggatggaacaatctccttctaccagctgattttcagcactgtccatggcctctat
aaagatcgctacgcctacagggacaacatgaccgatgttattgtccagcacctcatcacg
gaacaaaaagttaggataaaaggcagagagcttgtgaagaaaatagcaatctacaaaaac
agattagccatccagatgccagagaaaatcctgatttacgagttgtactcggatgactct
gcagatatgtactatcgggtgaaggagaagatcataaagaaatttgaatgtaacttgctg
gtggtgtgttcagatcacattattttatgccaggagaagagattgcagtgcctctcattt
agtggtgttaaagagcgagaatggctgatggaatctcttattcgttacattaaagtaatt
ggaggacctccaggaagagaaggcctcttagttggtctgaagaatggtcagatcctgaag
atcttcgtggacaacgtgctggcgatcgtgctgctgaagcaatccacggccgtgcgctgc
ctggacatgagcgcgtcccgcaacaagctggccgtggtggacgagaacgacacctgcctc
gtctacgacatccacaccaaggagctgctgtttcaggaacccaatgctaatagcgtggcc
tggaatacccagtgtgaggatatgctttgcttttctggagggggttacctcaatatcaaa
gctagcaacttccctgtccaccagcaaaaactgcaaggctttgttgtgggttacaacggc
tccaagatcttctgccttcatgttttctctatgtcagcagttgaagttccgcagtctgca
cccatgtttcaatatctggaacgaaaaatgtttaaagaagcctatcaaattgcgtgttta
ggagtgactgatgctgactggagggagctggccatggaagccttggaagggctggagttt
gaaactgctaaaaaggcatttaccagggtacgagaccttcgatatttagaactgatcagc
agcatagaggaccggaagaagcagggagagaacaacaacgacctgttcctggcagatgtt
tatgcctaccagggaaagttccacgaggcagcgaagctgtacaagaggagcggccacgaa
agcctggccctcgagatgtactcggacctgcgcatgttcgaccacgctaaggaatttctg
ggatctggagatcccaaagacacaaagatgctgataaaaaaacaagcagactgggccaag
gatatcaatgaaccaaaggcagcagtgcagatgtacctctctgctggcgagcacatgaag
gccatcgaaatcagcggggaccacggctgggtggatatgttaatcgaaattgctcgaaaa
ctggataaagcagagcgtgagcccttggccaaatgtgccttctattttaagcaacttgat
aaccctggctatgctgcagaaacctacatgaaggttggtgacctgaaatcattggtgcag
ctccacgtggagactcatcgctgggaagaagcatttgctctgagtgaaaagcatcctgaa
ttcaaagatgaagtctatgtcccttatgctcagtggctggcagagagtgatcgatttgaa
gaagcccagaaagcgtttcacaaggctggcaggcagagcgaggctgtgcgggtgctggag
cagttaacacacaatgccgtggtggaaagccgatttaacgacgcagcctattattactgg
atgctttccatgcagtgcttagacatagcccaagagaacgaaggacagcagactgaaatg
ttgcagaagtttcatcacttccagcatttggcagaagtttaccatgtctatcactttatt
caaagatacactgaggagcctttcagcttccacttgcctgaaaccctcttcaatatttcc
aggtttctgcttcacagcttaacaaaggagactcctttggggatctcaaaagtcaataca
ttattggccctggcaaagcagagtaaagctcttggtgcatataaattggctcgtcatgcc
tatgacaagctgcagggactgcagatcccagacaggttccagaaatccgttgagctgggc
agcctgacaatccgatccaagccattccatgacagtgaagagctcgtgcccctgtgttac
aggtgttccaccaacaaccctttgctgaataacctggggaacgtctgcattaactgcagg
cagcctttcgtcttctcggcctcctcctatgaggtgctgcatctggttgagttctatttg
gaagatggcatcacagatgaagaagctgtagctctcattgatcttgaagccccaagagtg
agtaaaagagagaataaatggcaagaaatgctgaatgaccatactcagagtttgaggctt
gatgacagtacagatattattatggaggatgatgatccctttacagcaaaactgagcttt
gagcaggggggctcggagttcgtgcccgtggtggtgagccgcgccgtgctgcgctccatg
agccggagggacgtgctgatcaagcgctggccgcgcccgctgcggtggcagtactaccgc
tccctgctgcccgacgcctccatcaccatgtgcccgtcctgcttccagatgtttcacaca
gaagactatgagctcctcatactccagcataattgttgtccattctgtcggtggagaaca
gatgactcaaaccaatga

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