Hirundo rustica (Barn swallow): 120758569
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Entry
120758569 CDS
T09369
Symbol
FBN1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04350
TGF-beta signaling pathway
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120758569 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120758569 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120758569 (FBN1)
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120758569 (FBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
hEGF
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120758569
NCBI-ProteinID:
XP_039932911
LinkDB
All DBs
Position
13:complement(9659560..9806566)
Genome browser
AA seq
2864 aa
AA seq
DB search
MWRGRLLGIALGVAVLWASQTGAAAAGQAEGVSAKESRSSRAKRRGHGGGHDALKGPNVC
GSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQHC
NIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCER
DYRTGPCFTLVTNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNI
RTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTIPGIC
DGGECSNTVSSYFCKCPPGFYTAPDGLKCIDVRPGFCFSTLSNGRCGNQLPQPLSKMQCC
CDSGRCWASAPASAPEMCPIRSTDEYRKLCTVAAMLPARPDLPPARPDIIPPPLIPGVYP
PPHPEIIYPSRAPPVHPILPVNLTDYCQTFRHLCRNGRCIPTPGSYRCECNKGFQLHGRE
ECLDIDECERNPCIGGDCVNTQGSYICQCRIGYQSTATRTECRDIDECLQNGRICNNGRC
INTDGSFHCVCNAGFQVAVDGKNCEDMDECSIRNICLNGMCINEDGSFKCICKPGFQLAS
DGRYCTDINECETDGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGGYK
RGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDINE
CLLDPDLCPNGRCENLHGTYKCYCDPGYEVDSTGKNCIDIDECALNMLLCDNGQCRNTPG
SFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTPGSFVCECSPESTLDPTRTICI
ETVKGTCWQNIVNGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQKGYSRIRGT
LCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLRHEDEQ
CTSQIPGRHRMDACCCSVGAAWGYECEECPLRGTPEFEALCPRGPGFSTKIEISGKPFSK
DINECKMFPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGICV
NTPGDFECECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQIS
PNISACVDINECELSTNLCRNGRCVNLIGKYQCACNPGYQSTQDKLYCIDIDECQIMNGG
CEDFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLCYD
GFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINECE
IGAHNCDRHAICTNTAGSFKCSCSPGWIGDGIKCTDLDECSNGTHMCSPHADCKNTMGSY
RCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSVDGKACEDI
DECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCINTAG
SYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCSLG
KAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFG
SFQCQCPSGYYLNEETRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDYMQVNGGNNC
MDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFSTL
CGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLICE
DIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCTDRNECQEIPNICSHGQCID
TVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHNND
CIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCVDINECALEPGKCSPG
TCQNLDGSFRCICPPGYILQDDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFVLS
STGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADEAF
RQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILQGAECVDT
DECAVGNPCGNGTCRNVIGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTFGS
YECKCPGGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGE
GCIDENECQTKPGLCENGRCVNTVGSYRCECNEGFTVSDTQDECLDNREGYCFTEVLQSM
CQIGSSNRNAVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYTSSGADIDECK
VIHDVCRNGECINERGTYHCLCNLGYTTDVTGTLCIDLNECNESPKPCNFICKNTEGSYQ
CSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNE
CATEINICGAKGICQNTPGSFVCECQRGFSLDQTGQSCEDVDECDGNHRCQHGCQNIIGG
YRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGGCQ
DINECGSAQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGRGQGQELSLSGEVD
DNSLSPEACYECKINGYPKRGRKRRSTNETASEAEDQQELEPPISLASWDIEKAAVFSIN
ISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPGNY
SLQISSIPLYKKKELNQLEAKHDKDYLSGELGDNLKMKIQILLH
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggatcgccctgggagttgccgtgctgtgggcgtcccag
actggtgccgccgccgccgggcaggccgagggggtgagcgccaaggagagccggtccagc
cgggccaagaggcgagggcacggcggcgggcacgacgcgctcaaaggaccaaatgtgtgt
ggatcccgttacaatgcctactgctgccctggatggaaaacgttacctggtggaaaccaa
tgcatagtcccaatctgcagacattcctgtggggatggattttgctctagaccaaacatg
tgcacatgcccaaatggtcagatagccccctcctgtggctcaaaatcaatccaacactgt
aacatccggtgcatgaatggaggtagctgcagtgatgaccattgcctctgtcagaaggga
tacacaggaacacactgtggacagcctgtctgtgaaaatggatgtctaaatggagggaga
tgcgtagctccgaatcgatgtgcttgcacgtatggctttactggaccccagtgtgagaga
gattacaggaccggcccttgcttcactttggtaaccaaccagatgtgccagggccagctc
agtggaattgtgtgcacaaaaactctgtgctgtgcaactgttgggagagcatggggccat
ccctgtgaaatgtgtcctgcccagccgcatccctgccgccgaggcttcattccaaacatc
cgaacgggggcctgtcaagatgtggatgaatgccaagccatccctgggatctgtcaaggg
ggaaattgcattaatactgttggatcttttgagtgcaaatgcccagctggacacaagttt
aatgaagtaacacaaaaatgtgatgatattgatgaatgtagcaccattcctggaatttgt
gatggaggagagtgttcaaacacagttagcagttacttctgcaagtgtcctccagggttt
tatacagctcctgatggcttaaaatgcatagacgtgcgccctggattctgtttctccacg
ctgagcaacgggcgctgtggcaatcagctgccgcagccgctctccaagatgcagtgctgc
tgcgacagcggccgctgctgggcttctgctcccgccagcgctccagaaatgtgccccatc
agatccacagacgagtatcgtaaattgtgcacagtagctgctatgctgccagcaagacct
gaccttcctccggcccgtcctgacatcatccctccaccactcattcctggggtttaccct
cctccacatccagaaatcatctatccgtctcgggctccaccagttcacccgatcttgcct
gtgaacttaacggactattgccaaacattccgacatctctgccgtaatggacgttgtatt
cccactcctgggagctaccgctgcgagtgcaacaaaggattccaactgcatggtagagag
gaatgccttgatattgatgaatgtgaaaggaacccatgcattggtggggactgtgtgaac
acccaagggtcctacatctgccagtgtcgtattgggtatcagagcacggcgaccaggacg
gagtgccgagatatcgatgaatgcttacagaatggtcgtatctgtaataatggacgatgc
ataaatacagatggcagttttcactgtgtgtgtaatgctggctttcaagtggcagttgat
gggaaaaactgtgaagatatggatgaatgcagcatcaggaacatttgcctcaatgggatg
tgcatcaatgaggatggcagttttaaatgcatttgcaaaccagggttccaattggcatcc
gatggacgctattgcacagacatcaatgagtgtgagacagatggaatatgcatgaacggg
cgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggccttgcggtagga
ctggatggacgtgtctgtgttgatacacatatgcggagcacatgctatggtggctacaag
cgaggacaatgtgtgagaccattaacgggtgcagttacgaagtcagaatgctgctgtgcc
agcactgactatgcctttggagagccttgccagccctgcccagcacaaaactcagctgaa
tatcaggctctgtgtagcagtggaactggcatgactgcaggaggaaatgatattaatgag
tgcttattggatcctgatctctgtccaaatggaaggtgcgagaatctgcatggaacatac
aaatgttactgtgaccctggatatgaagtggactcaactgggaaaaactgcattgatatt
gatgaatgtgcactgaacatgctgctttgtgacaatgggcaatgcagaaatacccctgga
agtttcacctgcacctgtccaaaaggatttgtatacactcctgatctaaaaacatgtgaa
gatattgatgaatgtgaatctaacccctgtgttaatggagtgtgcaaaaacacaccaggt
tcttttgtttgtgagtgttctcctgaaagtactttggatccaaccaggaccatctgcata
gaaactgtcaagggtacctgttggcagaacatagtcaacggaaggtgtgaaataaatatc
aatggagcaactctgaagtcccagtgctgttcctcactcggtgctgcttggggaagccca
tgtacaccatgtgaacgagacccaatatgtcaaaagggatattcaagaataagaggaaca
ttgtgtgaagatgttaatgaatgtgaggtgtttcctggagtctgtacaaatgggcagtgt
gtcaataccttgggatcgtttgtttgccagtgccccaacggaatgactttagatgcttct
ggacggacttgtcttgacattcgcttggagagctgctacctgcggcacgaggacgagcag
tgcacgtcccagatcccaggccggcaccgcatggacgcctgctgctgctccgtgggggca
gcctggggctacgagtgcgaggagtgtcctctcaggggaactcccgagtttgaagctctt
tgcccaaggggacctgggttctctaccaagatagagataagtgggaagcctttctctaaa
gacatcaatgaatgcaaaatgttccccagcctttgtacccatggaaaatgcagaaatacc
attggcagttttaagtgtagatgtgacagtggatttgccctggattctgaagagaggaac
tgcacagatatcgatgaatgccgcatctctcctgatctttgtggccaaggcatctgtgtc
aatactcctggagactttgagtgtgaatgttttgaaggctatgaaagtggatttatgatg
atgaaaaactgcatggacatcgatgagtgccagcgcaatccccttctctgccgaggaggc
acctgcatcaacacagagggaagttttcggtgtgattgccctccaggccaccagatatca
ccaaatatctctgcatgtgtagacattaatgaatgtgagctgagcaccaacctgtgccga
aacggccgttgtgtcaacctgattggaaagtatcagtgcgcttgcaaccctggatatcag
tccacacaggacaagctatactgtattgatattgatgagtgccaaataatgaatggtggc
tgtgaggacttctgtacaaactcagagggcagctatgaatgtagctgtaaacaaggcttt
gcactcatgccagaccacaggacatgcactgatattgatgagtgtgaagacaaccctaac
atctgtgatggaggccagtgtacaaacatcccaggagaatacaggtgtctctgctatgat
ggattcatggcatctgaggacatgaagacttgcatagatgttaatgagtgtgatctgcat
ccaaacatctgtctgagtggaacctgtgagaatacaaaaggctcatttatctgtcactgt
gatatgggatattcaggcaagaaaggcacaactggctgcacagatatcaatgagtgtgag
attggagcccataactgcgaccgacacgctatatgtacaaacacagcaggaagcttcaaa
tgtagctgcagccctggctggattggagatggtatcaagtgcacagatctggatgagtgc
tccaatggaacccacatgtgcagcccacatgctgactgcaagaacacgatgggctcttac
cgctgcctgtgtaaagaagggtacactggggatggtttcacgtgtacagaccttgatgaa
tgctcagaaaacttgaatctctgtgaaaatgggcagtgtctcaatgcccctggagggtat
cgctgtgaatgtgatatgggatttttgccaagtgtagatgggaaagcatgtgaagatatt
gatgagtgctcacttcctaacatctgtgtctacggtacttgtcataacctcccgggactc
ttccgatgcgagtgtgaagtgggctacgagctggacagaagtggtggcaactgcacagat
gttaatgaatgtgcagaccccacaacctgcatcagtggcacgtgtatcaacactgcaggt
agttacacctgtgagtgcccgcctgatttcgagctgaatcccacccgcgttggatgcgtt
gatacacgatctggcaactgttacctggacatcaaaactcggggagataacggtggcacc
ttctgcagcaacgagattggagtgggtgtttccaaggcctcctgctgctgctccctgggc
aaagcctggggagttccctgtgagcactgcccgctcgtgaacacaactgaatataaggtt
ctttgccctggaggggaaggattccgaccaaaccctattacagttatattagaagatatt
gatgaatgtcaagaactgcctggactttgtcaaggaggaaaatgtattaatacatttggt
agcttccagtgtcagtgtccatcagggtactacttgaatgaagagactcgagtgtgtgat
gatgtgaatgagtgtgagacacctggcatttgtgggcctggcacgtgttacaatactgtt
gggaactacacctgcatctgccctcctgattacatgcaagtcaacggaggaaacaactgc
atggatatgagaagaagcctgtgttatagaaattactatgctgacaatcaaacctgcgat
ggtgagctgctcttcaatatgaccaagaaaatgtgctgctgttcctacaacatcggacgt
gcatggaataagccttgtgaacagtgtcctatcccgagcacagatgaattctccacactt
tgtggaagtcaaaggcctggcttcttcattgacatttatacaggattaccagttgatatt
gatgaatgcagagagattcctggagtgtgtgaaaacgggatctgtataaacatggttggc
agcttccgatgcgagtgtcctgtgggtttcttctacaatgacaagctcctgatctgcgaa
gatattgatgagtgccagaacggaccagtctgccagcaaaacgcagagtgtgtgaacaca
gccgggagctaccgctgtgactgcaaacctggctacaggttcacgtccacggggcgctgc
accgatcggaatgaatgtcaagaaattcccaatatctgcagccatgggcaatgtattgac
actgttggaagtttctactgcatttgtcacaatggattcaaaactaatgatgacaggaca
atgtgtatagacatcaacgagtgcgagagagatgcctgcggcaatggaacctgcaggaac
accattggctccttcaactgccgctgcaacctgggcttcatcctctcacacaacaatgac
tgcatagacgtggatgagtgtgcaagtggaaatggaatgctctgcagaaatggtcagtgt
gtgaacaccattgggtccttccagtgtctctgcaatgatggctatgaggtggctctggat
ggaagaacttgtgttgatataaatgagtgtgcactggagcctggaaaatgctcaccaggc
acatgtcagaacttggatggctcattcagatgtatctgtcctcctggatacatcctgcaa
gatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgccctgggc
acatgcagcaacactccaggcagtttcaaatgtctgtgtccagaaggctttgtattgtct
tccacaggaaggcgatgccaagatctgagagtgagctactgttttaccaagtttgaagat
ggaaagtgttctgtgccgaagtcccgaaaccactccaaacaagaatgttgctgtgcctta
aaggggcagggatggggagatccctgtgagctctgcccagaggaagcagatgaggcattc
agacagatttgtccatttggaattggcatccttgttggacctggtgatgcaaggctggat
gtggatgagtgccttgatcctgataactgtaaatttgggcagtgtatcaacacagatggg
tctttccgctgtgaatgtccatatggttacatcctgcaaggagcagagtgtgtggatact
gatgaatgtgctgttggaaacccgtgtggaaatggaacttgcaggaatgtgataggaggc
tttgaatgcacgtgtgtagaaggattcgagcctgggccaatgatgacctgtgaagatgtg
aatgagtgcattcagaaccctctgctctgcgctttccgctgcgtgaacacgtttggatcc
tacgagtgcaagtgccccggggggtacgttctgcgggaggaccggaggatgtgcagagat
cagaatgagtgtgaagaaggaattcacgactgtgactcaaaacagatggaatgcaaaaac
ctcattggcacctacatgtgtatctgtgggcctggttatcagcgcagaccagacggggag
ggctgcatagatgagaatgaatgtcagaccaaacccgggctctgtgagaacggccgttgt
gtgaacacggtggggagctacaggtgtgagtgcaacgagggcttcacggtcagcgacacc
caggacgagtgccttgacaacagggagggctactgcttcactgaagtcttacaaagtatg
tgccaaatcggatcaagcaacaggaatgctgtcaccaagtctgaatgctgctgtgacggt
ggccggggctggggacagaactgtgaggtctgtcccttccctggcaccgtggccttcaag
aagctttgccctcacggccgaggatacacatccagtggagcagatattgatgagtgcaag
gttatccatgacgtctgccgcaatggggagtgcatcaatgagaggggaacttatcactgt
ctttgcaatctgggctatactacagatgtcaccggcactctttgcattgatctgaatgaa
tgcaatgagtctccaaaaccttgcaatttcatctgcaaaaacacagaggggagctaccag
tgttcatgtccaaaaggatacatcctgcaagaagatgggagaagctgcaaagatcttgat
gaatgtgcaacaaagcagcacaactgccagttcctttgtgtcaacactattgggggattc
acttgcaaatgtcctcctggattcactcagcaccatacagcctgcattgacaacaacgag
tgtgctactgagatcaatatctgcggggcaaagggcatttgccagaatacaccaggaagt
tttgtttgtgagtgtcaacgtggcttctcacttgatcaaactgggcagagctgtgaagat
gttgacgaatgtgatggcaaccaccggtgtcaacatggctgccaaaatataattggagga
tacaggtgcagctgcccacaaggatatctccagcattaccagtggaaccaatgtgttgat
gaaaatgaatgtctcagtgcacacatttgtggaggagcatcctgccacaatactttggga
agctataaatgtatgtgccctactggatttcagtatgagcagtttagtggaggttgccaa
gatatcaatgaatgcggttctgcacaagccccgtgcagttatggttgttcaaacactgaa
ggtggctacgtctgtggatgtccacctggttacttcagaataggacaaggacactgtgtt
tctggagtggggctaggcagaggtcaaggacaagagctttcactcagtggagaagtagat
gacaactcgctctctccagaagcttgttatgaatgtaaaatcaatggctatcccaagaga
ggaaggaaacgcaggagcactaatgaaactgcaagtgaagcagaggatcagcaagagctg
gagccgccaatcagtctcgccagctgggatattgagaaagcagcggtcttctccatcaac
atctcggatctcagtaacaaagatcgaatcctggaactgctccctgccctcacgacactg
acaaaccataaccgatatttaattgactccggaaatgaagatggtttctttagaatcaat
aagaaggacgggataagttaccttcatttcacaaagaagaagccagtgcctggaaattat
tcattacaaatcagtagtattccactctataaaaagaaggaacttaaccagcttgaagcg
aaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaaattcag
atattgcttcattaa
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integrated database retrieval system