Hirundo rustica (Barn swallow): 120759092 Help Entry 120759092         CDS       T09369                                  Symbol AFF4 Name (RefSeq) AF4/FMR2 family member 4   KO K15185   AF4/FMR2 family member 4 Organism hrt  Hirundo rustica (Barn swallow) Pathway hrt03250   Viral life cycle - HIV-1 Brite KEGG Orthology (KO) [BR:hrt00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     120759092 (AFF4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hrt03021]     120759092 (AFF4) Transcription machinery [BR:hrt03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Super elongation complex (SEC)      120759092 (AFF4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AF-4 AFF4_CHD AF4_int Motif Other DBs NCBI-GeneID:  120759092 NCBI-ProteinID:  XP_039933959 LinkDB All DBs Position 14:1142014..1189055 Genome browser AA seq 1160 aa AA seqDB search MNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYD EMTDLIGDRPLQKIVAIPKPSVPAAPDDKGAAGFFGEQRHGAGSHQSGKWTPVGPAPSTS AQSQKRSAGLGGHGQRSGGGAAAGARHERDSYGGRKKGQHGSEHSKGRSGSPGKPPAVSS LASGHSRAHGGEHHGKDHQRSKSPRDPEPSWDSPSRVPSFAGGQHSNQSFPPSLMSKSSS MLQKPTAYVRPMDGQESTEPKLSSEHYGGQSHGGGVNELKPSSKAHLTKLKIPSQPLDAS ASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYNPS SKASNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNSEG ADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNK VNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQGGSKDSISSTPGRDSKPTQKGS ESGRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSNR HKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLP PSSQTPKYSESNRTPVKSSMEEDDGFFRQRMFSPMEEKELLSPLSDPDERYPLIVKIDLS LLSRIPGKPYKDTDAAKAEKKSAPEKHARDSQKQPSDKSSTKGKRKHKQNEDENRASESK KTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHGSRKRTVSQSSS LKSSSNPGKESSSGSKSSSSSKQKKTEGKGSSSAKEAKEKILNNSSSCPPASAQATEGAK SRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNA QESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKKES ALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSG SSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFNTSI MTELVRYTRQGLHWLRLDAK NT seq 3483 nt NT seq  +upstreamnt  +downstreamnt atgaaccgtgaagaccggaatgtgctgcgtatgaaagaaagggaaaggcgaaatcaagaa attcagcagggtgacgaagccttcccacccaactctcctctctttgctgagccatacaaa gtgaccagcaaagaagacaagctgtccagccgcatccagagcatgctcgggaactatgac gagatgacggatctcatcggggaccggccgctccagaagatcgtggccattcccaagccc tcggttcccgcggcgcccgacgacaaaggcgcggccggcttcttcggcgagcagcggcac ggcgcgggctctcaccagagcggcaaatggaccccggtggggccggcccccagcacctcg gcccagtcccagaagcgctcggcggggctggggggacacgggcagcgctcgggcggcggc gcggccgcgggggcccggcacgagcgcgactcctacggcggccgcaagaaggggcagcac ggctcggagcactccaagggccgctccggcagccccggcaagccgccggccgtgtcctcg ctggcctcgggccactcgagagcccacggcggcgagcaccacggcaaagaccaccagcgc tccaagtcgccccgggaccccgagcccagctgggactctccctcgcgcgtgccctcgttc gccggcgggcagcactcgaaccagtccttcccgccctcgctgatgtccaagtccagctcc atgttacagaaacccaccgcctacgtcaggccgatggacgggcaggaatccacggaacca aagttatcctcggaacactacggcggccagagccacggcggcggcgtcaacgagctgaaa cccagcagcaaagcgcacctgaccaagctgaaaatcccttctcagcccctggatgcatca gcctctggtgaggtgagctgcgtggatgaaatcctcaaagagatgacccactcctggcct cctccactcactgccatccacaccccctgcaaaactgaaccctccaaattccccttccca acaaaggagtctcagcagtccagttttggcactggagaacagaaacgatacaatccctca tccaaagcatccaatggccatcaatccaaatcatgtgaatcgaaccagacagatatgttg aaagatgacttaaaacttagcagtagcgaagacagcgatggagagcaggactgcgataag acggtgccaaggagcacacctggaagtaattctgagccttcccagcacaacagtgaagga gcagataactccagggatgactcgagcagccacagcggctccgagagcagctccggctcc gactcggagagcgagagcagctccagcgacagcgaggccaacgagccgtcccagagcgca tcccccgagccagagccaccgcccacaaacaagtggcaactggacaactggttgaacaaa gttaattcccataaagtgtcaccagcttcttccgtggacagcaatatcccttcttcccaa ggctacaagaaagagggacgggatcagggtacagggagtgggtacactgatcaaggtgga tccaaggactccatttcttctacaccagggagagattccaaacccacccagaagggctcg gagagcggtcgtgggaggcagaaatcacctgcccagagcgacagctcgactcagaggagg actgtagggaaaaaacagcccaagaaggcagaaaagacatctgtggaagagcccagagga ggtcttaaaatagaaagtgaaaccccagtagacatggcaacaaacatcccttcaaacagg cacaaggcagccaccaaaggctccaggaaacccaatataaagaaggagcccaagtcttcc cctcgacctacaacagagaaaaagaaatacaaggcttcaagcaaatctgcccagaaatcc agggaattcatcgaaacagatacctcatcctctgattcagatgaaaatgagagtctgcct ccttcctcacaaacacccaaatactctgagagcaataggactcctgttaaatcttccatg gaggaggatgacggcttttttcggcaaagaatgttctctcctatggaagagaaagagctt ctgtccccactgagtgatcctgatgaaaggtacccactcattgtgaagattgacctgagc ctcttatccaggattccagggaagccttacaaggacacggacgctgccaaggcggagaag aagagcgctccggagaaacacgcgcgggactcccagaaacagccctcggacaagagctcc actaagggcaagaggaaacacaaacagaacgaggatgaaaacagagccagtgaaagcaag aaaacgaaactggaagaaaaagctccctcaggacacaagaattccagcagtagggagtct tcaaagccaagtgctgttaaagagaaggatttgctgccctcccctgctgccccagccctg cagaaggattccaagcaggaacacggctccaggaagagaacagtcagtcagtcctcatcc ctaaaatccagcagcaacccgggcaaggagagcagcagtggcagcaagagcagctcctct tccaagcagaagaagacagaggggaaggggtccagcagtgccaaggaagccaaggaaaag atcctgaacaattcctccagctgccctcctgcctctgctcaggccacggaaggtgcgaag tcgaggagagcaaagctcgtttttgatgataggacttactcagctgatcattacttgcag gaagcaaagaagctgaaacataatgcagatgctttgtcggacaggttcgagaaggccgtg tactacctggatgctgtcgtgtccttcattgagtgtgggaatgcattggagaaaaacgct caggaatccaagtccccgttccctatgtattcagaaactgtggaattaatcaaatacact atgaaactgaagaattacttggccccggatgccacggctgcagacaaaaggctggcagtg ctttgccttcggtgccaagctctgctgtacctgaggcttttcaaactgaaaaaggaaagt gcattgaaatactcaaaaaccctgactgaacatctgaagaattgctacaataattctcaa gcgccgtcccctggtatgggaagcaaacctgtggggatgccatctccagtctctccaaag ctgtctccagggaattcaggaaactactcttccggggcagccaacccttcagggagcggg tcctcggtgacgatcccgcagcgcatccatcagatggctgccagctacgtccaggtcacc tccaacttcctctatgccactgaaatctgggaacaagcggaacagctctcgagagagcag aaagagttctttgctgaactggacaaggtgatggggccgctggtgttcaacacgagcatc atgacggagctggtgcggtacacgcgccagggcctgcactggctgcgcctggacgccaag tga

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