Hirundo rustica (Barn swallow): 120759145
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Entry
120759145 CDS
T09369
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04020
Calcium signaling pathway
hrt04510
Focal adhesion
hrt04540
Gap junction
hrt04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120759145 (PDGFRB)
04020 Calcium signaling pathway
120759145 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120759145 (PDGFRB)
04540 Gap junction
120759145 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120759145 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hrt01001
]
120759145 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hrt04090
]
120759145 (PDGFRB)
Enzymes [BR:
hrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120759145 (PDGFRB)
Protein kinases [BR:
hrt01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120759145 (PDGFRB)
CD molecules [BR:
hrt04090
]
Proteins
120759145 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
BACON_2
DUF4452
Motif
Other DBs
NCBI-GeneID:
120759145
NCBI-ProteinID:
XP_039934057
LinkDB
All DBs
Position
14:6677509..6709090
Genome browser
AA seq
1093 aa
AA seq
DB search
MLRPALKTCLWLLILTGLLEVTSGDSRLHIEPRDTELVLSLHSTFSLLCYGDRELAWERE
GQPLAASLEHRDGVFVSNLTLRNVTGHHTGEYTCTYSPERAPEPAERRALYIYVPDPSLV
FLPAVTSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPATYDPQQGFKGFFED
KTYFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENVTVMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVHVIERGFVHFHTHLPSTVYAEVHKSRTIQVEVEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNESAEIGVQTNASYHA
ERQLYRVNSTLQLHRVHEPLLLRCTVQNFLGTSSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSRSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGDKARREAELYGNTPKEDHV
HSHLSVSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYNIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPVLNNARLAASSPTSSILYTAVHQNGGENDYI
IPLPDPKPEASCDLPQEASVSRASSMLNEANTSSTISCDSPLGLRQDEEQESDPQPGCQE
PTTGHQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccccgctctcaagacgtgtctctggctcctcatcctcaccggtctgctggag
gtaacgtctggggacagcaggctgcacatcgaacccagagacactgagcttgtcctcagc
ctccacagcaccttctccctgctgtgctatggggacagagagctggcgtgggaacgggag
gggcagcccctcgctgcctctctggagcacagggacggtgtcttcgtcagcaatctcacc
ctcaggaacgtgacaggccatcacaccggggagtacacgtgcacctacagccccgagcgg
gctccagagccagcggagaggagagccctgtacatctacgttccagatccctccctggtt
ttcctccctgcagtcacctctgaagaagtcttcatcttcatcacgggctacacagaggct
gtcatcccatgccgtgtgaccaacccacagatgcaggtcaccctctatgagaagaaggtg
gagaaccccatcccagctacatatgatccacaacagggatttaaaggcttctttgaggat
aagacctatttctgccggacatttgtggatgaccaggaggtggattcagacactttctac
gtctacaggatccaggtgtcgtctgtgaacgtctccatcagcgcagtgcagaccatggtg
cgccagggggaaaatgtcaccgtgatgtgcaccgtgagcggcaacgagctggtcaacttc
aactgggattatccccgcaagcaggcagggaaggctgtggagccagtgactgacttcctg
cctggatccactcatgagatccgctccatcctcatcattcagaatgcagagctggaggac
agtggaacctatgtctgcaacgtttctgagggctaccatgagaaaactgaccggaaggac
atcactgtgcatgtgatcgagcgtggctttgtgcacttccacacgcacctgcccagcacg
gtgtatgccgaggtccacaagagccgcactatccaggtggaagtggaggcttatccccaa
cccagcattgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcgg
gtgaagcaggaagaaggaggattttacaccattcgggcttccaatgaggatgatgagcag
gagctctccttccatctgcagataaatgtgccagctaaagtggtggatctcaaggagaac
agcagtgccagcagtggggagcagactgtgacgtgctctgctgaaggaatgccccagcca
gagatcagctggtctacttgcagcgacatcaaatggtgcagcaccaagggacagcccacg
cggctgctggggaacgagtcagccgagatcggcgtgcagaccaacgcctcgtaccacgcg
gagcggcagctgtaccgcgtcaacagcaccctgcagctgcacagggtgcacgagcccctg
ctcctcaggtgcaccgtgcagaacttcctgggcaccagctcccaggacatcactctggtc
ccacacgccttgccgttcaaggtggtcatcatttctgtcatcctggccttgctggtcctc
actgtgatctccctgatcatcctgatcgtgctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcagtaagctctgatgggcacgagtacatctacgtggatccc
atgcagctcccttacgactccacctgggaggtgcccagggacaagctggtgttaggacgc
actctcggctctggtgcctttggtcgtgtggtggaggcgacagcccatggcctgagccat
tcaaggtccaccatgaaagtggctgtcaaaatgctcaagtccacggcccgcagtagtgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggagggcccatctacatcatcacggagtactgc
cgctacggggacctggtggattacctgcaccgcaacaagcacaccttcctgcagtcctac
ggggacaaggcacggcgagaggcagagctctatgggaacacccccaaggaggaccatgtg
cacagccacctctccgtgtctgtcgagagcgacgggggctacatggacatgagcaaggac
gactccctggactatgtgcccatgtctgacatgaagggtgaagtcaagtacgctgacatc
gagtcctctaactatggcaccccctatgagctggacagctactccccatcagctccggaa
aggacagaccgggtgacgctgataaatgagtctccgctcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcac
cgtgacctggctgccaggaatgtcctcatctgtgaggggaagctggtgaagatctgtgac
tttggcctggcgagggacatcatgagggattccaactatatctccaaaggcagtaccttc
ttgccccttaagtggatggcaccagagagcatcttcaacaacctctacaccaccctgagt
gatgtgtggtcttttgggattcttctttgggagatattcactctaggagggactccatac
cctgagctgcctatgaatgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccatgcctctgatgaaatctacaacatcatgcagaagtgctgggaggagaag
tttgagatcaggccatccttctcacagctggtggtgcttatgggaaacctcctggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccccgct
gttgtccgcacaagacccacgattcctgtgctgaacaacgcccgccttgctgccagctcc
cccaccagcagcatcctctacacagccgtgcaccagaacgggggcgagaatgattacatc
atccctcttcctgaccccaaacctgaggccagctgtgacctccctcaggaggcctccgtc
agccgggccagctctatgctgaacgaggccaacacatcatctaccatatcctgtgacagc
cctctgggcctccggcaggacgaggagcaggaatccgacccacaaccaggctgccaggag
ccaaccacaggacaccaagaggtggaggagagtttcctgtag
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