Hirundo rustica (Barn swallow): 120759243
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Entry
120759243 CDS
T09369
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04137
Mitophagy - animal
hrt04140
Autophagy - animal
hrt04217
Necroptosis
hrt04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120759243 (SQSTM1)
04137 Mitophagy - animal
120759243 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
120759243 (SQSTM1)
04218 Cellular senescence
120759243 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120759243 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120759243 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120759243 (SQSTM1)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Mitophagy
Cargo receptors
120759243 (SQSTM1)
Pexophagy
120759243 (SQSTM1)
Aggrephagy
120759243 (SQSTM1)
Xenophagy
120759243 (SQSTM1)
ER-phagy
ER-phagy recepters
120759243 (SQSTM1)
Other autophagy associated proteins
Midbophagy
120759243 (SQSTM1)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
120759243 (SQSTM1)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120759243 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
PA26
Motif
Other DBs
NCBI-GeneID:
120759243
NCBI-ProteinID:
XP_039934279
LinkDB
All DBs
Position
14:complement(6949729..6954167)
Genome browser
AA seq
453 aa
AA seq
DB search
MAALTVKAYLLGKEETAREIRRFSLPPPVRYRAIYDRVAELFQGLLRAGPPPAFRMHYKD
EDGDLIAFSSDEELELALPYVRDGVFRVYIKEKKECKREHRSQCSQEPPRNMVHPNVICD
GCEGPVVGPRFKCTVCPDYDLCGTCEGKGVHKDHNMVMFQSPLLNPFEWLPRGRWLRKMR
HGVPPFPWMHCWGYPGPAAPCQNSEQAEATAAATSAPAAEEASTNSQPQDPNVTFLKNVG
ESVAAFLNPLGIEVDIDVEHGGQRSKVTPTYTKQEKTNAEATSSAPGQNVQTKADQNNKE
SATQVNALAEQIQDMVVDPVPTQMEDGSFHSQEHSESSSSSGGEEDWTHLSSKEVDPSTG
ELQSLQMPDTDGPSSLNVPQDPPQPGPTGLREAALYPHLPPEADPRLIESLSQMLSMGFS
DEGGWLTRLLQTKNCDIGAALDAIHYSKQPPHL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgacggtgaaagcttacctgctgggcaaggaggagacggcccgcgagatc
cgccgcttctcgctgccgccgcccgtccgctaccgggccatctacgaccgcgtcgccgag
ctcttccaggggctgctgcgggccgggccgccgcccgccttccgcatgcactacaaggat
gaagacggggacctgatcgctttttccagcgacgaggagttggagttggcgctgccctac
gtgcgggatggcgtgttccgtgtttatatcaaagagaagaaggagtgcaagcgggagcac
cgctcgcagtgcagccaggagccgccccgcaacatggtgcaccccaatgtcatctgtgat
ggctgtgagggacccgtggtggggcccaggttcaagtgcactgtctgtccagactatgac
ctgtgcggcacctgtgaggggaagggcgtccacaaggaccacaacatggtgatgttccaa
agcccactgcttaatccgtttgagtggcttccccgaggacgctggctccgtaaaatgcgc
catggtgttccacctttcccctggatgcactgctgggggtatcctgggcctgcagctccc
tgccagaactcggagcaagccgaagccactgccgcagccaccagtgcaccggctgcagaa
gaagcttctactaacagccagcctcaggaccccaatgtcaccttcctaaagaatgttggg
gagagtgttgcagcttttctgaaccccctgggtattgaagttgacatcgatgtggaacat
ggaggacagagaagcaaagtgactcccacttacaccaagcaagagaagaccaatgctgag
gcaaccagcagtgctccaggccagaatgttcagaccaaagcagaccagaataataaagag
tctgctacacaagtaaatgcccttgcagaacagatacaagacatggtggtagatcctgtg
cccacacaaatggaagatggcagcttccactcccaggaacacagtgagtctagcagttca
tcggggggtgaggaggactggacccacttatcatccaaagaagtggatccttccacaggt
gaactgcagtctctgcaaatgccagacacagatggtcccagctccctgaatgtgcctcag
gatcctccccagccaggacctacaggactgcgagaagctgctctctacccacacctgccc
ccagaagctgaccctcgcctcatcgagtccctgtcccagatgctctccatgggcttctct
gatgagggtggatggctcactcggctcctgcagaccaagaactgcgacattggggcagcg
ctcgatgccatccactattctaaacagccacctcacttgtag
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