Hirundo rustica (Barn swallow): 120759527
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Entry
120759527 CDS
T09369
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120759527 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120759527 (SMCR8)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
120759527 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
120759527
NCBI-ProteinID:
XP_039934805
LinkDB
All DBs
Position
15:14262214..14271291
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AA seq
933 aa
AA seq
DB search
MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFGGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFHPYEPECALERAEVGSDQDPAAPDPAEPGETHLY
THVPSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQ
ISRALLKQQTVTNFLFENVSFLDEKPPEKQYRGCQGLGEDAVDEKCSEESLAPKVVISLG
SYKSSVECVPIKMEQEMEDSEEPKMSESVMSEHQENLDYLDADIKGSISSGESIEVLGTE
KSGSGLTKSESQASLPVMPSPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYADDDEGGLRFTPRANPGLDDGQGDASKQESLVQVDAACCIGKESPNFLEPLP
ELGQKPCEEDGVVRIPPQPYRPAEQGLRGGFPSSQDGLSGGLLPYELDSRYLSGSREVSK
SSLDECSDSTSYISSAASTCSDRTPSPAHLGGAAGERHRKRAGQNALRFIRQYPFAHPAI
YSLLSGRTLVVLGEDEAMVKKLVTALSIFVPNCGAYAKPVRHWVTSALHLVDFQKWKLIG
LQRAVSPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGAVVARLADHRTQIKRGSTYY
MHVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVVNRRMNFLKLQLGLANEDIKIVQY
LAELLKLRYIQEPGQGGNPLLRFDYVPSFLYKI
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgccgctgttccccttcggcggccag
ggcgccaacccctgggccaaggtcgccggctccaagttcacccgggacttcatcctcatc
tccgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgcggatcatgtctgtggattaccag
gcatccttcgtggggcaccctcccggctctgcctacccaaagctgaactttgtggaggat
tccaaggtagtgctgggggactccaaggaaggggcttttgcctacgtgcaccacttgacc
ctgtatgacctggaagccaggggctttgtgaggcccttctgcatggcctatatttctgct
gacgagcacaaaatcatgcagcagtttcaggaactctccaccgagttctccaaagcctcc
gaatgcctgaagacggggaaccggaaagcttttgccaacgagctggaaaagaaactgaaa
gatcttgactacaccaggaccgtcctgcacaacgagactgagcagcagaagaaagccaac
gacaagggctattacacaacccaggccattgagaaggccaacgagctggccagtgtggaa
aaatcgatcatcgagcaccaagacctgctgaggcaaatccggtcgtatccctacaggaag
ctgaaggactctgaattccacccctacgagccagagtgtgccctggagcgggctgaggtg
ggcagcgatcaggacccggctgcccccgaccccgctgagcccggtgaaactcacctttac
acccacgtgccatcctacacccccaaactcatcaaagccaagtctgccaagtgctttgac
aagaagctgaagacactggaggaactctgtgatgtttattttttcacccagacccttgac
cagttgcaccatatcgagaggacttttcgaggtgatgtgtgttacctcctgacagagcag
atcagccgggctctcctaaagcagcagactgtcaccaacttcctcttcgagaacgtgtct
ttcctggatgaaaaacctcctgaaaaacagtacagaggctgccaggggctcggcgaagat
gccgtagatgaaaagtgttcggaagagtcccttgctcctaaagtggtcatcagcctgggc
tcctacaaatccagcgtggagtgcgtgcccatcaagatggagcaggaaatggaggactcc
gaagagcccaaaatgtccgagtccgtgatgtctgagcaccaggagaacctggactatctg
gatgctgatatcaaaggcagcatcagcagcggggagagcatcgaggtgctgggaacggag
aagtcgggctccgggctgacaaaatcggagagccaggccagcctgcccgtcatgcccagc
ccccaggcgggccggagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgag
gtgctcagcacgtgtccctccgagtccctcatcccagaggatttcaaagcgagctaccca
agtgccattaacgaggagccctacgcggatgacgacgagggaggccttcgcttcaccccc
agagcgaacccgggcctcgacgatggccagggcgacgcctcgaagcaggaaagcttagtg
caggtggacgctgcctgttgtatcggcaaggagagccccaacttcctggagcccctgccc
gagctggggcagaaaccgtgcgaggaggacggggtggtgcggatccccccgcagccgtac
cggccggccgagcagggcctgcgcgggggcttcccctcctcccaggacggcctctcgggg
gggctcctgccctacgagctcgactctcgctacctttcgggcagcagggaggtgagtaag
agcagcctggacgagtgctcggactccacgagctacatcagcagcgccgcctccacgtgc
tccgacaggaccccgtccccggcccacctgggtggcgcggccggggagaggcacaggaag
agggcggggcagaacgcgctgcgcttcatccgccagtaccccttcgcccaccctgccatc
tactccctgctcagcgggaggaccctggtggtgctgggggaggacgaggccatggtcaag
aagctcgtgacggcgctctccatcttcgtgcccaactgcggcgcctacgccaagcccgtg
aggcactgggtcacctccgcgctgcacttggtggatttccagaagtggaagttgattgga
ctccagagggcggtgtcccctgccggggtgaacgtgctgcacgcgctgagcaggtacagc
cgctacctgagcatcctggacgccgacagcaagactctgcgctgccccctctacaagggc
gccgtggtggcccggctggccgaccaccgcacgcagatcaagcgtggcagcacctactac
atgcacgtccaaagcatcctcacccagctgtgttctaaagccttcctcttcaccttctgc
caccacttgcaccttcccatcagcgaaagggaaccggaggaatccgttgtgaaccgcagg
atgaacttcctaaagcttcagctgggcctcgccaacgaagatatcaaaatcgtgcagtac
ttggccgagctgctgaagctgcgctacattcaggaaccggggcagggggggaaccccctg
ctcagatttgactacgttcccagctttttgtacaaaatctag
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