Hirundo rustica (Barn swallow): 120759597
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Entry
120759597 CDS
T09369
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00514
Other types of O-glycan biosynthesis
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120759597 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120759597 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hrt01003
]
120759597 (LFNG)
Enzymes [BR:
hrt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120759597 (LFNG)
Glycosyltransferases [BR:
hrt01003
]
Glycan extension
O-Glycan
120759597 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120759597
NCBI-ProteinID:
XP_039934963
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Position
15:12104528..12115676
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AA seq
367 aa
AA seq
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MLKSCGRKLLLSLVGSMFTCLLVLMVEPPGRPGLARGEAGGAQRALQSLGAAAAVAPPAA
QGPPGLRSFADYFGRLSRARRELPPAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLEL
LLDTWISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESG
RKWFCHVDDDNYVNVRMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWF
ATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFH
SHLENLHQVPKSEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPW
CPTNMVY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaggaagctgctcctgtccctcgtgggctccatgttcacctgc
ctcctggtgctcatggtggagccgccggggaggccggggctggcccggggggaggccggc
ggggcgcagcgggcgctgcagagcctgggggcggcggcggccgtggctcccccggcggct
caggggccgcccgggctccgcagcttcgccgattacttcgggcggctgagccgagcgcgg
cgggagctgccccctgccccgccgagccccccgcggccgccggccgaggacatctccccc
cgcgatgtcttcatcgccgtcaagaccaccaagaagttccacaaggcgcggctagagctg
ctgctcgacacctggatctcccgcaaccgcgacatgaccttcatcttcactgacggggag
gatgaggagctgaagaagcaagcacgaaacgtcatcaacaccaactgctcggctgcccac
agccgccaggccctgtcctgcaagatggccgtggagtacgacaagttcatcgagtctggc
agaaagtggttctgccacgtggacgatgacaactacgtgaacgtgcggatgctggtgaag
ctgctctccagctacccccacacacaggacatctacatcgggaagcccagcctggaccgg
cccatccaggctacggagaggatcagcgagaacaagatgcatcctgtgcatttctggttc
gccacgggtggagcagggttctgtatcagccgagggctggcactgaagatgagcccttgg
gccagcgggggtcacttcatgagcactgcagagaagatccgcctgcccgacgactgcacc
atcggctacatcatcgagtccgtgctgggcgtgaagctcatccggagcaacctcttccac
tcccacctggagaacctccaccaggtgcccaagtcggagatccacaaacaggtgacactg
agctacggcatgttcgaaaacaagcgcaactccatccacatgaagggagctttctctgtc
gaggaggatccatccaggttccgctccgtgcactgcctgctgtacccagacacgccatgg
tgccccaccaacatggtttactag
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