Hirundo rustica (Barn swallow): 120759649
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Entry
120759649 CDS
T09369
Symbol
NTHL1
Name
(RefSeq) endonuclease III-like protein 1 isoform X2
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120759649 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120759649 (NTHL1)
Enzymes [BR:
hrt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120759649 (NTHL1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120759649 (NTHL1)
Prokaryotic type
120759649 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
120759649
NCBI-ProteinID:
XP_039935072
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All DBs
Position
15:complement(15257717..15263386)
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AA seq
237 aa
AA seq
DB search
MKNHWAFVLVHPVGLLRMPSSRKALSSPLWLSTGAFGVRSQHTELPPALSQVMRYQVLLA
LMLSSQTKDQVTSAAMLRLRRRGLTVDSVLQMDDETLGQIIYPVGFWRNKVKYIKQTTAI
LKQKYGGDIPSTVEELVQLPGVGPKMAHLAMHIAWDSVAGIAVDTHVHRISNRLQWVKKE
TKYPEETRVALEEWLPRDLWKEINWLLVGFGQQTCLPVNPRCSQCLNQDICPAAKRL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcattgggcgtttgtacttgtgcatcctgtgggtctcctgagaatgccatcc
tcacgaaaagctttgtccagccctttgtggctcagcactggcgcctttggagtgagatcc
cagcacacagagctgccccctgccctctcacaggtcatgcgctaccaggtgctgctggcc
ctgatgctgtccagccagaccaaggaccaggtgacgagtgctgccatgctgcgcctgcgc
cggcgcggcctcaccgtggacagcgtgctgcagatggacgacgagaccctgggacagatc
atttatcccgtgggattctggaggaacaaggtgaagtacatcaagcagaccacagccatc
ctgaagcagaagtacgggggtgacatccccagcaccgtggaggagctggtgcagctgcca
ggagttgggcccaaaatggcccatttggccatgcacattgcctgggacagcgtggctggg
atagctgtggacacccacgtgcacaggatctcgaacaggctccagtgggtgaagaaggag
accaagtaccccgaggagactcgggtggcactggaggagtggctgcccagggacctgtgg
aaggagataaactggctcctggtgggctttgggcagcagacctgcctgcctgtgaaccct
cgctgcagccagtgcctcaaccaagacatttgcccggctgccaagagactctga
DBGET
integrated database retrieval system
