Hirundo rustica (Barn swallow): 120760850
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Entry
120760850 CDS
T09369
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00514
Other types of O-glycan biosynthesis
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120760850 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120760850 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hrt01003
]
120760850 (RFNG)
Enzymes [BR:
hrt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120760850 (RFNG)
Glycosyltransferases [BR:
hrt01003
]
Glycan extension
O-Glycan
120760850 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120760850
NCBI-ProteinID:
XP_039937447
UniProt:
A0A7L4EYH0
LinkDB
All DBs
Position
18:complement(11920464..11928300)
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AA seq
368 aa
AA seq
DB search
MNGPCLGLRRAGVLLSLGIAALLLLLLPRGQRSAVPRPPPAAGPSAPPPHRAGPEGSAGA
PGGGAGAGGRGGGLAGSPQLARRDRLGAASSSARENLELKDIFIAVKTTRKYHKSRLDLL
LQTWISQARGQTFIFTDWEDQELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESG
QKWFCHVDDDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFW
FATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLF
HSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTI
WCPAKKMS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcccttgcctggggctgcgcagggccggggtcctgctgtccctgggcatcgcc
gctctcctgctgttgctgctgccgcgggggcagcgttccgccgtgccccgcccgccgccc
gccgccgggcccagcgcgcccccgccgcaccgcgcgggcccggaaggctctgccggagcg
ccgggcggcggggccggggccggcggccgtggcggaggcctcgcgggtagcccgcagctt
gcgcggagggaccgtctcggggctgccagcagctcggccagggagaacctagagctgaag
gacatctttattgcggtgaagaccacgaggaagtaccataagagccggctggacttgctc
ctccaaacctggatctcccaagcgaggggacagacgtttatattcacggactgggaggat
caggaactacgcctgaaagcaggggatcatatgatcaacaccaactgttccgctgtccat
acccggcaagctctctgttgcaagatgtctgtggaatatgataaattcctggaatctggg
caaaaatggttttgccatgtggacgatgacaactatgtgaaccctcggactctcctacat
ctcttgtctgcattctcacacagccaggatgtctacgtggggcgaccgagtctggaccat
cccattgaagcagctgaccatgtgcaaagtgatggatcaaagacaactgtgaaattctgg
tttgccacaggtggtgctgggttctgtatcagccgaggtcttgccctgaagatgagtccc
tgggccagcctgggcaatttcattagtactgcagaaagagtgcgtcttcccgatgactgc
actattggctacatcattgaggggctgctggaggtaaagctgctacacagcccgttgttc
cattcccacctggaaaatctgcagagactgcaaggcgaatctgtgctgcagcaggtaacc
ctgagttatggcgaccctgagaacaaacacaatgtcgtgagtgtgggaggagtgtttggc
cttcagcaggatccaacccgatttaaatctgtccattgtctgctttatcctgacactatt
tggtgccctgctaagaagatgtcataa
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integrated database retrieval system
