Hirundo rustica (Barn swallow): 120761764
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Entry
120761764 CDS
T09369
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04010
MAPK signaling pathway
hrt04137
Mitophagy - animal
hrt04141
Protein processing in endoplasmic reticulum
hrt04210
Apoptosis
hrt04217
Necroptosis
hrt04621
NOD-like receptor signaling pathway
hrt04622
RIG-I-like receptor signaling pathway
hrt04920
Adipocytokine signaling pathway
hrt05132
Salmonella infection
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120761764 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120761764 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120761764 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
120761764 (TRAF2)
04217 Necroptosis
120761764 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120761764 (TRAF2)
04622 RIG-I-like receptor signaling pathway
120761764 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120761764 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120761764 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
120761764 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761764 (TRAF2)
04121 Ubiquitin system [BR:
hrt04121
]
120761764 (TRAF2)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120761764 (TRAF2)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120761764 (TRAF2)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
120761764 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
Sina_ZnF
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
zf_C2HC_14
zf-TRAF_2
zf-RING_10
zf-C3HC4_5
Thioredoxin_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120761764
NCBI-ProteinID:
XP_039939335
LinkDB
All DBs
Position
20:10828545..10852302
Genome browser
AA seq
489 aa
AA seq
DB search
MALCAQSLEVQPELFVHMAAANSSPPGSLDLNQPGFAKEILGTKLEVKYLCSDCKNILRR
PFQAQCGHRYCSYCLKKIISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESL
PAVCINSGCTWKGTIKEYEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRF
EAVGCAEVVENEKLLEHERKCLAEHLYMLLSSVLSLKTHTGDLKPLPVLSSSQNSSPLLA
ANALCSESELSRSLELLGRCEALERKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQE
KIETLSNKVRQLERSIGLKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGR
SPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTL
MLLDQNNREHIIDAFRPDVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFI
KAIVDLTGL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcactctgtgcgcagtctctggaggtacagccagaacttttcgttcacatggcagca
gcaaactcttctccacctggttctttggatctaaaccagcctgggtttgcaaaggagatc
ctgggaactaaactggaggtgaaatacctgtgctccgattgcaagaacatcctgaggcgg
ccgttccaggcacagtgtggccatcgctactgttcctattgcctgaaaaaaatcatcagt
gctggacctcagaagtgtgctagctgtatccaggaaggaatatatgaagaaggaatttct
attttggaaacaagctcggctttcccagacaacgcggcgcggcgggaagtggagagtctg
cctgctgtctgcatcaacagtggctgcacctggaagggaaccatcaaagagtacgaggct
catgatgaagtctgccctgaattcccgctgacttgtgaaggctgtgggaagaagattccc
agggagaagtttcgggaccatgtgaagacgtgtggtagatccaaagtgccttgccggttc
gaggctgtgggctgtgctgaggtggtggaaaatgaaaaactcctggaacatgaaaggaag
tgtttggcagagcatctctacatgctgctgagctctgtgctcagcctcaagactcatact
ggggacctgaaaccccttcctgtcctttcctcatcacaaaacagctccccactgctggca
gcaaacgcactgtgctcggagtcggagctctcccggtccctggaactcttgggaaggtgt
gaggcccttgagaggaaaacagtgacctttgagaacattgtctgtgtgctcaaccgggag
gtggagagagtatccctgacagctgaagcctacagccgccagcaccggctggaccaggag
aaaatcgaaacgctgagcaacaaggtccgacagctggagaggagcattgggctcaaggac
ctggccatggctgagatggaggagaagatccgcaacatggaggcttccacctacgacggg
gttttcatctggaagataacggagtttgcccggaagcgtcaggaggcaataacaggccgc
tctcctgccatcttctctccagctttctacaccagcaagtacggctacaagatgtgtctg
cgcgtgtacctgaatggggacggcaccggccgtgggacccacctgtccttgttttttgtg
gtgatgaagggacccaacgacgcgctgctgcggtggcccttcaaccagaaggtcaccctg
atgcttctggaccagaataaccgggagcacatcatcgatgccttccgccctgacgtgacg
tcctcatccttccagcgccccgtcacagagatgaacatcgccagtggctgccccctcttc
tgccccgtgtccgtcatggaagccaagaactcctacgtgcgtgatgatgccatctttatt
aaagccatcgttgatctcacgggcctctaa
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