Hirundo rustica (Barn swallow): 120762743
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Entry
120762743 CDS
T09369
Symbol
DSEL
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hrt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120762743 (DSEL)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
120762743 (DSEL)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
DUF4962
Sulfotransfer_3
TPX2
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120762743
NCBI-ProteinID:
XP_039941401
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Position
1:complement(56134206..56140562)
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AA seq
1216 aa
AA seq
DB search
MALMFTGHTLFLALMVFDVFTSEESVSNYSDWVTFIENVDQYEKQQLEGLSAEQKLKRSV
LRPSLYFDAEDVQALRQKARTSHLHLFRAIRSAVMVMLSNPLYYLPPPKHIDFAAKWNEI
YGNNLPPLAFYCLLCPEDKAAFDFALEYMDRMAGYKNWLVENAPGDEVPLGHSLTGFATA
FDFLYNSLGDERKQKYLEKIWSVSEEMYEYSKVRSWGKQILHNHQATNMLALLIGALVAG
VDKGSQANIWKHTVVDVMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFGI
NNLENNWLKMHFWFYYATLLPGFQRTVGVADSNYNWFYGPESQLVFLDKFIMKNGAGNWL
AQQIRKHRPKDGPMVPSTAQRWSTLHTEFIWYAAEITPQPPPGYGTAKMHVFPNWGVVTY
GAGLPNSQTNTFVSFKSGKLGGRAVYDIVHFQPYRWIDGWRSFNPGHEHPDQNSFTFAPN
GQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNQPWEGQLGECAQWLKWIGDEVGDSTGEI
VTASQAGDMMFVSGEAVSAYTSAMKLKSVYRVLLLLNSQTLLVVDHIEKEEDSPVNSVSA
FFHNLDIDFKYIPYKFKNKYNGAMMDVWDAHYKMFWFDHRGSSPVARIQEAEQAAEFKKR
WTQFVNVTFPMKNTLTRIVYLFYGPYVNVSNCRLMDNAKSGFQISLSVNNTENTVSVVTE
YQNLKARFDYLGFGGFAKVVHENKVTKFGFGTESVKKDMKNNRVVFPFGFKVNIIAGLIL
GVSLVILAFQWRFYISFGKMLRWILILIVILWLIELVDVWSMCTQPICAKWSSDMTRLER
DKGNKAKQLEGNPVVLPDVIITSLPTSGAEILKQLFFNTSDFLYIRIPTPYLAIPETEFE
IDSFVDPCEWKVSDVQNGNFRLIQGWLQSLVRDTKLHLQNIHLYEASRSKIVQHSPLSKD
KMKKSKKRESLLEQRSRARGSQEKDAEYIRELRRHLVYYPNARPVLSLSSGSWTLKLPFF
QEILGPSMRALYVVRDPRAWVYSMLYKNKPSLYSLKNIPQRLAAMFKGENGKEKCGINEG
YASEFESLRNEISNSNSNAISVLSYLWLANTAAAMRINRDLLPTNYQLVKFEDIVTFPQK
TAETIFAFLGIPLPPASLNQILFATSTSLFYLPYEGEISPSSIHAWKQNMPHEEIRQIED
ICCSLMDHLGYPKFME
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggctctgatgttcacggggcatactctgtttctagcattaatggtgtttgatgtcttc
acttctgaagaatctgtaagcaattactctgattgggtgactttcatagaaaatgtagat
caatatgaaaaacagcaacttgaaggtcttagtgctgagcagaagctgaaaagatcagtt
cttcgtccaagcttgtattttgatgctgaggatgttcaggccctgaggcagaaggctcgt
acgagccatttgcatctcttcagagccatcagaagtgcggtgatggttatgctgtccaac
cctttatactacctacctccacccaagcacattgattttgcagccaagtggaatgagatt
tatggtaacaacctgccacctctagcgttctactgtttgctgtgtcccgaagataaagct
gcatttgattttgccctagaatatatggatagaatggctggttacaaaaactggttggtt
gagaatgcacctggagatgaagtaccactcggccactccctaacaggatttgccactgct
tttgacttcttgtataattcattgggagatgagagaaagcaaaaatacctggagaagata
tggtctgtaagtgaggaaatgtatgagtactccaaggttcgttcctggggaaagcagatt
ctccataatcaccaagcaaccaatatgcttgctttgcttattggggctttagtggctgga
gtggacaaaggctctcaggcaaatatttggaaacacactgttgttgatgtgatggagaaa
acaatgtttctgctcaatcatattgtagatgggtctctggatgagggagtagcttacggg
agttacacagccaagtcagtaacccagtatgttttcctggcccagcgccacttcggtatt
aacaacttggagaataactggctgaaaatgcacttttggttttactatgccaccctattg
ccaggcttccagaggactgtgggtgttgcagattctaattacaactggttttatggtcct
gagagccaactggttttcttggataagttcatcatgaagaatggagctggtaactggctg
gcacagcaaattagaaaacatagacccaaggatgggccaatggtgccatccactgcacag
aggtggagcacgttacatactgaatttatatggtatgctgctgaaatcactcctcagccg
cctcctggctatggtactgctaaaatgcatgtgtttcctaactggggagttgttacttac
ggggctggattgccaaacagtcagacaaacacctttgtatccttcaagtctgggaaactc
ggtggacgtgctgtctatgatatcgttcactttcaaccctatagatggattgatgggtgg
agaagtttcaatccggggcatgaacatcccgatcagaactccttcacttttgctcccaat
ggacaggtgtttgtatctgaggctctttatggacctaaactcagccacctgaacaatgtc
ttggtgtttgctccatctcctacaagccagtgcaaccagccttgggagggacagcttggt
gagtgtgcccagtggctgaagtggattggtgacgaggttggagactcaactggagaaatt
gtaacagcctcccaggctggtgacatgatgtttgtgagtggtgaggcagtatctgcttac
acatcagcaatgaaactgaaaagtgtgtatcgtgtcttgctgcttttaaattctcagaca
ttgttagtagttgaccatatcgagaaggaggaagactctcctgttaattctgtcagtgcc
ttttttcataatcttgacattgattttaaatacataccctataagtttaagaacaagtac
aatggagctatgatggatgtgtgggatgcccactacaagatgttttggtttgatcatcgt
gggagtagtcctgttgctaggatacaggaggctgaacaagctgctgaattcaaaaagcga
tggactcagtttgtaaatgttacctttccaatgaaaaacacacttacaaggattgtttac
cttttctatggcccgtatgtcaatgtttctaactgtagactcatggataatgcaaaatct
ggatttcagatttcactcagtgtcaacaacactgaaaataccgtctctgttgtgactgag
tatcagaatttaaaggcaaggtttgattacttggggtttggtggttttgctaaagtagtt
catgaaaataaagtgaccaagtttggttttggtactgaatctgtgaaaaaagatatgaaa
aataatagggtagttttcccatttggattcaaagtgaacataattgcagggttaattttg
ggtgtcagtttggtcatactggcttttcagtggcggttttacatatcctttggtaaaatg
ttgcgttggatcctgatactgattgtcatactgtggcttattgaattggtggatgtgtgg
agcatgtgtactcagcccatctgtgcaaagtggagcagtgacatgacaaggctagaacgt
gataagggcaataaagccaaacaattagaaggaaaccctgttgttttgccagatgttatc
attacttcacttcccacttctggtgcagaaattttaaaacagctgtttttcaataccagt
gactttttatacatcaggatacctacaccctatcttgcaattcctgagactgaatttgaa
attgactcatttgttgatccatgtgaatggaaggtttctgatgtccagaatggtaatttt
cgtcttatccaagggtggctacagtctctagttcgagacacaaagttgcatttgcaaaac
attcatttatatgaagctagcagaagtaaaattgttcagcattctcctttaagcaaagac
aaaatgaaaaagtccaagaagagagaatccctgttagagcaaagaagcagggcaagaggg
agtcaagaaaaagatgctgaatatattagggaactaagaaggcatctcgtctactatcca
aatgcacgacctgtgcttagtttaagcagtgggagctggacattaaagcttcccttcttt
caggaaatcttaggaccatcaatgagagcattatatgtagtgagggacccacgggcatgg
gtctattcaatgttgtacaaaaataagccaagcctttactccttgaaaaatattccacaa
cgcttggctgcgatgtttaaaggggagaatggtaaagaaaaatgtggtataaatgaaggc
tatgcctctgagtttgaatcactaagaaatgaaatttcaaattctaattcaaatgctatt
tctgtgttgtcttatttatggctagcaaacacagcagcagcaatgagaattaacagggac
ttgctgccaacaaattatcagctggtcaagtttgaagatattgtgacctttcctcagaag
acggctgaaacaatttttgcctttcttggtattcctcttcctcctgctagcttaaaccaa
atattgtttgccacctccaccagtcttttctatcttccttatgaaggggaaatttcacca
agtagcattcatgcctggaaacaaaacatgccccatgaagagattcgacagattgaagat
atctgttgttcactgatggaccacttaggatacccaaagtttatggaataa
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