Hirundo rustica (Barn swallow): 120762853
Help
Entry
120762853 CDS
T09369
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120762853 (PKP1)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120762853 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Mo25
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
120762853
NCBI-ProteinID:
XP_039941616
LinkDB
All DBs
Position
24:683462..728046
Genome browser
AA seq
733 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTAWSSYYAKTQTGNNKWGYPLYNGTLKRDVESRRYSSYS
QMEGWASRAHSKAVCSPRAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKAHGGGRAEHKA
TLNRQSIYSSCSTQQGNSRTSKKMPARALSCPSSNKPDVVYAQPMMSCKQDGVYGQAQSS
SRICGDEIDGGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAKL
VELLRSQNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLTG
LLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLRN
LSSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPNK
YTQLNHMARSVYMDKTLTGCFNSRSGKLENDEYGVPLPEEDFKPKGPSWLYHSDAIRTYL
SLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSNSSEVVR
SGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTSSYGEIMTSACYTLRNLIMSNP
HLGKSYLSSNLINNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMGS
LAGTTFRTLSSRF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgctccactccccgctgaaaacggcgctggcctacgagtgcttccaggaccaggccagc
tctacactggcgctgccctcggaccacaagctgaaaaccaagggcacgggcaagcagcgg
gtccaggagcaggtgatgatgacggtcaagaggcagaagcaaaagtcgtcggtgtcatca
agcgtgggccactcgaatcgaggttccatgtatgatggtttagctgatggttatggctac
gggacagcctggagcagctactacgccaaaacccagacagggaacaacaagtggggatac
ccgctgtacaacgggacgctgaagcgggacgtggagagccggcgctacagctcctacagc
cagatggagggctgggccagccgggcacacagcaaggccgtgtgcagcccccgggccggc
agtgactactgcttcgtgcagaacatcaagagcagccgcagcgagcccgacctctactgc
gagccgccccgcggaaccctgcgcaaggcccacggcggcggccgggccgagcacaaggcc
accctcaaccgccagagcatctacagcagctgcagcacccagcaggggaacagcaggacc
agtaaaaaaatgccggcgagggccctgtcctgcccctcaagcaacaagcccgacgtggtc
tatgcacagcccatgatgagctgcaagcaggacggggtctatggccaggcccagtccagc
tccaggatctgcggtgacgagattgatggtggcaccatgaccatccagaaggccatccag
ctcctgtgctcctctgatgacaagtaccaggccatgggggcttactacctgcagcacacc
tgcttccaggatgagtctgccaagcaagaggtctatcggctggggggcattgccaagctc
gtggagctgctccgcagccagaaccagaatgtgcagcgggcggcggctggagctctccgg
aacctggtgttcaagaaccccaccaacaagatcgaaacccggcggcagaacgggatcagg
gagtgtgtgagcctcctccgtaggacagggaacactgaaattcagaaacagctcacagga
ctgctctggaacctctcctccactgatgaactaaaagaagagttgatacaggaggctctg
cccgtgctgacagactgtgttatcatcccattctcgggctggtctgatggcagctgcaac
aggacacgagaaattatcgacccagaagtgttcttcaatgccacagggtgtttgaggaac
ctgagctctgcagacatggggcgccagaccatgaggaattaccctggcctgatcgactct
gtcatgacttatgcccagaactgcgtggcctccaaccgccctgacgacaagtctgtggag
aactgcatctgcatcttgcacaacctctcctaccgcctggatgctgaagttcccaacaaa
tacactcagctcaaccacatggcccggagcgtttacatggacaaaactctcacaggctgc
ttcaacagcaggagtgggaaactggagaatgatgagtatggggtcccccttcctgaggag
gatttcaaacccaaaggccccagctggctgtaccactcagatgccatccgcacctacctg
tccctgatggatcagagcaagaaggatgccaccctggaagcttgtgctggagctctgcag
aacctcactgcgagccgagggctgatgtccaatgccatgagccagttgattgggctgaag
gagaaggggttgccccgcatcgctcggctgctccagtccaacagctccgaggtcgtcagg
tctggggcctctctgctgagcaacatgtccaggcaccctgtgctccacaaaaccatggct
caccaggtgctcccagatgtatcccgtctcctgtcgttccagtctggaaacaccagcagc
tatggggagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaacccc
cacctgggaaagtcttacctgtccagcaacttgataaataatgtagtgagcctgtgccgg
aatggctcctgtccaaaagcggctgaagctgctcggcttctcctgacagacctttggtcc
aacagagagctccagagtgtgctcaagcagcaagggtttgataagaatatgatgggatct
ttagctggaacgaccttcaggaccctctcttccagattttag
DBGET
integrated database retrieval system
