Hirundo rustica (Barn swallow): 120763696
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Entry
120763696 CDS
T09369
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04140
Autophagy - animal
hrt05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120763696 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120763696 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120763696 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120763696 (PLEKHM1)
Membrane trafficking [BR:
hrt04131
]
SNARE
SNARE associated proteins
Others
120763696 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
120763696 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_RRN7
Prok-RING_1
C1_1
Motif
Other DBs
NCBI-GeneID:
120763696
NCBI-ProteinID:
XP_039943131
LinkDB
All DBs
Position
27:896021..916961
Genome browser
AA seq
1034 aa
AA seq
DB search
MHSSHPEDPKEAIQLIKKQLVNAIKALQKQYVSSDAVVTSDDGNANTLCSALEAVFVHGL
KAKHIKAESGGKGKKSGGRAPLPQPVFWGLLKSITHRNIVSELEQLMFINTDVGRCRAWL
RLALNDGLMECYLKLLLQDRARLHEYYQAPALLLDTEECEFLLCYLQGLSSLTFELSYKS
AVLNEWTVTPLSLSGLCPVSELLEPLTSSASEPHRKASLGSISQSSGSDEIEIQAPVLPI
GKAGSKIKLTSSSLSLNTTSSSQLSSSLGSDSLPPVPCARSPERGEEPLSCDSDLGTATA
EDLDRSLQEVLSEFSKARPSSDAPEGQLLPSVLGCSPWPPPGPPVLPTCPAPTHGTHQEP
PPSRDISAPAGHPAPPGPGDGDAGSTSGIAAPRDGAGGAERAGSEGSQAVRSPTAQHLLS
PLPGCPKSWISEDDFYRPSPGESSRSTADTNGFGPEGDSEGPAPGLISALDLERLSVPSS
DTGKHKMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLEL
RLFLDHEERICVETYSLLRCESLALTHSDGRFELVFLGKKLFLRAPSQDEAEDWLDRIRE
ALRKCRPQLEEEDWETLEYSEDGGEAQPVKGDSGALQYSDLPRNSLDWTPAPEAELDAIK
EAVLYMDVDKTWVPFIFSLSLETLKCFKIRNSDKILSNSYGIETIQDILPDTSLGGPSFF
KVITSKAVLKLQAENAEEAASWRELVREVLMSYLEGAEEALTLGGSLDGHSQVVLKNIVK
ENSFLLQYLVAIPTEKGLDSQSFICAGCSRQIGFSFARPKLCAFSGLYYCDSCHRDEETV
IPSRLIHNWDLTKRGVCKQALKFLRQIRNQPLIDLKLVNESLYEHVERMGRILRSREQLK
LLGDYLIMCRSGALKELSKRLDHRHYLLECPHKYSVADLSQIADSVFETFLQSLLQFASH
HVYSCDLCTQRGFICQICNSSDIIFPFEFDTTTRCSECKTVFHRDCHARVPSCPRCERRQ
RYQRQLEAGTEPSP
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagccaccccgaggatcccaaggaagccatccagctgatcaagaagcaactg
gtgaatgccatcaaggctctgcagaagcagtacgtgagctcggacgccgtggtcaccagt
gatgacggcaacgccaacacgctctgcagcgccctggaggcggtgtttgtgcacgggctg
aaggcaaagcacatcaaggcagagagtggggggaaagggaagaaatcagggggtcgggcc
ccccttccccagccagtcttttggggcctgctgaagagcatcacacatcgcaatattgtc
tcggagctggagcagctgatgtttatcaacacggacgtggggcgctgccgggcctggctg
cggctggcactgaacgatggcctcatggagtgttacctgaagctgctgctgcaggaccgc
gcccggctgcacgagtactaccaggccccagctctgctgctggacactgaagagtgtgag
tttctgctctgctacttgcagggtttgtcgtccttaaccttcgagctctcctacaagtca
gcagttctgaatgagtggaccgtcaccccgctgtccctgtcgggtctgtgtcccgtgtcc
gagctgctggagcccctcacgtcctcggcctccgagccccacaggaaagcatcgctgggc
tccatctcccagtcctcggggtcggatgagatcgagatccaagcccccgtcctgcccatc
ggcaaagccggcagcaagatcaagctcacgtcgtcctcgctgagcttgaacaccacgagc
tcttctcagctctcgtccagcctgggctctgacagcctccccccggtgccctgtgcccgc
agccccgagcgcggcgaggagccgctgtcctgcgactccgacctgggcacggccaccgcc
gaggacctggacaggtccctgcaggaggtgttgtctgagttcagcaaggccaggccgagc
tcggacgccccggagggacagctgctccccagcgtgctgggctgctccccctggcctccc
ccgggccccccggtgttgcccacctgcccggccccgacccacggcacgcaccaggagcct
ccccccagcagggacatctctgctccggcgggacaccccgcgccccccggccctggggat
ggagatgccggcagcacgtcgggaattgcggcccctcgggatggtgcgggcggagcagag
cgcgctggcagcgaggggagccaggccgtccgcagccccacggcccagcacctgctctct
cccctgccggggtgtccgaagagctggatctcagaagatgatttctacagaccttccccg
ggagagagcagcaggagcacggctgacaccaatggctttgggccagagggggacagcgag
gggccagccccaggcctcatcagtgctctggacttggagaggctctcagtgccatcctcg
gacactgggaagcacaaaatgtccccggagcgggagcagaagggcttcagcgtggtgcac
cgcaggcagatgggcctttccaaccctttccgtgggctgctgaagctgggcagcctggaa
cggcgaggagccatgggcatttggaaggagttttcctgcgagctgtccccgctggagctg
cggctcttcctggaccacgaggagcggatctgcgtggagacctactccctgctgcgctgc
gagtccctggcgctgacccactccgacggccgcttcgagctggttttcttggggaaaaag
ctcttcctccgagccccttcccaggacgaggccgaggactggctggacaggatccgcgag
gcgctgcgcaagtgccggccgcagctggaggaggaggactgggagactctggagtattcc
gaggatggaggcgaagcccagcccgtcaagggcgattccggtgctctccagtacagtgac
ctgcccaggaacagcttggactggactccagctccagaagcagagctggatgccatcaaa
gaggctgttctgtacatggacgtggacaaaacctgggtcccgtttattttttccctttct
ctagaaactctgaagtgctttaaaatcagaaacagtgacaaaattttaagcaacagttac
ggcatagagaccatccaggacatccttccagacacgagcttgggaggaccctccttcttc
aaggtgatcacctccaaggctgtgctgaagctgcaggctgagaacgccgaggaggcggcc
tcgtggcgggagctggtccgagaggtgctcatgtcctacctggagggcgccgaggaggcg
ctgaccctggggggcagcttggacgggcactcccaggtcgtcctgaagaacatcgtgaag
gaaaacagcttcttgttgcagtacctggtggccatccccacggagaagggcctggactca
cagagcttcatctgtgcaggctgctcccggcagatcggcttctccttcgccaggcccaag
ctctgcgccttctccgggctctactactgcgacagctgccaccgggacgaggagaccgtg
atcccctcccgcctcatccacaactgggatctcaccaaacgaggggtgtgcaagcaagcc
ctgaagttcctcaggcagatccgaaaccagccgctgattgacctgaagctggtcaacgag
agcctctacgagcacgtggagaggatggggcggatcctgcgcagccgggagcagctgaag
ctgctgggggattatctcatcatgtgccgcagcggcgccctgaaggagctcagcaagcgg
cttgatcacaggcattatctgctggagtgtccccacaaatacagcgtggctgatctgagc
cagatcgccgacagcgtcttcgagaccttcctgcagtcgctgctgcagtttgcatcccac
cacgtctacagctgcgacctgtgcacccagaggggcttcatctgccagatctgcaacagc
agcgacatcatcttccccttcgagttcgacactaccaccaggtgcagtgaatgcaaaacc
gtcttccaccgggactgccacgcccgggtcccgtcgtgcccgcgctgcgagcggcggcag
cggtaccagcggcagctggaggccggcacagagcccagcccgtag
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