Hirundo rustica (Barn swallow): 120764209
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Entry
120764209 CDS
T09369
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00310
Lysine degradation
hrt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120764209 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120764209 (SETDB1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
120764209 (SETDB1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120764209 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120764209 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
ODAD1_CC
Sld3_STD
Motif
Other DBs
NCBI-GeneID:
120764209
NCBI-ProteinID:
XP_039943961
LinkDB
All DBs
Position
29:1476079..1492901
Genome browser
AA seq
1286 aa
AA seq
DB search
MDSPDIKELQQEVEELGISMEELQEIIDKEVENSEWVRQRKQQLEELEQCMRHKEEEVAH
VDQLIDDAMRAINKCETLAKELYSMMGLQYRESSSEDEAPAAAEVIEIADEEDDDVMSVD
SGWKHIAGSSSPRISRDQSLLREAMAAMRKSARDVAKFMDAVNKKTNLQEAQKDAQPPQE
PPGTAQPVTVPATPGNDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKF
DNKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDRFL
IFFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLEALPMGTVNVSFFPQEDKRCEWIYRGSTRLEPMF
SMKTSTASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGAGPQYKALEQPPAARPAS
PQPVEMECSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPAAGRALPAPQHR
LPSSVPASQPFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPLRSDQYRSRNPL
LIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEMFCL
DPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYIN
TSWEFLVGCDCKDGCRDKSRCACQQLTIQASGCTLGGQINPNSGYQHKRLEECLPTGVYE
CNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDD
FADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDNENTGTEELE
ESNEDSSDDNFCKDESFSTSSVLRSYATRRQTRGQRDHGHSETASKDSGLARPPGHEEPA
AAPPCKLPVSEETSKHKVASWLSSNSMAEGFQDSDGAPCFRAGGEGGEGKAVKMEMAAER
EKGCAGALGDLNGEAKAAKKEEPDEATKMPGLSSLGRRYGYNPCPPKLDGIRRPVGGTVL
LQSRRRSLALPPPLEDVLTLSSSTDTDEEQRAGQPTGQQDSDDIQTISSGSEEEEGEDKK
NQSSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEE
NCYIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDY
NYEVGSVEGKELLCCCGAIDCRGRLL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggattccccggacatcaaagagctgcagcaggaggtggaggagctgggaatctccatg
gaggagctccaggaaatcatcgacaaagaagtggagaattccgagtgggtgaggcagcgc
aagcagcagctggaggagctggagcagtgcatgcggcacaaggaggaggaggtggcccac
gttgaccagctcatcgacgatgccatgagggccatcaacaagtgcgagacgctggccaag
gagctgtattccatgatgggcctgcagtaccgggagagcagctccgaggacgaggcgccg
gcagccgccgaagtgatcgagatcgcggacgaggaggacgacgacgtcatgagcgtggac
tcgggctggaagcacatcgcaggcagcagcagtcccagaatctccagggatcagagtctg
ctgcgggaagcgatggctgccatgaggaaatctgcccgggacgttgcgaaattcatggat
gctgtgaacaagaaaacgaacttgcaagaagcacagaaagatgcacaaccccctcaggaa
cctcctggcactgcccagcccgtcactgtccctgcaacccctggcaatgatctcaacact
gatggggacctcaaagtgggcatgaggattttggggaaaaaaaggaccaagacgtggcac
aaggggacattgattgccatccagacggtcggtgctggcaagaagtacaaagtgaaattc
gacaataaagggaagagtttgctctcgggcaaccacattgcctacgattaccacccgtcc
gccgagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaatcagatg
tggctctatgctggcatcgtggccgagacccccaacgtcaagaataaagacaggttcctg
atcttcttcgacgacggctacgcctcgtacgtgaaggagtgggagctgtacccggtctgc
cggccactgaaaaaagcctgggaagacattgaggatgtttcctgccgggatttcatcgag
gaatacatcactgcctaccccaaccggcccatggtactgctgaagagtgggcagctgatc
aaaacggagtgggaagggacctggtggaaatccagagtggaagaagtggatggaagtctg
gtgaaaatccttttcctggaagctcttcccatgggaactgtgaacgtttccttcttccca
caagaggacaaacgttgtgagtggatttaccgaggttccacacgcctcgagcccatgttc
agcatgaaaacttccacagcttccactcaggaaaagaagcagagcggtcaaaccaggact
cgtcccaacgttggtgctgtgaggagcaagggccctgtggtccagtacacccaggattta
gcaggagctggtccccagtacaaggctctggagcagcctccggccgcgcgtcccgcgtct
cctcagcctgtggagatggagtgctccgacacccagctggcccagggcagaaagcaggtg
gccaagaaaagcacttccttccgtcctggctccgtgggctccggacactcgtccccgtcc
tcccctgtcctcggggacaccccggcagccgggagagcccttccagccccgcagcaccgc
ctccccagcagcgtcccagcctcccagcccttccatggcatgatggaccgcgttcccaac
gagccgtcctaccgagcccctctggagaagctcttctacctgccgcacgtgtgcagctac
acctgcctgtcccgcgtccgccccttgcgcagcgaccagtaccgcagccgcaacccgctg
ctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaaccgcaag
atgggcttccacgtgctctacaagacgccctgcgggctctgcctgcgctccatgcacgag
atcgagcgctacctcttcgagacggactgcgacttcctgttcctggagatgttctgcctg
gacccctacgtgctggtggatcgcaagttccagccctacaagccttactactacatcgcc
gacatcaccaagggcaaggaggacgtgccgctgtcgtgcgtcaacgagatcgacaacacg
ccgccgccgcaggtggcctacagcaaggagaggatccccgggaaaggggtgtacatcaac
accagctgggaattcctcgtgggctgcgactgcaaggacggctgcagagacaaatccagg
tgtgcctgtcagcagctgaccatccaggccagcggctgcacccttggagggcaaatcaac
cccaactcaggctaccagcacaagcggctggaggaatgtctcccaacgggcgtttacgag
tgcaacaagaggtgcaagtgcaacgtcaacatgtgcaccaaccgcctggtgcagcacggc
ctccaggtgcggctgcagctcttcaagacccagaacaaaggctggggcattcgctgcctc
gacgacatcgccaagggctcctttgtctgcatctacgcagggaaaatcctcacggacgac
tttgctgacaaagaaggcctggagatgggtgacgagtacttcgccaacctggaccacatc
gagagcgtggagaacttcaaggagggctacgagagcgacgccaagtgctcctcggacaac
agcggcgtggacctcaaggacgacgacgacaacgagaacacgggcacggaggagctggag
gaatccaacgaggacagctcggacgacaacttctgcaaggacgagagcttcagcaccagc
tcggtgctgcgcagctacgccacgcgccggcagacgcgcggccagcgcgaccacggccac
tcggagacggcctccaaggactcggggctggcgcggcccccgggccacgaggagcccgcc
gccgcgccgccctgcaagctgcccgtgtccgaggagacctccaagcacaaggtggcctcg
tggctgagctccaacagcatggctgagggcttccaggacagcgacggcgccccgtgcttc
agggcgggaggagaagggggagaaggcaaagctgtgaaaatggagatggccgcggagagg
gagaagggctgcgctggcgcgctgggagatctcaacggagaggcaaaggcggccaagaag
gaggaacctgacgaagcaaccaaaatgcccgggctgagcagcctgggaaggaggtacggc
tacaacccctgtccccccaagctggatgggatccgcaggcccgtgggtggcacggtgctg
ctgcagagccgccgccggtcgctggccctgccgccccccttggaggatgtgctgacgctg
tcgagcagcaccgacaccgacgaggagcagagggcagggcagcccacggggcagcaggac
agcgacgacatccagaccatttcctcgggatccgaggaggaggaaggggaggacaagaaa
aatcagtcatctgggtcagggcccgtgaagagacaggtggcggtgaaatccacgcgaggc
ttcgccctcaagtccacccacggcatcgccatcaagtccacgccgctggcggcggccgac
aagggcgagagcgcggggccggtgcgccgcagcacgcggcagttctacgacggcgaggag
aactgctacatcatcgacgccaagctcgagggcaacctgggccgctacctcaaccacagc
tgcaccccgaatctctttgtgcagaatgtcttcgtggacacccatgaccttcgcttcccc
tgggtcgctttcttcgccagcaagcggatccgagccggcacggagctgacctgggattac
aactacgaggtcggcagcgtggagggcaaggagctgctgtgctgctgcggggccatcgac
tgccggggccggctgctctga
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integrated database retrieval system
