Hirundo rustica (Barn swallow): 120764565
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Entry
120764565 CDS
T09369
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like
KO
K06752
MHC class II antigen
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04145
Phagosome
hrt04514
Cell adhesion molecules
hrt04672
Intestinal immune network for IgA production
hrt05164
Influenza A
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120764565
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120764565
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120764565
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120764565
05168 Herpes simplex virus 1 infection
120764565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120764565
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120764565
Exosomal proteins of epithelial cells
120764565
Exosomal proteins of breast milk
120764565
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
ig
Ig_2
SIP1
Motif
Other DBs
NCBI-GeneID:
120764565
NCBI-ProteinID:
XP_058279809
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All DBs
Position
31:1148147..1151195
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AA seq
411 aa
AA seq
DB search
MSQVWEEIHPDLSLDLTEQPPIREVQTILSQSEPICQADPQRPTLPTWIPTEPSLVPSAP
CQGNLGRCQNLPALAMGRVAAAGAVLVALVALGAPPAAGAELSAVFQEMVKSECHFINGT
DRVKFVKRFIYNREQYVHFDSDVGLYMGDTPYGEKVARYWNSDPEWMAYRRDAVDRHCRH
NYELSTPFLVERRVPPSVSISLVPSSSQPSPGLLLCSVMDFYPAEIQVKWFQGQQELSEH
VVATDVVPNGDWTYQLLVLLDTPLHHGVSYTCQVEHISLEQRLSRHWDPPDILLDATRSK
MLTGIGGFLLGFVFLALGFGFYLCKKVRVGSRGSCSPSPGACMLLRDTPARCHPFFSAYR
GPEPLAAAAPPHGLRSSWDPQSIPALFWAGFVCPPQPCCHSAPAQLLPVSQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagtgtgggaagagattcacccagatctctcacttgacctaacagagcaaccg
ccaatcagagaggtacaaacaatattgagccaatcagaacccatttgccaggcagacccc
cagcgccccacgctccccacctggattccaactgagccctccctcgttcccagcgccccc
tgccaggggaatttggggaggtgtcagaacctgccggcgctggccatggggcgagtggcg
gcagctggggccgtactggtggcactggtggcgctgggggcgcccccggctgcgggcgcg
gagctctcggctgtgttccaggagatggttaagtccgagtgtcactttattaacggcaca
gaccgggtgaagttcgtgaagaggttcatctacaaccgggagcagtacgtgcacttcgac
agcgatgtggggctgtacatgggggacaccccatatggggagaaggttgccaggtactgg
aacagcgacccagaatggatggcgtatagacgggatgcggtggacaggcactgccggcac
aactacgagttgtccaccccgttcctcgtggagcgcagagtgccccccagtgtgtccatc
tcactggtgccctcgagctcccagcccagccccggcctcctgctctgctccgtgatggat
ttctaccctgctgagatccaggtgaagtggttccagggccagcaggagctctcggagcac
gtggtggccactgacgtggttcccaatggggactggacctaccagctcctggtgctgctg
gacacgcccctgcaccacggagtcagctacacctgccaggtggagcacatcagcctggag
cagcgcctgagccggcactgggaccccccagacatactgctggatgccacccgcagcaag
atgctgacagggattgggggcttcctgttgggctttgtcttcctggcgctggggtttggc
ttctacctgtgcaagaaggtgagggtggggtctagggggtcgtgttccccctcccctgga
gcatgcatgctccttcgggacaccccagcccggtgtcacccctttttctctgcctacaga
ggtcctgagccgctggcggccgcagcccctccccatggcctcaggtccagctgggacccc
cagtctatccctgcactgttttgggcggggttcgtgtgtcccccccagccctgctgtcac
tctgcccctgctcagctgctcccagtgtcccaataa
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