KEGG   Halovivax ruber: Halru_1905
Entry
Halru_1905        CDS       T02402                                 
Name
(GenBank) putative endoIII-related endonuclease
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hru  Halovivax ruber
Pathway
hru03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Halru_1905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hru03400]
    Halru_1905
Enzymes [BR:hru01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Halru_1905
DNA repair and recombination proteins [BR:hru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Halru_1905
 Prokaryotic type
     Halru_1905
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 DUF5361 DNA_pol_lambd_f HHH_2 DUF2400
Other DBs
NCBI-ProteinID: AGB16503
UniProt: L0ICF2
LinkDB
Position
1946260..1947150
AA seq 296 aa
MSEESDGDPADADEPTVNISGGASGGGAAATFDPGTADSRAERVVDRLGELYWQKTYGGQ
DAFTCLVRTILSQNTSDVASQPAHDALIERYGPDGGEADENGHEGATDGETESTSDLAAT
LADADREEIAETISAAGLYNQKSRMIQEAAEWVRTEFGTAPAFDAYVRETAPATVRDELL
SVHGVGPKTADCVLLFAGGQDGVYPVDTHVHRISRRLGIAPPEAGHEGVREALETTVPGP
KCGFGHTAMIQFGREYCTARKPACLDGTEACPLAGECDRVGVDIEAQSVVDPAEAD
NT seq 891 nt   +upstreamnt  +downstreamnt
atgagcgaggagtccgacggtgaccccgcggacgcggacgaacccaccgtcaacattagc
ggtggcgccagcggcggtggtgcggccgcgacgttcgatccggggacggccgactcccgg
gcggagcgggtcgtggatcgcctcggcgaactgtactggcagaagacctacggcgggcag
gacgccttcacctgcctcgtccgaacgattctgagccagaacaccagcgacgtggcgagc
caaccggcccacgacgcgttgatcgagcggtacgggcccgacggcggggaggccgacgaa
aacggccacgagggggcaaccgacggcgagacggaatccacatccgatctcgcggcaacg
ttggccgatgccgatcgcgaagaaatcgccgagacgatcagcgctgccggactctacaac
cagaagtcccggatgatccaggaagcggccgagtgggttcgcacggagttcggaacggca
cccgcgttcgacgcgtacgtcagagaaacggcgccggccacggtcagagacgaactcctg
tccgtccacggcgtcgggccgaagacagccgactgcgtgttgctcttcgccggtgggcag
gacggagtctatcccgtcgatacacacgtccaccggatcagccgccggctcggcatcgcc
ccacccgaagcgggtcacgagggcgtccgcgaagcgctcgaaacgaccgtcccgggccca
aaatgcggcttcggtcacacggcgatgatccagttcggtcgcgagtactgcactgctcgc
aaaccagcgtgcctcgatggcaccgaggcctgtccgctcgccggggagtgcgatcgggtc
ggcgtcgatatcgaggctcagtctgtggtcgatccagcagaggcggactga

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