Homo sapiens (human): 10388
Help
Entry
10388 CDS
T01001
Symbol
SYCP2, SCP-2, SCP2, SPGF1
Name
(RefSeq) synaptonemal complex protein 2
KO
K19529
synaptonemal complex protein 2
Organism
hsa
Homo sapiens (human)
Disease
H01282
Spermatogenic failure
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsa03036
]
10388 (SYCP2)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
10388 (SYCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYCP2_ARLD
SYCP2_SLD
Motif
Other DBs
NCBI-GeneID:
10388
NCBI-ProteinID:
NP_055073
OMIM:
604105
HGNC:
11490
Ensembl:
ENSG00000196074
UniProt:
Q9BX26
LinkDB
All DBs
Position
20:complement(59863571..59933637)
Genome browser
AA seq
1530 aa
AA seq
DB search
MPIRPDLQQLEKCIDDALRKNDFKPLKTLLQIDICEDVKIKCSKQFFHKVDNLICRELNK
EDIHNVSAILVSVGRCGKNISVLGQAGLLTMIKQGLIQKMVAWFEKSKDIIQSQGNSKDE
AVLNMIEDLVDLLLVIHDVSDEGKKQVVESFVPRICSLVIDSRVNICIQQEIIKKMNAML
DKMPQDARKILSNQEMLILMSSMGERILDAGDYDLQVGIVEALCRMTTEKQRQELAHQWF
SMDFIAKAFKRIKDSEFETDCRIFLNLVNGMLGDKRRVFTFPCLSAFLDKYELQIPSDEK
LEEFWIDFNLGSQTLSFYIAGDNDDHQWEAVTVPEEKVQIYSIEVRESKKLLTIILKNTV
KISKREGKELLLYFDASLEITNVTQKIFGATKHRESIRKQGISVAKTSLHILFDASGSQI
LVPESQISPVGEELVSLKEKSKSPKEFAKPSKYIKNSDKGNRNNSQLEKTTPSKRKMSEA
SMIVSGADRYTMRSPVLFSNTSIPPRRRRIKPPLQMTSSAEKPSVSQTSENRVDNAASLK
SRSSEGRHRRDNIDKHIKTAKCVENTENKNVEFPNQNFSELQDVIPDSQAAEKRDHTILP
GVLDNICGNKIHSKWACWTPVTNIELCNNQRASTSSGDTLNQDIVINKKLTKQKSSSSIS
DHNSEGTGKVKYKKEQTDHIKIDKAEVEVCKKHNQQQNHPKYSGQKNTENAKQSDWPVES
ETTFKSVLLNKTIEESLIYRKKYILSKDVNTATCDKNPSASKNVQSHRKAEKELTSELNS
WDSKQKKMREKSKGKEFTNVAESLISQINKRYKTKDDIKSTRKLKESLINSGFSNKPVVQ
LSKEKVQKKSYRKLKTTFVNVTSECPVNDVYNFNLNGADDPIIKLGIQEFQATAKEACAD
RSIRLVGPRNHDELKSSVKTKDKKIITNHQKKNLFSDTETEYRCDDSKTDISWLREPKSK
PQLIDYSRNKNVKNHKSGKSRSSLEKGQPSSKMTPSKNITKKMDKTIPEGRIRLPRKATK
TKKNYKDLSNSESECEQEFSHSFKENIPVKEENIHSRMKTVKLPKKQQKVFCAETEKELS
KQWKNSSLLKDAIRDNCLDLSPRSLSGSPSSIEVTRCIEKITEKDFTQDYDCITKSISPY
PKTSSLESLNSNSGVGGTIKSPKNNEKNFLCASESCSPIPRPLFLPRHTPTKSNTIVNRK
KISSLVLTQETQNSNSYSDVSSYSSEERFMEIESPHINENYIQSKREESHLASSLSKSSE
GREKTWFDMPCDATHVSGPTQHLSRKRIYIEDNLSNSNEVEMEEKGERRANLLPKKLCKI
EDADHHIHKMSESVSSLSTNDFSIPWETWQNEFAGIEMTYETYERLNSEFKRRNNIRHKM
LSYFTTQSWKTAQQHLRTMNHQSQDSRIKKLDKFQFIIIEELENFEKDSQSLKDLEKEFV
DFWEKIFQKFSAYQKSEQQRLHLLKTSLAKSVFCNTDSEETVFTSEMCLMKEDMKVLQDR
LLKDMLEEELLNVRRELMSVFMSHERNANV
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgccaataagaccagatctccagcagttggaaaaatgcattgatgatgctttaagaaaa
aatgatttcaaacctttgaaaacacttttgcaaattgatatttgtgaagatgtgaagatt
aaatgcagcaaacagtttttccacaaggtggacaaccttatatgcagggaacttaataaa
gaggatatccacaatgtttcagccattttggtttctgttggaagatgtggcaaaaatatc
agtgtattggggcaagctggacttctaacgatgataaaacaaggactaatacaaaagatg
gttgcctggtttgaaaaatccaaggacattattcagagtcaaggaaattcaaaagatgaa
gctgttctaaatatgatagaagacttagttgatcttctgctggtcatacatgatgtcagt
gatgaaggtaaaaaacaagtagtggaaagtttcgtacctcgcatttgttccctggttatt
gactcaagagtgaatatttgtattcagcaagagattataaaaaaaatgaatgctatgctt
gacaaaatgcctcaagatgcccggaaaatactctctaaccaagaaatgttaattctcatg
agtagtatgggagaaaggattttagatgctggagattatgacttacaggtaggcattgta
gaagctttgtgtagaatgaccacagaaaaacaaagacaagaactggcacatcagtggttt
tcaatggattttattgctaaggcatttaaaagaattaaggactctgaatttgaaacagat
tgcaggatatttctcaaccttgtaaatggcatgcttggagacaaaagaagggtctttaca
tttccttgtttatcagcatttcttgataaatatgagctgcaaataccatcagatgaaaaa
cttgaggaattttggattgattttaatcttgggagtcagactctctcattctacattgct
ggagataatgatgatcatcaatgggaagcagttactgtgccagaggaaaaagtacaaata
tacagcattgaagtgagagaatcaaagaagctactgacaataattctgaaaaatacagta
aaaattagcaaaagagaagggaaagaattgcttttgtattttgacgcatcactagaaatc
actaatgtaactcaaaaaatttttggtgcaactaaacatagggaatctatcagaaaacaa
ggtatttcagttgccaaaacgtcgctgcatatactttttgacgcaagtggatcacagatt
ctagtgccagaaagtcaaatctcaccagtcggagaagagctcgttagtttaaaggaaaaa
tcaaagtccccaaaggaatttgctaaaccttcaaaatatatcaaaaacagtgacaaaggg
aatagaaataatagtcagcttgagaaaactactcctagcaaaagaaaaatgtctgaagca
tcaatgattgtttctggtgcagatagatacactatgagaagtccagtgcttttcagcaac
acatcaataccaccacgaagaagaagaattaaaccaccactgcaaatgacgagctctgca
gagaaacctagtgtttctcaaacatcagaaaatagagtggataatgctgcatcactgaaa
tctagatcatcagaaggaagacatagaagagataatatagacaaacatatcaaaactgct
aagtgtgtagaaaacacagaaaataagaatgttgaattcccaaaccaaaattttagtgaa
ctccaggatgttataccagattcacaggcagcggaaaaaagagatcatactatattacct
ggtgttttagacaacatctgtggaaataaaatacacagcaaatgggcatgttggacacct
gtaacaaacattgaactatgtaataaccaaagagcaagtacttcgtcaggagacacattg
aatcaagatattgttataaataaaaaacttactaaacaaaaatcatcctcttcaatatct
gatcataattctgaaggaacaggaaaagtgaaatataagaaagaacaaaccgaccatatc
aaaatagataaagcagaagtagaagtttgcaagaaacacaatcagcaacaaaatcatcct
aaatattcagggcagaaaaatactgaaaatgccaagcagagtgattggcctgttgaatct
gaaactacttttaaatcggttctcctaaataagacaattgaagaatcgctgatatatagg
aagaaatacatattgtcaaaagatgtgaatactgctacttgcgataaaaatccatctgct
agcaaaaatgtgcaaagtcatagaaaagcagagaaagaattgacttctgagcttaattcc
tgggattcgaaacaaaaaaaaatgagagaaaagtcaaaagggaaagaatttaccaatgta
gcagaatccttgataagccaaatcaataaaagatacaaaacaaaagatgacatcaagtct
acaagaaaattaaaggagtctttgattaacagtggtttttcaaacaaacctgttgtacaa
ctcagtaaggaaaaagttcagaaaaaaagctacagaaaactgaagactacctttgttaat
gttacttctgaatgcccagtgaatgatgtttacaattttaatttgaatggagctgatgac
cctatcataaaacttggaatccaagagtttcaagctacagctaaagaagcttgtgcggat
aggtcaattagattggtaggtccaaggaatcatgatgaacttaaatcttctgtcaaaaca
aaagataaaaaaattataacaaatcatcaaaagaaaaatctgtttagtgatactgaaaca
gagtacagatgtgatgacagcaagactgatattagctggctaagagaaccgaaatcaaaa
ccacagctaatagactatagcagaaataaaaatgtgaagaatcataaaagtggaaaatca
agatcatccttggaaaagggacagccaagctctaaaatgacacccagtaaaaatatcaca
aaaaagatggacaagacaattccggaaggaagaatcagacttccacgaaaagcaaccaaa
acaaaaaaaaactataaagatctctcaaattcagaatcagagtgtgaacaagaattttca
cattcatttaaagagaacataccagtaaaggaggagaatatccattccagaatgaaaacg
gtaaagctaccaaagaaacaacagaaagtcttctgtgctgaaacagaaaaggaactatca
aaacaatggaaaaactcatctctactaaaagatgctatacgagataattgccttgactta
tctcccagatctttatctggcagtccatcatctatagaagtaacgagatgtatagagaaa
ataacagaaaaggattttactcaggattatgactgcataacaaaatctatatcaccttat
ccaaaaacttcatcacttgaatccttaaatagtaacagtggagttggaggtacaataaag
tcacccaaaaacaatgagaaaaacttcctgtgtgcaagtgaaagttgttcaccaattcca
cgaccactgtttttgcccagacatactccaactaagagtaatactattgtaaatagaaaa
aaaataagttctctggtacttacacaagaaacacaaaacagtaacagctattcagatgta
agcagttatagttcagaagaacggtttatggaaattgaatctccacatatcaatgaaaat
tatatacaaagcaaaagagaggaaagtcatttagcatcttcattatccaagtctagtgaa
ggaagagagaaaacgtggtttgacatgccctgtgatgctactcatgtatcaggccccacc
caacatcttagtcgcaaaagaatatatatagaagataatctaagtaattccaatgaagta
gaaatggaagagaaaggagaaaggagagcaaacttgcttcccaaaaaactgtgtaaaatt
gaagatgcagatcatcatatccacaaaatgtctgaaagtgtatcttcattatcaacaaat
gacttttctattccttgggagacctggcaaaatgaatttgcagggatagagatgacttat
gagacttacgagaggctcaattcagaatttaagagaaggaataatatccgacataaaatg
ttgagttattttactacgcagtcttggaaaacagctcagcaacatctgagaacaatgaat
catcaaagtcaggactctaggattaaaaaacttgataaattccaattcattatcatagag
gagctggagaattttgaaaaagattcacagtctttaaaagatttggaaaaggaatttgtg
gacttttgggaaaagatatttcagaagttcagtgcatatcaaaaaagcgaacaacagagg
cttcatcttttgaaaacttcattggctaaaagtgtcttctgtaatactgatagtgaagaa
actgtttttacatccgagatgtgtttgatgaaagaagatatgaaagtgctgcaagacagg
cttcttaaggacatgctagaagaggagcttcttaatgtacgcagagaactgatgtcagta
ttcatgtctcatgaaagaaatgctaatgtgtga
DBGET
integrated database retrieval system