KEGG   Homo sapiens (human): 10898
Entry
10898             CDS       T01001                                 
Symbol
CPSF4, CPSF30, NAR, NEB-1, NEB1
Name
(RefSeq) cleavage and polyadenylation specific factor 4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
hsa  Homo sapiens (human)
Pathway
hsa03015  mRNA surveillance pathway
hsa05164  Influenza A
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    10898 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    10898 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    10898 (CPSF4)
   03019 Messenger RNA biogenesis [BR:hsa03019]
    10898 (CPSF4)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     10898 (CPSF4)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     10898 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 10898
NCBI-ProteinID: NP_006684
OMIM: 603052
HGNC: 2327
Ensembl: ENSG00000160917
UniProt: O95639
Structure
LinkDB
Position
7:99438943..99457373
AA seq 269 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPAKQSNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagtttgacttggagatcgcggtggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaagtcgggcgctgctgtc
tgtgaattctttttgaaagctgcctgcggcaaagggggcatgtgtccgtttcgccacatc
agtggtgagaagacagttgtgtgcaaacactggctgcgtggcctatgcaagaaaggggac
cagtgtgagttcctgcatgagtatgacatgaccaagatgcccgagtgctacttctactcc
aagttcggggagtgcagcaacaaggaatgtcccttcctgcacatcgaccccgagtccaag
atcaaggactgtccttggtatgaccgtggcttctgcaagcacggtcccctctgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccggaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgcccatgggaaccaccgagcagccccca
ctgccgcagcagacacagcctccagcaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagaaccccgcag
gtcatcggggtcatgcagagtcaaaacagcagcgcgggcaaccggggaccccggccactg
gagcaggtcacctgttacaagtgtggcgagaaaggacactacgccaacagatgcaccaaa
gggcacttggcctttctcagtggacagtga

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