Homo sapiens (human): 11107
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Entry
11107 CDS
T01001
Symbol
PRDM5, BCS2, PFM2
Name
(RefSeq) PR/SET domain 5
KO
K22534
PR domain zinc finger protein 5 [EC:2.1.1.-]
Organism
hsa
Homo sapiens (human)
Disease
H01902
Brittle cornea syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsa03000
]
11107 (PRDM5)
Transcription factors [BR:
hsa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
11107 (PRDM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
PRDM2_PR
zf-C2H2_6
zf-met
zf-C2H2_11
zf-Di19
SET
Trm112p
Zf-C2H2_ZNF451_C
DUF4428
zf-C2H2_15
Bflower_2
zf-C2HC_2
zf-C2H2_3rep
zf-C2H2_8
Zn_ribbon_PriA
Zap1_zf1
Zf-C2H2_ZNF451_6th
zf-C2H2_ZNF462
zf-C2H2_16
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
11107
NCBI-ProteinID:
NP_061169
OMIM:
614161
HGNC:
9349
Ensembl:
ENSG00000138738
UniProt:
Q9NQX1
Structure
PDB
PDBj
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Position
4:complement(120684291..120922726)
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AA seq
630 aa
AA seq
DB search
MLGMYVPDRFSLKSSRVQDGMGLYTARRVRKGEKFGPFAGEKRMPEDLDENMDYRLMWEV
RGSKGEVLYILDATNPRHSNWLRFVHEAPSQEQKNLAAIQEGENIFYLAVEDIETDTELL
IGYLDSDMEAEEEEQQIMTVIKEGEVENSRRQSTAGRKDRLGCKEDYACPQCESSFTSED
ILAEHLQTLHQKPTEEKEFKCKNCGKKFPVKQALQRHVLQCTAKSSLKESSRSFQCSVCN
SSFSSASSFEQHQETCRGDARFVCKADSCGKRLKSKDALKRHQENVHTGDPKKKLICSVC
NKKCSSASSLQEHRKIHEIFDCQECMKKFISANQLKRHMITHSEKRPYNCEICNKSFKRL
DQVGAHKVIHSEDKPYKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQ
RHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHKKYRCELCNKAFVTPSVLRSHK
KTHTGEKEKICPYCGQKFASSGTLRVHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHT
REKPYKCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVCDLAFSLKKMLIRHKMTHNPNRP
LAECQFCHKKFTRNDYLKVHMDNIHGVADS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatgtacgtgccggacaggttctccctgaagtcctcccgggttcaggacggc
atggggctctacacggcccgcagagtgcgaaagggtgaaaagttcggaccctttgctgga
gagaagagaatgcctgaagacttggatgaaaatatggattacaggttgatgtgggaggtt
cgtgggagtaagggagaagttttgtacattttggatgctaccaacccacggcactccaac
tggcttcgcttcgttcatgaggcaccatctcaggagcagaagaacttggctgccattcaa
gaaggagaaaacattttctatttggcagttgaagatatagaaacagacacggagcttctg
attggctacctggatagtgacatggaggctgaggaggaagaacagcaaattatgacagtc
atcaaagaaggggaagttgaaaattctagaagacaatcaacagcgggcagaaaagatcgc
cttggctgtaaagaggactatgcttgtcctcaatgtgaatcgagttttaccagtgaggat
attcttgctgagcatctccagacattgcaccagaaacccacagaggagaaagaatttaag
tgcaagaactgtgggaagaaattcccagttaagcaggctttgcaaagacatgttcttcag
tgcacagcgaaaagcagtctaaaggagtcttcgcgaagttttcagtgctctgtttgcaat
tcttccttcagttcagcatcgagttttgagcagcaccaggagacttgccggggggatgcc
aggtttgtgtgcaaggctgacagctgtggaaagaggctgaagagcaaggatgccctgaaa
agacaccaggaaaatgtccacactggagatcctaagaaaaagcttatatgttcagtgtgc
aataaaaagtgttcttcagcatcaagcctacaggaacatagaaagattcatgagatattt
gattgtcaagaatgtatgaagaaatttatttcagctaatcagctaaaacgtcatatgatc
acccactcagaaaaacgaccctataattgcgagatttgtaataagtctttcaagaggctt
gatcaagtgggtgctcacaaagtaatacacagcgaagacaaaccttacaaatgcaaactt
tgtggaaagggatttgcccacagaaatgtttacaagaatcataagaagacccactctgag
gagagaccgttccaatgtgaagaatgtaaagctttgttccggaccccattttctttacag
agacacctgctaatacataacagtgagaggactttcaagtgccatcactgcgatgctacc
tttaagaggaaggatacattaaatgttcatgtccaggtggttcatgaaagacacaagaag
tataggtgtgagctatgtaataaggcctttgttacaccttcagtgcttagaagtcataag
aaaacacatacaggagaaaaggagaaaatctgtccatattgtggccagaaatttgccagc
agtggtacactcagagttcatatccggagccacacaggtgagcgtccctatcaatgtcct
tactgtgaaaaaggattcagtaaaaatgatggactgaagatgcacattcgtactcacacc
agggagaagccgtacaagtgctcagagtgcagcaaggccttcagccagaagcgaggcctg
gatgagcacaagaggacgcacactggagaaaagccttttcagtgtgatgtttgtgatttg
gcttttagcctgaagaaaatgctgattcgacacaagatgactcataatcccaatcgtccc
ctggcagaatgccagttttgccataagaagtttacaaggaatgactacctcaaagtgcac
atggacaatatccatggtgtagctgacagctaa
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