Homo sapiens (human): 11346
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Entry
11346 CDS
T01001
Symbol
SYNPO, SYNPO1
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
hsa
Homo sapiens (human)
Pathway
hsa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
11346 (SYNPO)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
11346
NCBI-ProteinID:
NP_001159680
OMIM:
608155
HGNC:
30672
Ensembl:
ENSG00000171992
UniProt:
Q8N3V7
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All DBs
Position
5:150586010..150659207
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AA seq
929 aa
AA seq
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MLGPHLPPPPLAPSEGRPTPCAFQIPDGSYRCLALEAEESSGEEGLQGEVGPTDLEEDEG
VSRSGDDSACRVTQGTPQLPKALGIQPPSCSREEQGASQHDDRASQDWDVVKAGQMMTAS
PSPGPGPRVAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQR
VNEFTLESHGQRGQKPSQESLRVLPSSLPGHAPGLSLSSTSLPEPGPPRHPSPQSPDRGV
PGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPA
PPPAEVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQ
NSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATL
IPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVV
NRTARPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVE
RRMMGQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKG
QAVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGV
EEEPFALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEA
SGKGAELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSP
ARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSL
DLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSP
RAKQAPRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtcctcacctcccacctccgccccttgcacccagcgaagggaggcctaccccc
tgcgccttccagatccctgatggaagctacaggtgtctggctctggaagccgaggagagc
agcggtgaggagggcctgcagggagaggtggggcctaccgacctggaagaggatgagggg
gtcagcaggagtggggacgactctgcctgcagagtcacccaggggacaccgcagctgccc
aaagccctgggcatccaaccacccagctgctccagagaggaacaaggggcgtcccagcac
gacgacagggccagccaggactgggatgtagtgaaggccgggcagatgatgacagccagc
cccagccctggccctgggcccagagtggcccagaaaccagcgttgggccggagcactagc
ctcacggagaaggatctgaaagaagccaaggcgcggagccagcagattgcagcccagctg
accacccctcccagctccaattcccgtggcgtccagctcttcaacaggcgccggcagagg
gtgaacgagttcaccttggagagccacggccagaggggacagaagcccagccaggagtcc
ctcagagtgctcccttcaagcctcccaggccatgcaccggggctcagcctgagttccacc
tcgctgccggagccaggccctccacggcaccccagtccccagagccccgacagaggggtc
cctggccacagcatggaggggtactcagaggaggctagcttgctgcggcacctggagaag
gtggccagtgaggaggaagaggtaccactggtggtttatctaaaggagaatgcagcactg
ctgacagccaatgggctgcacctgtcccaaaaccgagaggcccagcagtcctcaccggcc
ccacctccagctgaggtccacagcccagctgcagatgtcaaccaaaaccttgcctcgccc
agtgccacgctcaccacaccaacttctaacagcagccacaatccgccagccaccgatgtc
aatcagaacccaccggcaactgttgtcccacagagcctgccactttctagcatccaacag
aattcctcagaggcccaactcccatctaatggcacagggcctgcttccaaacccagcacc
ctgtgtgctgatgggcaaccccaggcaccggctgaggaggtgagatgcagcacactccta
attgacaaggtatcaactccagctaccaccaccagcaccttctccagagaagctacgctc
atccccagctccaggcccccagcctcagatttcatgtccagctccctgctcattgacatc
cagcccaacaccctagtggtgtcagcagatcaagagatgtctgggcgagcagctgccacc
acgcccaccaaggtctacagtgaggtccacttcacactggccaagcccccatcagtggtc
aacaggacggccaggccttttgggatccaggcgccagggggcaccagccagatggagagg
agccccatgctagagagacgacattttggggagaaggccccggctccccagccccccagt
ttgccagacaggagcccccggccacagagacacataatgtcccgcagccccatggtggaa
aggaggatgatggggcagcgaagcccggcctcagagagacgccccttggggaacttcact
gcaccccccacctacactgagaccttgtccacagcccctctggcttcctgggtgaggtct
cctccctcatattctgtcctgtatcccagctccgaccccaagtcttctcatctgaagggc
caggcggttcctgccagcaagacgggcattctggaggagtcgatggcccgccggggcagc
cgcaaatccatgtttactttcgtggagaagcccaaggtgaccccgaatccagacttgctg
gatctggtacagacagcggatgagaagcggcggcagagggaccagggggaggtaggcgtg
gaggaggagcccttcgcactgggggccgaggcctccaacttccagcaggagccagcacct
cgtgacagggccagccccgcggcggcggaggaggtggtaccagagtgggcctcctgcctc
aagtcaccccgcatccaggccaagccgaagcccaaacccaaccagaacctctccgaggcc
tctgggaagggagctgagctctacgcccgccgccagtcacggatggagaaatatgtcatc
gagtcttcaagccacacgccagagctggcccgctgcccatcacctaccatgtccctgcct
tcctcctggaaataccccactaacgcccccggggccttccgagtggcatcccgaagccca
gcccggaccccgcctgcctccctctaccatggctacctgcctgagaacggggtcctgcgc
ccagagcccaccaagcagccgccataccagctgcgcccctcgctctttgtcctctcacct
atcaaggagcctgccaaggtctcaccaagagctgcctcgcccgccaagcccagctccttg
gacctggtgcccaacctgcccaagggggctctccctccatctcctgccctgcctcggccc
tcgcgctcctcaccgggcctctacacctcccccggccaggacagcctgcagcccactgcc
gtgagccctccttacggcggtgacatctcccccgtgtctccctccagggcgtggtctccc
cgagccaagcaggcccccaggccctccttctctacccggaacgccgggatcgaggctcag
gtgtggaagccttccttctgcttcaagtaa
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