Homo sapiens (human): 114780
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Entry
114780 CDS
T01001
Symbol
PKD1L2, PC1L2
Name
(RefSeq) polycystin 1 like 2 (gene/pseudogene)
KO
K04988
polycystin 1L2
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsa04040
]
114780 (PKD1L2)
Ion channels [BR:
hsa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114780 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Gal_Lectin
Lectin_C
Ion_trans
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
114780
NCBI-ProteinID:
NP_443124
OMIM:
607894
HGNC:
21715
Ensembl:
ENSG00000166473
UniProt:
Q7Z442
LinkDB
All DBs
Position
16:complement(81100875..81220394)
Genome browser
AA seq
2463 aa
AA seq
DB search
MSAVGLVLLVLALRLRATTVKPEEGSFCSNSQVAFRDACYEFVPLGRTFRDAQSWCEGQG
GHLVFIQDEGTQWFLQKHISQDREWWIGLTWNLARNGTTEGPGTWLDTSNVTYSNWHGGQ
AAAAPDTCGHIGRGPSSEWVTSDCAQTFAFMCEFRVGQSLACEGLNATVHCGLGQVIQVQ
DAVYGRQNPHFCTQDAGRPSDLEQGCSWANVKEEVAGQCQELQSCQVAADETYFGNLCPT
QGSYLWVQYQCREALQLMVSSESFIFDNVTISLTWLLSPYIGNLSCIISTGDSHTFDPYN
PPSNVTHQFTSPGEFTVFAECTTSEWHVTAQRQVTVRDKMETLSVTACSGLSQSGAGPLC
QAVFGDPLWIQVELDGGTGVTYTVLLGDITLAESTTQKGSLPYNLILDRETQKLMGPGRH
RLEIQATGNTTTSTISRNITVHLVELLSGLQASWASDHLELGQDLLITISLAQGTPEELT
FEVAGLNATFSHEQVSFGEPFGICRLAVPVEGTFLVTMLVRNAFSNLSLEIGNITITAPS
GLQEPSGMNAEGKSKDKGDMEVYIQPGPYVDPFTTVTLGWPDNDKELRFQWSCGSCWALW
SSCVERQLLRTDQRELVVPASCLPPPDSAVTLRLAVLRGQELENRAEQCLYVSAPWELRP
RVSCERNCRPVNASKDILLRVTMGEDSPVAMFSWYLDNTPTEQAEPLLDACRLRGFWPRS
LTLLQSNTSTLLLNSSFLQSRGEVIRIRATALTRHAYGEDTYVISTVPPREVPACTIAPE
EGTVLTSFAIFCNASTALGPLEFCFCLESGSCLHCGPEPALPSVYLPLGEENNDFVLTVV
ISATNRAGDTQQTQAMAKVALGDTCVEDVAFQAAVSEKIPTALQGEGGPEQLLQLAKAVS
SMLNQEHESQGSGQSLSIDVRQKVREHVLGSLSAVTTGLEDVQRVQELAEVLREVTCRSK
ELTPSAQWEASLALQHASEALLTVSAKARPEDQRRQAATRDLFQAVGSVLEASLSNRPEE
PAEASSSQIATVLRLLRVMEHVQTTLLLGKLPGGLPAMLATPSISVYTNRIQPWSWQGSS
LRPDAADSATFMLPAASSLSSLEGGQEPVDIKIMSFPKSPFPARSHFDVSGTVGGLRVTS
PSGQLIPVKNLSENIEILLPRHSQRHSQPTVLNLTSPEALWVNVTSGEATLGIQLHWRPD
IALTLSLGYGYHPNKSSYDAQTHLVPMVAPDELPTWILSPQDLRFGEGVYYLTVVPESDL
EPAPGRDLTVGITTFLSHCVFWDEVQETWDDSGCQVGPRTSPYQTHCLCNHLTFFGSTFL
VMSNAINIHQTAELFATFEDNPVVVTTVGCLCVVYVLVVIWARRKDAQDQAKVKVTVLED
NDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGEREPHHLADPDTPVFERGAVDAFL
LSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVYDLVMDRKWYFLCNSWLSINVGDCVLD
KVFPVATEQDRKQFSHLFFMKTSAGFQDGHIWYSIFSRCARSSFTRVQRVSCCFSLLLCT
MLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSILMFPINLLIVQIFQNTRPRVA
KEQNTGKWDRGSPNLTPSPQPMEDGLLTPEAVTKDVSRIVSSLFKALKVPSPALGWDSVN
LMDINSLLALVEDVIYPQNTSGQVFWEEAKKREDPVTLTLGSSEMKEKSQCPKPKAARSG
PWKDSAYRQCLYLQLEHVEQELRLVGPRGFSQPHSHAQALRQLQTLKGGLGVQPGTWAPA
HASALQVSKPPQGLPWWCILVGWLLVAATSGVAAFFTMLYGLHYGRASSLRWLISMAVSF
VESMFVTQPLKVLGFAAFFALVLKRVDDEEDTVAPLPGHLLGPDPYALFRARRNSSRDVY
QPPLTAAIEKMKTTHLKEQKAFALIREILAYLGFLWMLLLVAYGQRDPSAYHLNRHLQHS
FTRGFSGVLGFREFFKWANTTLVSNLYGHPPGFITDGNSKLVGSAQIRQVRVQESSCPLA
QQPQAYLNGCRAPYSLDAEDMADYGEGWNATTLSNGSSFPQAWQYQSQDQRQGYPIWGKL
TVYRGGGYVVPLGTDRQSTSRILRYLFDNTWLDALTRAVFVESTVYNANVNLFCIVTLTL
ETSALGTFFTHAALQSLRLYPFTDGWHPFVVAAELIYFLFLLYYMVVQGKRMSKETWGYF
CSKWNLLELAIILASWSALAVFVKRAVLAERDLQRCRNHREEGISFSETAAADAALGYII
AFLVLLSTVKLWHLLRLNPKMNMITAALRRAWGDISGFMIVILTMLLAYSIASNLIFGWK
LRSYKTLFDAAETMVSLQLGIFNYEEVLDYSPVLGSFLIGSCIVFMTFVVLNLFISVILV
AFSEEQKYYQLSEEGEIVDLLLMKILSFLGIKSKREEPGSSREQPGSLSQTRHSRPAQAL
PKD
NT seq
7392 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgggcttggtactcctggtgcttgctctgaggcttagggccaccactgtt
aagccagaggaaggcagcttttgctctaacagccaggtggccttcagagatgcttgctat
gaatttgtgccactcggacgcaccttccgtgatgcccagagctggtgcgaggggcaagga
ggccatttggtcttcattcaggacgaaggcacccagtggtttctgcagaagcacatctcc
caggacagggaatggtggattggactcacgtggaacttggcacggaatggaaccacggag
gggccggggacttggttggacacctccaatgtgacctacagcaactggcatggagggcag
gccgccgctgcccctgacacctgcggccacatcgggagaggcccttcctctgagtgggtg
acctcggactgcgcccagaccttcgccttcatgtgcgagttccgggttggccagagcctg
gcctgcgagggactcaatgccaccgtgcactgtggcttggggcaggtcatccaggtccag
gatgccgtctacgggcgccagaatccccatttctgcacccaggatgccgggcgtccttca
gatctggagcagggatgcagctgggccaacgtcaaggaggaggtggcaggccagtgccag
gagctacagtcatgccaggtggcagcagatgagacctactttggaaacctgtgtccgact
cagggcagttacctgtgggtgcagtaccagtgccgggaagccctgcagctgatggtgtcc
agtgagagtttcatctttgacaatgtcaccatctccctgacgtggctcctctcaccctac
ataggaaacctgtcctgtataattagtacaggagacagccacacttttgatccctacaac
ccgccgagcaatgtgacccaccagttcacatctcctggggaattcaccgtgtttgctgaa
tgcacaaccagtgagtggcatgtgacagctcagaggcaggtgaccgtgcgagacaagatg
gagacgctcagtgtgactgcatgctccggcctgtcccagtcaggagccggccctctctgc
caggctgtctttggggatcctctgtggattcaggtggagcttgatggaggaacaggagtg
acttacactgtgcttttgggtgacataaccctggccgagtccaccacccaaaagggctcg
ctaccgtacaatctgatcctggacagagaaacccagaaactgatgggccctgggaggcac
cgcctggagatccaagccaccggcaacaccaccacctctacaatctccagaaacattaca
gtccacttggtggagctgctgtcagggctgcaggcctcctgggcttctgaccatttggag
cttggacaggacctattgatcaccatctcattggctcagggcaccccggaagagctgacc
tttgaggtggctggactcaatgcaaccttctcccacgagcaagtgagctttggagagcca
tttgggatttgccgcctggctgttccggttgaaggcacctttctggtcaccatgctggtg
aggaatgccttctccaacctgagtttggaaatcgggaacatcactatcacagccccttcc
ggtctccaagaaccatctgggatgaatgctgaaggaaagagtaaagataaaggcgatatg
gaggtgtacatccaacctggtccatatgtggatcctttcacgacagtgaccctgggctgg
ccagacaatgacaaggagttacgcttccaatggtcatgtgggtcttgctgggctctgtgg
agcagctgtgttgagaggcagctgcttcgcacagaccagagggagctggtggttccagca
tcctgcctgccgccgcctgactctgctgtcaccctgcgcctggctgttctgagaggccaa
gagctggagaacagggcagagcagtgcctctacgtgtctgcgccctgggaactcaggcct
cgagtcagctgtgagaggaactgcaggccagttaatgccagcaaagacattctgctcagg
gtcaccatgggggaggactctccagtggctatgttcagctggtatttggacaacacccca
acagagcaggctgagcccctcctggatgcctgcagactcagaggattttggccaaggtcc
ttaaccctcctccagagcaacacctccacgttgctgttgaacagctcgtttctgcagtcc
cggggagaggtcatccgaatcagagccacagcactgaccaggcatgcctatggggaggac
acctatgtgatcagcactgtgcctccccgtgaggtgcctgcctgcactattgccccagag
gagggcaccgttctgacgagctttgccatcttctgcaacgcctccacagccctgggaccc
ctggagttctgcttctgtctggaatcaggttcctgcctacactgtggccctgaacctgcc
ctcccatcagtgtatctgccacttggagaggagaacaatgactttgtgctgacagtagtt
atttctgccaccaatcgtgcaggggacacgcagcagacccaggccatggctaaggtggca
ctcggagacacatgtgttgaggatgtagcattccaggctgccgtgtcagagaaaatcccc
acagctctgcaaggcgagggtggccccgagcagctcctccagctggccaaggctgtgtcc
tccatgctgaaccaagagcatgaaagccagggctcaggacagtcactgagcatagacgtc
agacagaaggtcagagagcatgtgctgggatcactgtctgcagtcaccaccggcttggag
gacgtgcagagggtgcaggagctggccgaggtgctgagagaggtgacctgccggagtaag
gaactcacaccctcggcccagtgggaggccagcttggctctacagcatgccagtgaggcc
ctgttgacagtgagtgccaaggcccgccctgaggaccagaggcgccaggcagccaccagg
gacctgtttcaggctgtgggcagtgtgctggaagcttccctgagcaacagaccagaagag
cctgcggaggccagcagcagccagattgccacagtgctgcggctgcttcgagtcatggag
catgtgcagaccaccctcctgctgggaaaactgccagggggccttccagccatgctggcc
accccctccatctctgtgtacacaaacagaatacaaccctggagttggcaaggctcctcc
ctgcgccctgatgccgcagactctgcaaccttcatgctgcccgctgcctcctccctcagc
tctctggagggcggccaggagcccgtggatataaagatcatgagtttcccaaagagcccc
tttccagcccgaagccactttgatgtcagcgggactgtcggtggcctccgtgtgaccagc
cctagtggtcaactcatacctgtgaagaatctgtcggagaatatcgagatcctgctgccc
cggcattcacaaagacacagccagccgaccgtgttgaacctgaccagtcctgaagctttg
tgggtgaacgtgacttcaggggaggcaaccttggggatccagctgcactggagaccagac
attgcactcacgcttagcctgggctatggctaccaccccaacaagagcagctacgatgcc
caaactcacctcgtaccaatggtggctccagatgagctgcccacgtggatcctgagccca
caggacctgcgttttggagaaggggtctactatttgactgtggtccctgagtctgacctg
gagccagcccccggcagggacctcacggttggcatcaccaccttcctgtctcactgtgtg
ttctgggatgaggtccaggagacttgggacgactcaggatgccaggtggggcctcggacc
agcccctaccagacacactgcctctgcaaccacctcactttcttcggaagcacgttcctg
gtgatgtccaatgccatcaacatccaccagactgctgagctctttgccacctttgaggac
aaccctgtggtcgtgaccaccgtgggctgcctgtgtgtggtctacgtgctggtggtgatc
tgggcgaggaggaaggacgctcaggatcaggccaaggtgaaggtcacagtgctggaagac
aatgatccctttgctcagtaccactacctggtgacagtctacacaggacaccgacgaggg
gcagccacgtcctcaaaggtgactgtcaccctgtatggcctggatggagagagagagccc
caccacctggctgatcccgacactccggtttttgagcgaggagcagtggatgccttcctc
ctctccaccctgttccccctgggagaactgcggagcctccggctgtggcatgacaactca
ggggaccggccatcgtggtatgtgagccgggtgctggtctatgacctggtgatggaccgg
aagtggtatttcctgtgcaactcctggctatccatcaatgttggagattgcgtcctcgat
aaggtgtttcctgtggccacggagcaggacagaaaacaattcagccacctgtttttcatg
aagacttccgcgggcttccaggatggacacatctggtattcgatcttcagccgctgcgct
cgcagcagcttcacccgcgtccagagggtgtcctgctgcttctccctgctgctgtgcacc
atgctgaccagcatcatgttctggggggtccccaaggacccagctgagcaaaagatggac
ttgggtaaaattgaattcacctggcaggaggtgatgattggcctggagagctccatcctc
atgttccccatcaacctcctgattgttcagatctttcagaacacccgtccccgggtcgcg
aaggagcagaacactggaaaatgggaccgggggtcccccaacctgactccctccccacag
cccatggaggacggccttctgacacctgaggcagtgaccaaggatgtgtcaagaatcgtc
agctccctcttcaaagctctcaaggtgccatcccccgccttgggctgggactcagtgaac
ttgatggacatcaacagtctcctcgccttggtggaagatgtcatttatccacagaacaca
tcagggcaggtgttctgggaggaagccaaaaagagagaggaccctgtaacactcactttg
gggtcatcagaaatgaaagagaaatcacagtgtcccaagcccaaggcggcacggagtggc
ccctggaaggacagcgcctacaggcagtgtctgtaccttcagctggaacacgtggagcaa
gagctgcggctggtggggccccgaggcttctcccagccccacagccatgcccaggccctc
aggcagctgcagaccctgaagggcggcctgggggtacagccgggcacctgggcccctgca
catgccagcgctcttcaggtgagcaaaccccctcaaggcctgccctggtggtgcatcctg
gtgggctggctcctggtagcggccaccagtggcgtggcggccttcttcaccatgctctac
ggcctgcactacgggagggccagctccctcaggtggctcatctccatggctgtctccttc
gtggagagcatgttcgtcacccagcccctgaaggtgctgggattcgctgctttctttgca
ctggtcttgaagagagtggacgatgaggaggatactgtggccccgctgccaggacatctg
ttgggcccagacccctatgccttgttccgagcacgaagaaacagcagcagggatgtctac
cagccacctctcaccgctgccattgagaagatgaaaaccacccacctcaaggaacagaaa
gcatttgccctcatcagagaaatcctggcatacttgggcttcctgtggatgctactgctc
gtggcctacgggcagagggaccccagcgcctaccacctcaacagacacctccagcacagc
ttcaccaggggcttttcaggtgtgctcggcttccgagagttcttcaagtgggccaacacc
accctcgtgagtaacctgtatggtcaccccccaggctttatcactgatgggaactccaag
ctggttggcagtgcccagattcgtcaagtgagggtccaggaaagctcttgccctcttgcc
cagcagccgcaggcatatctcaacggatgccgtgcaccatattccctggatgctgaagac
atggcagactatggggaaggctggaatgccaccaccctcagtaatggcagtagctttccc
caggcttggcagtaccagagccaggaccaacgtcaagggtatcccatctggggcaaactc
actgtgtaccggggaggaggctacgtggtccccttggggactgatcgccaaagcacgtca
agaattctccgctatctctttgacaacacctggctggacgccctgaccagagctgtgttt
gtggagtccactgtctacaacgccaacgtcaacctgttctgcattgtcacgctgacgcta
gagaccagcgctctgggcaccttttttacgcacgcggccctgcagagcctccgcctgtac
cccttcaccgacggctggcaccccttcgtggtagcggcagagctcatctacttcctcttc
ctcctctactacatggtggtgcagggcaagcgcatgagtaaagagacgtggggctatttc
tgcagcaagtggaaccttctggagctggccatcatcctggccagctggagcgccctggcg
gtgtttgtgaagagggctgtcctggccgaaagggacctccagcgctgccggaaccacagg
gaggaaggcatcagcttcagtgagacagcagcagccgatgccgcccttggctacatcatt
gccttcctggtactcctgtccacagtgaagctttggcatctgctcaggttgaatcccaaa
atgaacatgatcacggcagccctacgccgtgcctggggcgacatttcaggctttatgatt
gtcatccttaccatgctcctggcttactccatcgcgtcaaacttgatatttggttggaaa
ctccgttcctacaaaaccctctttgatgcggcggagacgatggtcagccttcagctggga
atcttcaactacgaggaggtcctggactatagcccagtgcttggctccttcctcattgga
tcctgcattgtttttatgacatttgtggtgctgaacctgtttatctctgtcatcctggtg
gccttcagtgaggagcaaaaatactatcagctgtcggaggaaggggagatcgtagatttg
ctgctgatgaaaatactcagtttcctgggcattaagtctaagagagaggagcctggaagc
agcagggagcagcctgggtctctgtcccagactcgccactctcgaccagcacaagctttg
cccaaggactaa
DBGET
integrated database retrieval system